RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 RNF5Q99942 180 aa1.73□□□□□ -2.13
LINC01088-202ENST00000505149 NMES1Q9C002 83 aa1.73□□□□□ -2.13
LINC01088-202ENST00000505149 AHDC1Q5TGY3 1603 aaPredicted RBP1.73□□□□□ -2.13
LINC01088-202ENST00000505149 RGPD4Q7Z3J3 1758 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 ANAPC1Q9H1A4 1944 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 SNRNP200O75643 2136 aaKnown RBP1.72□□□□□ -2.13
LINC01088-202ENST00000505149 TRBV6-8A0A0A6YYG3 113 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 SAA2P0DJI9 122 aaPredicted RBP1.72□□□□□ -2.13
LINC01088-202ENST00000505149 ERHP84090 104 aaKnown RBP1.72□□□□□ -2.13
LINC01088-202ENST00000505149 DEFB113Q30KQ7 82 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 CLECL1Q8IZS7 167 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 Q8TAT8 98 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 KLF14Q8TD94 323 aaPredicted RBP1.72□□□□□ -2.13
LINC01088-202ENST00000505149 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 UBE2D4Q9Y2X8 147 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 TANC2Q9HCD6 1990 aa1.72□□□□□ -2.13
LINC01088-202ENST00000505149 SHANK3Q9BYB0 1731 aa1.71□□□□□ -2.13
LINC01088-202ENST00000505149 TSPOAP1O95153 1857 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 MYO5AQ9Y4I1 1855 aaKnown RBP1.71□□□□□ -2.14
LINC01088-202ENST00000505149 THADAQ6YHU6 1953 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 SHROOM2Q13796 1616 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 IGKV3D-11A0A0A0MRZ8 115 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 LOC101927531A0A1B0GV80 90 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 ODF3BA8MYP8 253 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 D6R8Y8 96 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 HCRTO43612 131 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 IGKV4-1P06312 121 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 ELOF1P60002 83 aaKnown RBP1.71□□□□□ -2.14
LINC01088-202ENST00000505149 SSBP1Q04837 148 aaKnown RBP1.71□□□□□ -2.14
LINC01088-202ENST00000505149 NCBP2-AS2Q69YL0 99 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.71□□□□□ -2.14
LINC01088-202ENST00000505149 MUSTN1Q8IVN3 82 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 Q8NAQ8 132 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 SMIM4Q8WVI0 70 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 PROK2Q9HC23 129 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 KIDINS220Q9ULH0 1771 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 HEATR5AQ86XA9 2040 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 EHBP1L1Q8N3D4 1523 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 KIAA0586Q9BVV6 1533 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 ITSN2Q9NZM3 1697 aa1.71□□□□□ -2.14
LINC01088-202ENST00000505149 COL5A1P20908 1838 aaPredicted RBP1.7□□□□□ -2.14
LINC01088-202ENST00000505149 ATAD5Q96QE3 1844 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 MYO3AQ8NEV4 1616 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 BIVM-ERCC5R4GMW8 1640 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 RGPD3A6NKT7 1758 aaPredicted RBP1.7□□□□□ -2.14
LINC01088-202ENST00000505149 IGHV3OR16-8A0A075B7F1 116 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 TRAV12-1A0A0B4J245 112 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 A0A0J9YX75 114 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 A0A1B0GU33 70 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 LINC01549A6NIU2 74 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 HIGD1CA8MV81 97 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 HMGN4O00479 90 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 PSCAO43653 123 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 IGHV3-33P01772 117 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 ARMS2P0C7Q2 107 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 UBE2D1P51668 147 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 MYO9BQ13459 2157 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 DOCK1Q14185 1865 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 LYPD6Q86Y78 171 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 XRN1Q8IZH2 1706 aaKnown RBP1.7□□□□□ -2.14
LINC01088-202ENST00000505149 VWDEQ8N2E2 1590 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 TNS1Q9HBL0 1735 aaKnown RBP1.7□□□□□ -2.14
LINC01088-202ENST00000505149 NDUFA4L2Q9NRX3 87 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 ABRACLQ9P1F3 81 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 NWD2Q9ULI1 1742 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 SCN4AP35499 1836 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 PATJQ8NI35 1801 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 MROH2AA6NES4 1674 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 CPS1P31327 1500 aa1.7□□□□□ -2.14
LINC01088-202ENST00000505149 ATP7BP35670 1465 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 COL24A1Q17RW2 1714 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 ZFC3H1O60293 1989 aaKnown RBP1.69□□□□□ -2.14
LINC01088-202ENST00000505149 P0C880 135 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 SPAG11BQ08648 103 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 CSAG1Q6PB30 78 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 SPAG11AQ6PDA7 123 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 ZNF833PQ6ZTB9 187 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 KRTAP13-1Q8IUC0 172 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 ST20-AS1Q8NBB2 130 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 DMAC1Q96GE9 116 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 CMC2Q9NRP2 79 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 MRPL36Q9P0J6 103 aaKnown RBP1.69□□□□□ -2.14
LINC01088-202ENST00000505149 ORMDL1Q9P0S3 153 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 LENEPQ9Y5L5 61 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 CLTCQ00610 1675 aaKnown RBP1.69□□□□□ -2.14
LINC01088-202ENST00000505149 TRPM6Q9BX84 2022 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 KIAA0556O60303 1618 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 RGPD1P0DJD0 1748 aa1.69□□□□□ -2.14
LINC01088-202ENST00000505149 ANKRD12Q6UB98 2062 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 CFAP43Q8NDM7 1665 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 RGPD8O14715 1765 aaPredicted RBP1.68□□□□□ -2.14
LINC01088-202ENST00000505149 RGPD2P0DJD1 1756 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 RGPD5Q99666 1765 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 FBN1P35555 2871 aaKnown RBP1.68□□□□□ -2.14
LINC01088-202ENST00000505149 A0A1W2PNM2 257 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 C10orf142B7Z368 130 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 PLXNB1O43157 2135 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 PPP1R17O96001 155 aa1.68□□□□□ -2.14
LINC01088-202ENST00000505149 FCER1GP30273 86 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms