RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 NDUFA12Q9UI09 145 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 HSPB11Q9Y547 144 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 PRKDCP78527 4128 aaKnown RBP-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 COL12A1Q99715 3063 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 DSPP15924 2871 aaKnown RBP-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 FAT3Q8TDW7 4589 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 MYH8P13535 1937 aa-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 PRRC2CQ9Y520 2896 aaKnown RBP-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 VPS13DQ5THJ4 4388 aa-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 APOC4-APOC2K7ER74 178 aa-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 NPFFO15130 113 aa-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 SMIM6P0DI80 62 aa-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 LSM2Q9Y333 95 aaKnown RBP-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 C10orf71Q711Q0 1435 aa-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 LRRC37A3O60309 1634 aa-1.07□□□□□ -2.58
SMARCA5-203ENST00000515531 BAGE3Q86Y29 109 aa-1.08□□□□□ -2.58
SMARCA5-203ENST00000515531 RPRMQ9NS64 109 aa-1.08□□□□□ -2.58
SMARCA5-203ENST00000515531 HIGD1AQ9Y241 93 aa-1.08□□□□□ -2.58
SMARCA5-203ENST00000515531 GINS2Q9Y248 185 aa-1.08□□□□□ -2.58
SMARCA5-203ENST00000515531 ERCC6Q03468 1493 aa-1.08□□□□□ -2.58
SMARCA5-203ENST00000515531 WDR87Q6ZQQ6 2873 aa-1.08□□□□□ -2.58
SMARCA5-203ENST00000515531 TSC2P49815 1807 aa-1.09□□□□□ -2.58
SMARCA5-203ENST00000515531 SPRR2AP35326 72 aa-1.09□□□□□ -2.58
SMARCA5-203ENST00000515531 UBE2D1P51668 147 aa-1.09□□□□□ -2.58
SMARCA5-203ENST00000515531 SPANXN1Q5VSR9 72 aa-1.09□□□□□ -2.58
SMARCA5-203ENST00000515531 VSTM2AQ8TAG5 236 aa-1.09□□□□□ -2.58
SMARCA5-203ENST00000515531 SCN3BQ9NY72 215 aa-1.09□□□□□ -2.58
SMARCA5-203ENST00000515531 CNOT1A5YKK6 2376 aaKnown RBP-1.1□□□□□ -2.58
SMARCA5-203ENST00000515531 ANK3Q12955 4377 aaKnown RBP-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 USP9XQ93008 2570 aaPredicted RBP-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 FAM92AA1XBS5 289 aa-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 K7EQZ3 153 aa-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 S100A3P33764 101 aa-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 DCDP81605 110 aaKnown RBP-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 CFAP126Q5VTH2 177 aa-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 RPL7L1Q6DKI1 246 aaKnown RBP-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 NPVFQ9HCQ7 196 aa-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 CUBNO60494 3623 aa-1.1□□□□□ -2.59
SMARCA5-203ENST00000515531 CDK5RAP2Q96SN8 1893 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 PKD1P98161 4303 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 TRBV20-1A0A075B6N2 111 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 CLPSL1A2RUU4 121 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 IFNA17P01571 189 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 SPANXCQ9NY87 97 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 TACC2O95359 2948 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 MYH6P13533 1939 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 LRP6O75581 1613 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 LAMC1P11047 1609 aa-1.11□□□□□ -2.59
SMARCA5-203ENST00000515531 VPS13BQ7Z7G8 4022 aa-1.12□□□□□ -2.59
SMARCA5-203ENST00000515531 LAMA1P25391 3075 aa-1.12□□□□□ -2.59
SMARCA5-203ENST00000515531 A6NIN4 97 aa-1.12□□□□□ -2.59
SMARCA5-203ENST00000515531 C9orf116Q5BN46 136 aaPredicted RBP-1.12□□□□□ -2.59
SMARCA5-203ENST00000515531 C10orf82Q8WW14 230 aa-1.12□□□□□ -2.59
SMARCA5-203ENST00000515531 TP53AIP1Q9HCN2 124 aa-1.12□□□□□ -2.59
SMARCA5-203ENST00000515531 ERCC6L2Q5T890 1561 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 LOC730098B7Z3J9 87 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 BCE1O60756 84 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 PIRTP0C851 137 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 NCS1P62166 190 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 KLK9Q2XQG4 91 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 SAR1AQ9NR31 198 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 PRDM2Q13029 1718 aa-1.13□□□□□ -2.59
SMARCA5-203ENST00000515531 CMYA5Q8N3K9 4069 aa-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 DAPK1P53355 1430 aa-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 NWD2Q9ULI1 1742 aa-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 ANKRD11Q6UB99 2663 aaPredicted RBP-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 TEX15Q9BXT5 2789 aa-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 FXYD6-FXYD2A0A087WZ82 144 aa-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 H0YJX3 145 aa-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 CCDC153Q494R4 210 aa-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 DYNC1H1Q14204 4646 aaKnown RBP-1.14□□□□□ -2.59
SMARCA5-203ENST00000515531 LRRC37A2A6NM11 1700 aa-1.15□□□□□ -2.59
SMARCA5-203ENST00000515531 ZNF818PQ6ZRF7 136 aa-1.15□□□□□ -2.59
SMARCA5-203ENST00000515531 SPTBN4Q9H254 2564 aa-1.15□□□□□ -2.59
SMARCA5-203ENST00000515531 SYNJ1O43426 1573 aa-1.16□□□□□ -2.59
SMARCA5-203ENST00000515531 AKAP13Q12802 2813 aa-1.16□□□□□ -2.6
SMARCA5-203ENST00000515531 MIC13Q5XKP0 118 aa-1.16□□□□□ -2.6
SMARCA5-203ENST00000515531 MMGT1Q8N4V1 131 aa-1.16□□□□□ -2.6
SMARCA5-203ENST00000515531 SPRR2FQ96RM1 72 aa-1.16□□□□□ -2.6
SMARCA5-203ENST00000515531 PCNX1Q96RV3 2341 aa-1.16□□□□□ -2.6
SMARCA5-203ENST00000515531 PAPPAQ13219 1627 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 TRBV6-1A0A0K0K1D8 114 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 I3L2K1 104 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 DBIP07108 87 aaKnown RBP-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 UBE2G1P62253 170 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 HAMPP81172 84 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 SPAG11AQ6PDA7 123 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 CTAGE3PQ8IX95 158 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 SPANXA1Q9NS26 97 aa-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 URB1O60287 2271 aaKnown RBP-1.17□□□□□ -2.6
SMARCA5-203ENST00000515531 PXDNQ92626 1479 aa-1.18□□□□□ -2.6
SMARCA5-203ENST00000515531 PI4KAP42356 2102 aa-1.18□□□□□ -2.6
SMARCA5-203ENST00000515531 CCL18P55774 89 aa-1.18□□□□□ -2.6
SMARCA5-203ENST00000515531 SMIM4Q8WVI0 70 aa-1.18□□□□□ -2.6
SMARCA5-203ENST00000515531 SELENOSQ9BQE4 189 aa-1.18□□□□□ -2.6
SMARCA5-203ENST00000515531 AKAP9Q99996 3911 aa-1.18□□□□□ -2.6
SMARCA5-203ENST00000515531 COL6A5A8TX70 2615 aa-1.19□□□□□ -2.6
SMARCA5-203ENST00000515531 ADGRB1O14514 1584 aa-1.19□□□□□ -2.6
SMARCA5-203ENST00000515531 PIPP12273 146 aaPredicted RBP-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms