RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 IL36BQ9NZH7 164 aa6.41□□□□□ -1.38
NEDD9-210ENST00000505589 PKHD1L1Q86WI1 4243 aa6.41□□□□□ -1.38
NEDD9-210ENST00000505589 RNASE3P12724 160 aaKnown RBP6.4□□□□□ -1.38
NEDD9-210ENST00000505589 ASIPP42127 132 aa6.4□□□□□ -1.38
NEDD9-210ENST00000505589 MIAQ16674 131 aa6.4□□□□□ -1.38
NEDD9-210ENST00000505589 TMEM97Q5BJF2 176 aa6.4□□□□□ -1.38
NEDD9-210ENST00000505589 Q8N3U1 123 aa6.4□□□□□ -1.38
NEDD9-210ENST00000505589 RNF185Q96GF1 192 aa6.4□□□□□ -1.38
NEDD9-210ENST00000505589 SAMD10Q9BYL1 202 aa6.4□□□□□ -1.38
NEDD9-210ENST00000505589 TRBV7-3A0A075B6L6 115 aa6.39□□□□□ -1.39
NEDD9-210ENST00000505589 TRBV24-1A0A075B6N3 115 aa6.39□□□□□ -1.39
NEDD9-210ENST00000505589 TRAV9-1A0A075B6T8 112 aa6.39□□□□□ -1.39
NEDD9-210ENST00000505589 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-210ENST00000505589 SMIM27A0A1W2PRY6 76 aa6.39□□□□□ -1.39
NEDD9-210ENST00000505589 COLCA2A8K830 154 aa6.39□□□□□ -1.39
NEDD9-210ENST00000505589 OR2D3Q8NGH3 330 aa6.39□□□□□ -1.39
NEDD9-210ENST00000505589 TSKUQ8WUA8 353 aa6.39□□□□□ -1.39
NEDD9-210ENST00000505589 FAM231BA6NCW3 169 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 A8MWL6 223 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
NEDD9-210ENST00000505589 BTF3L4Q96K17 158 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 GFRA4Q9GZZ7 299 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 AP5S1Q9NUS5 200 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 NAT8BQ9UHF3 227 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 PHLDA3Q9Y5J5 127 aa6.38□□□□□ -1.39
NEDD9-210ENST00000505589 TRBV6-8A0A0A6YYG3 113 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 TGIF2-C20orf24A0A0A6YYL0 155 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 XKRY2A2RUG3 117 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 USP17L23D6RBM5 183 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 ANGP03950 147 aaKnown RBP6.37□□□□□ -1.39
NEDD9-210ENST00000505589 CXCL1P09341 107 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 DNLZQ5SXM8 178 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 UFSP1Q6NVU6 142 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 C14orf178Q8N769 122 aaPredicted RBP6.37□□□□□ -1.39
NEDD9-210ENST00000505589 C7orf33Q8WU49 177 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 GTSF1Q8WW33 167 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
NEDD9-210ENST00000505589 TMSB15BA0A087X1C1 80 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 HIGD1CA8MV81 97 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 HLA-DQA1P01909 254 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 PRSS1P07477 247 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 GZMBP10144 247 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 RAB5AP20339 215 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 HNRNPA3P51991 378 aaKnown RBP6.36□□□□□ -1.39
NEDD9-210ENST00000505589 FAM74A4Q5TZK3 123 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 ENHOQ6UWT2 76 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 SDIM1Q6ZPB5 146 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 NUP35Q8NFH5 326 aa6.36□□□□□ -1.39
NEDD9-210ENST00000505589 TNXBP22105 4242 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 IGKV3D-20A0A0C4DH25 116 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 ARMS2P0C7Q2 107 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 CTRLP40313 264 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 UBE2D3P61077 147 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 UBE2D2P62837 147 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 ATP5L2Q7Z4Y8 100 aa6.35□□□□□ -1.39
NEDD9-210ENST00000505589 IGHV3-64A0A075B6Q5 118 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 TRAV8-4A0A0B4J246 113 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 FOXA3P55318 350 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-210ENST00000505589 RAB4BP61018 213 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
NEDD9-210ENST00000505589 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
NEDD9-210ENST00000505589 ZFP82Q8N141 532 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 CHCHD5Q9BSY4 110 aa6.34□□□□□ -1.39
NEDD9-210ENST00000505589 A0A1B0GXF2 115 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 COX19Q49B96 90 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
NEDD9-210ENST00000505589 WDR73Q6P4I2 378 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 RASL11AQ6T310 242 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 FER1L6-AS1Q8NA97 138 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 BORCS7Q96B45 105 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 TPPP3Q9BW30 176 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 JPT2Q9H910 190 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 Q9UF83 564 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.33□□□□□ -1.4
NEDD9-210ENST00000505589 LRP2P98164 4655 aa6.33□□□□□ -1.4
NEDD9-210ENST00000505589 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 A0A1B0GW15 77 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 F2Z2F3 143 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 H3BVH4 76 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 MT-ND6P03923 174 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 RPS10P46783 165 aaKnown RBP6.32□□□□□ -1.4
NEDD9-210ENST00000505589 HBBP68871 147 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 MPV17L2Q567V2 206 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 REG3GQ6UW15 175 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 LYZL1Q6UWQ5 148 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 PRR34Q9NV39 138 aa6.32□□□□□ -1.4
NEDD9-210ENST00000505589 TRBV25-1A0A075B6N4 114 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 A0A087WWL8 130 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 A0A087WYN8 130 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 hDV102S1A0JD36 115 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 M0R381 172 aa6.31□□□□□ -1.4
NEDD9-210ENST00000505589 SNAI2O43623 268 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms