RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 NWD2Q9ULI1 1742 aa0.67□□□□□ -2.3
RNF4-219ENST00000513450 ZFHX3Q15911 3703 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 LAMC3Q9Y6N6 1575 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 PPIP5K1Q6PFW1 1433 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 NSD3Q9BZ95 1437 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 PRDM15P57071 1507 aaPredicted RBP0.66□□□□□ -2.3
RNF4-219ENST00000513450 CDK13Q14004 1512 aaKnown RBP0.66□□□□□ -2.3
RNF4-219ENST00000513450 TRBV7-3A0A075B6L6 115 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 TRBV7-1A0A0A6YYK4 115 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 HIGD1CA8MV81 97 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 H3BQF6 201 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 LINC00032P0C843 101 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 ATP5EP56381 51 aaPredicted RBP0.66□□□□□ -2.3
RNF4-219ENST00000513450 ELOF1P60002 83 aaKnown RBP0.66□□□□□ -2.3
RNF4-219ENST00000513450 SEC11AP67812 179 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 SPATA45Q537H7 98 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 C10orf128Q5T292 105 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 SFTA2Q6UW10 78 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 ZNF818PQ6ZRF7 136 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 CYP4F30PQ9H0H9 118 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 TMEM14CQ9P0S9 112 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 MARF1Q9Y4F3 1742 aaKnown RBP0.66□□□□□ -2.3
RNF4-219ENST00000513450 GAPVD1Q14C86 1478 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 FYCO1Q9BQS8 1478 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 TCHHQ07283 1943 aa0.66□□□□□ -2.3
RNF4-219ENST00000513450 BAZ1AQ9NRL2 1556 aaPredicted RBP0.66□□□□□ -2.3
RNF4-219ENST00000513450 E9PCH4 1651 aa0.65□□□□□ -2.3
RNF4-219ENST00000513450 CACNA1BQ00975 2339 aa0.65□□□□□ -2.3
RNF4-219ENST00000513450 TECTAO75443 2155 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 TRBV6-7A0A0A0MS04 114 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 TRBV7-7A0A0K0K1E9 115 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 H7BZZ5 65 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 K7EP34 96 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 APOC3P02656 99 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 TRAPPC2P0DI81 140 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 TRAPPC2BP0DI82 140 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 FAUP35544 74 aaKnown RBP0.65□□□□□ -2.31
RNF4-219ENST00000513450 UBE2D3P61077 147 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 UBE2D2P62837 147 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 ZNF56Q15929 161 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 GDF5OSQ5U4N7 250 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 CYP2G1PQ6ZSU1 146 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 COX7B2Q8TF08 81 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 LCN9Q8WX39 176 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 Q96NJ1 140 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 MANBALQ9NQG1 85 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 NDUFA4L2Q9NRX3 87 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 HIGD1BQ9P298 99 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 AP4S1Q9Y587 144 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 ZNF236Q9UL36 1845 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 MYO7BQ6PIF6 2116 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 ASCC3Q8N3C0 2202 aaKnown RBP0.65□□□□□ -2.31
RNF4-219ENST00000513450 LOC285556D6RIA3 1793 aa0.65□□□□□ -2.31
RNF4-219ENST00000513450 KDM5DQ9BY66 1539 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 MYO7AQ13402 2215 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.64□□□□□ -2.31
RNF4-219ENST00000513450 A0A0G2JND7 137 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 CRYM-AS1A6NIL9 109 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 CHKB-CPT1BH3BT56 60 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 SFT2D2O95562 160 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 ASIPP42127 132 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 EDDM3BP56851 147 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 SSBP1Q04837 148 aaKnown RBP0.64□□□□□ -2.31
RNF4-219ENST00000513450 XAF1Q6GPH4 301 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 FAM223AQ8IWN6 122 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 Q8N6K4 173 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 MYOZ3Q8TDC0 251 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 FAM167A-AS1Q96KT0 104 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 CDC42SE2Q9NRR3 84 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 BET1LQ9NYM9 111 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 CCDC18Q5T9S5 1454 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 NRXN1Q9ULB1 1477 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 ARHGEF5Q12774 1597 aa0.64□□□□□ -2.31
RNF4-219ENST00000513450 FLG2Q5D862 2391 aaPredicted RBP0.64□□□□□ -2.31
RNF4-219ENST00000513450 RGPD4Q7Z3J3 1758 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 MRC1P22897 1456 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 F5P12259 2224 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 IGLV3-32A0A0A0MS00 114 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 PIGBOS1A0A0B4J2F0 54 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 A0A1W2PPM0 123 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 NAP1L6A6NFF2 107 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 SYS1-DBNDD2H3BUS1 97 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 ATOX1O00244 68 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 HMGN4O00479 90 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 PPP1R17O96001 155 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 KRTAP10-4P60372 401 aaPredicted RBP0.63□□□□□ -2.31
RNF4-219ENST00000513450 ALKAL2Q6UX46 152 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 Q86TA4 180 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 SERP2Q8N6R1 65 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 CCL19Q99731 98 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 MGST2Q99735 147 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 CACFD1Q9UGQ2 172 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 SNURFQ9Y675 71 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 RP1L1Q8IWN7 2480 aaPredicted RBP0.63□□□□□ -2.31
RNF4-219ENST00000513450 UBR1Q8IWV7 1749 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 HMGXB3Q12766 1538 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 ZMYM4Q5VZL5 1548 aa0.63□□□□□ -2.31
RNF4-219ENST00000513450 BLMP54132 1417 aaPredicted RBP0.63□□□□□ -2.31
RNF4-219ENST00000513450 RGPD3A6NKT7 1758 aaPredicted RBP0.62□□□□□ -2.31
RNF4-219ENST00000513450 SIPA1L3O60292 1781 aaPredicted RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms