RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 C9orf85Q96MD7 179 aa9.92□□□□□ -0.82
LETM1-203ENST00000505551 LITAFQ99732 161 aa9.92□□□□□ -0.82
LETM1-203ENST00000505551 IGHV4OR15-8A0A075B7B6 117 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 A0A087WW49 117 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 hADV29S1A0JD25 119 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 C19orf84I3L1E1 186 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 MED14OSP0DP75 135 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 LINC00482Q8N8I6 264 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 NPBQ8NG41 125 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 FAM19A4Q96LR4 140 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 DSCR8Q96T75 97 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 POLQO75417 2590 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 CXCL5P42830 114 aa9.91□□□□□ -0.82
LETM1-203ENST00000505551 EPG5Q9HCE0 2579 aa9.9□□□□□ -0.82
LETM1-203ENST00000505551 HIST2H2BCQ6DN03 193 aa9.9□□□□□ -0.82
LETM1-203ENST00000505551 HIST2H2BDQ6DRA6 164 aa9.9□□□□□ -0.82
LETM1-203ENST00000505551 EEF1AKMT3Q96AZ1 226 aa9.9□□□□□ -0.82
LETM1-203ENST00000505551 PHLDA3Q9Y5J5 127 aa9.9□□□□□ -0.82
LETM1-203ENST00000505551 DCANP1Q8TF63 244 aa9.9□□□□□ -0.83
LETM1-203ENST00000505551 CYSTM1Q9H1C7 97 aa9.9□□□□□ -0.83
LETM1-203ENST00000505551 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.83
LETM1-203ENST00000505551 IGHV1-69P01742 117 aa9.89□□□□□ -0.83
LETM1-203ENST00000505551 LINC00315P59091 139 aa9.89□□□□□ -0.83
LETM1-203ENST00000505551 KIF25-AS1Q9Y6Z4 181 aa9.89□□□□□ -0.83
LETM1-203ENST00000505551 IGHV3-35A0A0C4DH35 117 aa9.89□□□□□ -0.83
LETM1-203ENST00000505551 I3L3M4 83 aa9.89□□□□□ -0.83
LETM1-203ENST00000505551 OVOL1O14753 267 aa9.89□□□□□ -0.83
LETM1-203ENST00000505551 S100A4P26447 101 aaKnown RBP9.89□□□□□ -0.83
LETM1-203ENST00000505551 LRRK2Q5S007 2527 aa9.88□□□□□ -0.83
LETM1-203ENST00000505551 VCYO14598 125 aa9.88□□□□□ -0.83
LETM1-203ENST00000505551 HIST1H4AP62805 103 aaKnown RBP9.88□□□□□ -0.83
LETM1-203ENST00000505551 NDPQ00604 133 aa9.88□□□□□ -0.83
LETM1-203ENST00000505551 ZNF462Q96JM2 2506 aa9.88□□□□□ -0.83
LETM1-203ENST00000505551 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
LETM1-203ENST00000505551 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
LETM1-203ENST00000505551 NXPH4O95158 308 aa9.87□□□□□ -0.83
LETM1-203ENST00000505551 WFDC11Q8NEX6 87 aa9.87□□□□□ -0.83
LETM1-203ENST00000505551 IGHV3-64A0A075B6Q5 118 aa9.87□□□□□ -0.83
LETM1-203ENST00000505551 IGF1P05019 195 aa9.87□□□□□ -0.83
LETM1-203ENST00000505551 APRG1Q8IVJ8 170 aa9.87□□□□□ -0.83
LETM1-203ENST00000505551 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
LETM1-203ENST00000505551 TRAV8-3A0A0A6YYJ7 113 aa9.86□□□□□ -0.83
LETM1-203ENST00000505551 TRAV21A0A0B4J279 112 aa9.86□□□□□ -0.83
LETM1-203ENST00000505551 IGHV3-66A0A0C4DH42 116 aa9.86□□□□□ -0.83
LETM1-203ENST00000505551 AVPP01185 164 aa9.86□□□□□ -0.83
LETM1-203ENST00000505551 USP24Q9UPU5 2620 aa9.86□□□□□ -0.83
LETM1-203ENST00000505551 ZFP36P26651 326 aaKnown RBP9.86□□□□□ -0.83
LETM1-203ENST00000505551 Q6ZSV7 163 aa9.86□□□□□ -0.83
LETM1-203ENST00000505551 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
LETM1-203ENST00000505551 USP9YO00507 2555 aaPredicted RBP9.86□□□□□ -0.83
LETM1-203ENST00000505551 TRBV27A0A0K0K1C4 114 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 C11orf71Q6IPW1 123 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 TMEM61Q8N0U2 210 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 ITLN2Q8WWU7 325 aaPredicted RBP9.85□□□□□ -0.83
LETM1-203ENST00000505551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.85□□□□□ -0.831e-9■■■■■ 36.7
LETM1-203ENST00000505551 NACAE9PAV3 2078 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 ATOX1O00244 68 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
LETM1-203ENST00000505551 NSUN5P1Q3KNT7 163 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 PEMTQ9UBM1 199 aa9.85□□□□□ -0.83
LETM1-203ENST00000505551 MIAQ16674 131 aa9.84□□□□□ -0.83
LETM1-203ENST00000505551 SUMO4Q6EEV6 95 aa9.84□□□□□ -0.83
LETM1-203ENST00000505551 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
LETM1-203ENST00000505551 MUC4Q99102 2169 aa9.84□□□□□ -0.83
LETM1-203ENST00000505551 TRACP01848 142 aa9.84□□□□□ -0.83
LETM1-203ENST00000505551 PRSS2P07478 247 aa9.84□□□□□ -0.83
LETM1-203ENST00000505551 IGHV3-30-3P0DP02 117 aa9.84□□□□□ -0.83
LETM1-203ENST00000505551 TMEM258P61165 79 aa9.84□□□□□ -0.83
LETM1-203ENST00000505551 TIMM21Q9BVV7 248 aa9.84□□□□□ -0.84
LETM1-203ENST00000505551 TRBV6-5A0A0K0K1A5 114 aa9.83□□□□□ -0.84
LETM1-203ENST00000505551 C10orf105Q8TEF2 133 aa9.83□□□□□ -0.84
LETM1-203ENST00000505551 IGHV3OR16-13A0A075B7E8 117 aa9.83□□□□□ -0.84
LETM1-203ENST00000505551 TRBV7-1A0A0A6YYK4 115 aa9.83□□□□□ -0.84
LETM1-203ENST00000505551 IGHV3-74A0A0B4J1X5 117 aa9.83□□□□□ -0.84
LETM1-203ENST00000505551 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
LETM1-203ENST00000505551 ADARB2-AS1A8MUL3 147 aa9.83□□□□□ -0.84
LETM1-203ENST00000505551 PRB1P04280 392 aa9.82□□□□□ -0.84
LETM1-203ENST00000505551 RHOHQ15669 191 aa9.82□□□□□ -0.84
LETM1-203ENST00000505551 DOPEY1Q5JWR5 2465 aa9.82□□□□□ -0.84
LETM1-203ENST00000505551 PRRC2AP48634 2157 aaKnown RBP9.82□□□□□ -0.84
LETM1-203ENST00000505551 GNRH2O43555 120 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 DPM3Q9P2X0 92 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 CSPG4Q6UVK1 2322 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 IGHV3OR16-10A0A075B7F0 116 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 VMO1Q7Z5L0 202 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 DAND5Q8N907 189 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 BPESC1Q9GZL8 116 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 U3KQE9 123 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 ZANQ9Y493 2812 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 ABCA12Q86UK0 2595 aa9.81□□□□□ -0.84
LETM1-203ENST00000505551 C9orf139Q6ZV77 190 aa9.8□□□□□ -0.84
LETM1-203ENST00000505551 LY6G5BQ8NDX9 201 aa9.8□□□□□ -0.84
LETM1-203ENST00000505551 C16orf92Q96LL3 132 aa9.8□□□□□ -0.84
LETM1-203ENST00000505551 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
LETM1-203ENST00000505551 RNASE4P34096 147 aaKnown RBP9.8□□□□□ -0.84
LETM1-203ENST00000505551 C15orf32Q32M92 178 aa9.8□□□□□ -0.84
LETM1-203ENST00000505551 BRK1Q8WUW1 75 aa9.8□□□□□ -0.84
LETM1-203ENST00000505551 IGHV3-49A0A0A0MS15 119 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms