RNA–Protein interactions for RNA: ENST00000504994.1

HERC3-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-209ENST00000504994 TRBV7-3A0A075B6L6 115 aa1.42□□□□□ -2.18
HERC3-209ENST00000504994 SNCAP37840 140 aa1.42□□□□□ -2.18
HERC3-209ENST00000504994 MYOZ3Q8TDC0 251 aa1.42□□□□□ -2.18
HERC3-209ENST00000504994 SCAPERQ9BY12 1400 aa1.41□□□□□ -2.18
HERC3-209ENST00000504994 VPS8Q8N3P4 1428 aa1.4□□□□□ -2.18
HERC3-209ENST00000504994 PXDNQ92626 1479 aa1.4□□□□□ -2.19
HERC3-209ENST00000504994 MPC2O95563 127 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 ACYP2P14621 99 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 ZNF137PP52743 207 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 CCL18P55774 89 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 GNG2P59768 71 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 GNG11P61952 73 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 SPAG11BQ08648 103 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 SPINK9Q5DT21 86 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 COL5A1-AS1Q5SY13 56 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 C6orf52Q5T4I8 152 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 SPAG11AQ6PDA7 123 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 MGST2Q99735 147 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
HERC3-209ENST00000504994 PI4KAP42356 2102 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 TET3O43151 1660 aa1.39□□□□□ -2.19
HERC3-209ENST00000504994 ABCA3Q99758 1704 aa1.38□□□□□ -2.19
HERC3-209ENST00000504994 GVQW2A0A096LPI5 108 aaPredicted RBP1.38□□□□□ -2.19
HERC3-209ENST00000504994 H3BQ15 152 aa1.38□□□□□ -2.19
HERC3-209ENST00000504994 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.38□□□□□ -2.19
HERC3-209ENST00000504994 FAM213BQ8TBF2 198 aa1.38□□□□□ -2.19
HERC3-209ENST00000504994 NDUFA4L2Q9NRX3 87 aa1.38□□□□□ -2.19
HERC3-209ENST00000504994 LENEPQ9Y5L5 61 aa1.38□□□□□ -2.19
HERC3-209ENST00000504994 ARHGAP5Q13017 1502 aa1.38□□□□□ -2.19
HERC3-209ENST00000504994 MRC1P22897 1456 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 ZMYM4Q5VZL5 1548 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 TRAV1-2A0A0B4J238 106 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 F2Z2F3 143 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 FXYD6P3P58550 94 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 VMO1Q7Z5L0 202 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 SNHG12Q9BXW3 62 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 F5P12259 2224 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 KNTC1P50748 2209 aa1.37□□□□□ -2.19
HERC3-209ENST00000504994 A0A0D9SG42 100 aa1.36□□□□□ -2.19
HERC3-209ENST00000504994 SSC5DA1L4H1 1573 aa1.36□□□□□ -2.19
HERC3-209ENST00000504994 DPY30Q9C005 99 aa1.36□□□□□ -2.19
HERC3-209ENST00000504994 Q9H521 79 aa1.36□□□□□ -2.19
HERC3-209ENST00000504994 IFT172Q9UG01 1749 aa1.36□□□□□ -2.19
HERC3-209ENST00000504994 SCP2D1Q9UJQ7 156 aa1.36□□□□□ -2.19
HERC3-209ENST00000504994 R4GMQ9 66 aa1.36□□□□□ -2.19
HERC3-209ENST00000504994 PVALEFA0A1B0GWK0 134 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 LINC00032P0C843 101 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 UBA52P62987 128 aaKnown RBP1.35□□□□□ -2.19
HERC3-209ENST00000504994 BAGE3Q86Y29 109 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 SMIM11BQ8TCY0 68 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 BPESC1Q9GZL8 116 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 DYNLRB1Q9NP97 96 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 AP4S1Q9Y587 144 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 ZNF236Q9UL36 1845 aa1.35□□□□□ -2.19
HERC3-209ENST00000504994 ABCC5O15440 1437 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 hADV29S1A0JD25 119 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 TMEM14DPA8MWL7 114 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 CHKB-CPT1BH3BT56 60 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 M0R135 149 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 Q5VV11 94 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 Q6ZRX8 168 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 ABCC10Q5T3U5 1492 aa1.34□□□□□ -2.19
HERC3-209ENST00000504994 HMGN4O00479 90 aa1.33□□□□□ -2.2
HERC3-209ENST00000504994 GNGT2O14610 69 aa1.33□□□□□ -2.2
HERC3-209ENST00000504994 MT-ATP8P03928 68 aa1.33□□□□□ -2.2
HERC3-209ENST00000504994 V9GYH0 126 aa1.33□□□□□ -2.2
HERC3-209ENST00000504994 ZNF609O15014 1411 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 GOLGA3Q08378 1498 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 TRAV22A0A0B4J277 110 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 NAP1L6A6NFF2 107 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 Q0VG73 95 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 VAMP8Q9BV40 100 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 V9GYS6 101 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 CHD1O14646 1710 aa1.32□□□□□ -2.2
HERC3-209ENST00000504994 AKAP12Q02952 1782 aa1.31□□□□□ -2.2
HERC3-209ENST00000504994 CDK13Q14004 1512 aaKnown RBP1.31□□□□□ -2.2
HERC3-209ENST00000504994 KRTDAPP60985 99 aa1.31□□□□□ -2.2
HERC3-209ENST00000504994 FAM167A-AS1Q96KT0 104 aa1.31□□□□□ -2.2
HERC3-209ENST00000504994 MANBALQ9NQG1 85 aa1.31□□□□□ -2.2
HERC3-209ENST00000504994 TOPAZ1Q8N9V7 1692 aa1.3□□□□□ -2.2
HERC3-209ENST00000504994 CTXND1A0A1B0GTU2 59 aa1.3□□□□□ -2.2
HERC3-209ENST00000504994 IGLC7A0M8Q6 106 aa1.3□□□□□ -2.2
HERC3-209ENST00000504994 CDC42SE2Q9NRR3 84 aa1.3□□□□□ -2.2
HERC3-209ENST00000504994 OTOGLQ3ZCN5 2332 aa1.3□□□□□ -2.2
HERC3-209ENST00000504994 ASH1LQ9NR48 2969 aaKnown RBP1.29□□□□□ -2.2
HERC3-209ENST00000504994 G3V318 75 aa1.29□□□□□ -2.2
HERC3-209ENST00000504994 SEC11AP67812 179 aa1.29□□□□□ -2.2
HERC3-209ENST00000504994 AMELXQ99217 191 aa1.29□□□□□ -2.2
HERC3-209ENST00000504994 PRR15LQ9BU68 103 aa1.29□□□□□ -2.2
HERC3-209ENST00000504994 NSD3Q9BZ95 1437 aa1.29□□□□□ -2.2
HERC3-209ENST00000504994 CRYM-AS1A6NIL9 109 aa1.28□□□□□ -2.2
HERC3-209ENST00000504994 F8VRH5 84 aa1.28□□□□□ -2.2
HERC3-209ENST00000504994 CFAP126Q5VTH2 177 aa1.28□□□□□ -2.2
HERC3-209ENST00000504994 UQCR10Q9UDW1 63 aa1.28□□□□□ -2.2
HERC3-209ENST00000504994 KDM5AP29375 1690 aaKnown RBP1.28□□□□□ -2.2
HERC3-209ENST00000504994 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
HERC3-209ENST00000504994 KMT2BQ9UMN6 2715 aaPredicted RBP1.28□□□□□ -2.2
HERC3-209ENST00000504994 MYOM1P52179 1685 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 TEX14Q8IWB6 1497 aa1.27□□□□□ -2.21
HERC3-209ENST00000504994 LOC285095A0A1B0GVY8 99 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms