RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 COX11Q9Y6N1 276 aa1.97□□□□□ -2.09
TCOF1-208ENST00000506063 A0A087WWL8 130 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 A0A087WX48 190 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 IGKV3D-20A0A0C4DH25 116 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 TRBV10-1A0A0K0K1A3 114 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GAGE12JA6NER3 117 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 USP17L23D6RBM5 183 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 F5H697 171 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GNRH2O43555 120 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 SNAI2O43623 268 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 OR5AL1P0C617 328 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 ARMS2P0C7Q2 107 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 CTRLP40313 264 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 RAB14P61106 215 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 RPL19P84098 196 aaKnown RBP1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GAGE1Q13065 139 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GAGE4Q13068 117 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GAGE5Q13069 117 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 KRTAP19-6Q3LI70 58 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GAGE13Q4V321 117 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM97Q5BJF2 176 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 CT83Q5H943 113 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 DNLZQ5SXM8 178 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 COX8CQ7Z4L0 72 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 C15orf54Q8N8G6 183 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 SLC25A29Q8N8R3 303 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 OR10AG1Q8NH19 301 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GTSF1Q8WW33 167 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 SSBP4Q9BWG4 385 aaPredicted RBP1.96□□□□□ -2.1
TCOF1-208ENST00000506063 GTSF1LQ9H1H1 148 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 C11orf21Q9P2W6 132 aa1.96□□□□□ -2.1
TCOF1-208ENST00000506063 IGLV1-50A0A075B6I6 118 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 TRBV7-3A0A075B6L6 115 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 TRBV25-1A0A075B6N4 114 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 IGKV2D-24A0A075B6R9 120 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 PGPEP1LA6NFU8 196 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 ZNF727A8MUV8 499 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 F2Z2F3 143 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 UBE2L6O14933 153 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 GATCO43716 136 aaKnown RBP1.95□□□□□ -2.1
TCOF1-208ENST00000506063 NDUFS6O75380 124 aaKnown RBP1.95□□□□□ -2.1
TCOF1-208ENST00000506063 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 RAB4BP61018 213 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 SSTP61278 116 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 PEA15Q15121 130 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 ELOBQ15370 118 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 ADIRFQ15847 76 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 FAM74A3Q4VXF1 159 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 C14orf177Q52M58 125 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 SFRP2Q96HF1 295 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 FAM210AQ96ND0 272 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 CHCHD7Q9BUK0 85 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 MLST8Q9BVC4 326 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 KRTAP9-8Q9BYQ0 159 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
TCOF1-208ENST00000506063 TRBV20OR9-2A0A075B6H5 130 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 IGHV1-24A0A0C4DH33 117 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 MUC21A0A140T8X8 626 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 A0A1B0GVG6 124 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 RAB19A4D1S5 217 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 C19orf71A6NCJ1 209 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 A8MWL6 223 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 TSPAN13O95857 204 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 APCSP02743 223 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 S100A8P05109 93 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 IGLC6P0CF74 106 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 LINC00694P0DN24 101 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 GZMBP10144 247 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 AMTP48728 403 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 CRIP1P50238 77 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 SMAGPQ0VAQ4 97 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 COTL1Q14019 142 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 TWIST1Q15672 202 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 KRTAP26-1Q6PEX3 210 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 TEX261Q6UWH6 196 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 Q6ZRP5 223 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 FAM231DQ6ZW35 169 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 LINC01551Q86U37 167 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 C14orf178Q8N769 122 aaPredicted RBP1.94□□□□□ -2.1
TCOF1-208ENST00000506063 OR10G8Q8NGN5 311 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 CHCHD5Q9BSY4 110 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 C1orf43Q9BWL3 253 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 SAMD10Q9BYL1 202 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 RNASE7Q9H1E1 156 aaKnown RBP1.94□□□□□ -2.1
TCOF1-208ENST00000506063 SMDT1Q9H4I9 107 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 NAT8Q9UHE5 227 aa1.94□□□□□ -2.1
TCOF1-208ENST00000506063 TRBV6-8A0A0A6YYG3 113 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 A0A1B0GUT8 65 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 A0A1B0GW15 77 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 HIGD1CA8MV81 97 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 TMEM262E9PQX1 116 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 K7EN84 100 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 PPP1R17O96001 155 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 HLA-DQA1P01909 254 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 ANGP03950 147 aaKnown RBP1.93□□□□□ -2.1
TCOF1-208ENST00000506063 UBE2D3P61077 147 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 UBE2D2P62837 147 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 Q0VG73 95 aa1.93□□□□□ -2.1
TCOF1-208ENST00000506063 PNRC1Q12796 327 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms