RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 LAMC3Q9Y6N6 1575 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 PLIN4Q96Q06 1357 aa1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 MYO18AQ92614 2054 aaKnown RBP1.08□□□□□ -2.24
DEPDC1B-204ENST00000509006 TCHHQ07283 1943 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 GOLGA3Q08378 1498 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 PRDM2Q13029 1718 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 MARF1Q9Y4F3 1742 aaKnown RBP1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 EPRSP07814 1512 aaKnown RBP1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 CHKB-CPT1BH3BT56 60 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 NCR3O14931 201 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 CYB5AP00167 134 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 UQCRHP07919 91 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 UBE2D3P61077 147 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 UBE2D2P62837 147 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 SPINK13Q1W4C9 94 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 C10orf99Q6UWK7 81 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 BAGE3Q86Y29 109 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 C5orf56Q8N8D9 126 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 SMIM4Q8WVI0 70 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 NPVFQ9HCQ7 196 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 TMEM14BQ9NUH8 114 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 PATJQ8NI35 1801 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 ZGRF1Q86YA3 2104 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 FREM1Q5H8C1 2179 aa1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 TNRC6AQ8NDV7 1962 aaKnown RBP1.07□□□□□ -2.24
DEPDC1B-204ENST00000509006 ICE1Q9Y2F5 2266 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 NRXN2Q9P2S2 1712 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 ARHGAP35Q9NRY4 1499 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 MLH3Q9UHC1 1453 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 MUC22E2RYF6 1773 aaPredicted RBP1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 PARP14Q460N5 1801 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 PHIPQ8WWQ0 1821 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 DOCK2Q92608 1830 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 TRBV30A0A0K0K1B3 111 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 SYS1-DBNDD2H3BUS1 97 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 K7EP34 96 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 SAA2P0DJI9 122 aaPredicted RBP1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 COX17Q14061 63 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 PMCHL1Q16048 86 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 ZNF720Q7Z2F6 126 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 Q8N6K4 173 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 S100A16Q96FQ6 103 aaKnown RBP1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 PRO1933Q9H354 126 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 RREB1Q92766 1687 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 CR1P17927 2039 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 PCNX2A6NKB5 2137 aa1.06□□□□□ -2.24
DEPDC1B-204ENST00000509006 FANCAO15360 1455 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 ATP10BO94823 1461 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 IQSEC2Q5JU85 1478 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 ABCC2Q92887 1545 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 CTTNBP2Q8WZ74 1663 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 NBDYA0A0U1RRE5 68 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 KANTRA0A1W2PQU2 76 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 TMEM14DPA8MWL7 114 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 F2Z2F3 143 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 UQCR11O14957 56 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 ADIRFQ15847 76 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 VMO1Q7Z5L0 202 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 FAM213BQ8TBF2 198 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 ZCCHC13Q8WW36 166 aaKnown RBP1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 OBSCN-AS1Q96MR7 158 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 CCL19Q99731 98 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 NXT2Q9NPJ8 142 aaKnown RBP1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 NDUFA4L2Q9NRX3 87 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 LINC00474Q9P2X8 69 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 DOCK10Q96BY6 2186 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 UNC13CQ8NB66 2214 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 TNRC6BQ9UPQ9 1833 aaKnown RBP1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 GBF1Q92538 1859 aa1.05□□□□□ -2.24
DEPDC1B-204ENST00000509006 UNC13BO14795 1591 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 DIP2CQ9Y2E4 1556 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 TANC1Q9C0D5 1861 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 TRBV25-1A0A075B6N4 114 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 TRAV22A0A0B4J277 110 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 A0A1W2PPM0 123 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 ZNF815PA8K554 130 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 F8VRH5 84 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 J3QKU1 62 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 HMGN4O00479 90 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 EFNA4P52798 201 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 HMGN3Q15651 99 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 PCOTHQ58A44 107 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 BAGE2Q86Y30 109 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 LINC00208Q96KT6 92 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 CDC42SE2Q9NRR3 84 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 EXPH5Q8NEV8 1989 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 FBN3Q75N90 2809 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 CEP162Q5TB80 1403 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 ARFGEF3Q5TH69 2177 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 MAGI2Q86UL8 1455 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 SHROOM2Q13796 1616 aa1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 KDM5AP29375 1690 aaKnown RBP1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 CLTCQ00610 1675 aaKnown RBP1.04□□□□□ -2.24
DEPDC1B-204ENST00000509006 CHD1O14646 1710 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 PEAK1Q9H792 1746 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 BAHCC1Q9P281 2608 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 KIAA0100Q14667 2235 aaKnown RBP1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 CTXND1A0A1B0GTU2 59 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 ACYP1P07311 99 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms