RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 KDM5DQ9BY66 1539 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 IGKV3D-7A0A0C4DH55 119 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 IGKV3OR2-268A0A0C4DH90 116 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 NBDYA0A0U1RRE5 68 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 SFT2D2O95562 160 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 TRAPPC2P0DI81 140 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 TRAPPC2BP0DI82 140 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 FXYD4P59646 89 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 Q5VV11 94 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 SFTA2Q6UW10 78 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 C20orf197Q8N268 126 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 AMELYQ99218 206 aa1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 PDCD11Q14690 1871 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-206ENST00000504751 SPAG17Q6Q759 2223 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 MED13LQ71F56 2210 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 RREB1Q92766 1687 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 TRBV7-3A0A075B6L6 115 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 TRBV7-1A0A0A6YYK4 115 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 TRBV7-7A0A0K0K1E9 115 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 CRYM-AS1A6NIL9 109 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 HIGD1CA8MV81 97 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 INE1O15225 51 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 APOC3P02656 99 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 ASIPP42127 132 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 PEA15Q15121 130 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 UNQ6190/PRO20217Q6UXQ8 127 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 ZNF818PQ6ZRF7 136 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 MANBALQ9NQG1 85 aa1.55□□□□□ -2.16
TRAPPC13-206ENST00000504751 LOC285556D6RIA3 1793 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 PPLO60437 1756 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 MYH4Q9Y623 1939 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 UQCRHLA0A096LP55 91 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 TRAV22A0A0B4J277 110 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 NAP1L6A6NFF2 107 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 M0R2N4 97 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 ATOX1O00244 68 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 CYB5AP00167 134 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 UQCRHP07919 91 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 ALKAL2Q6UX46 152 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 LINC00322Q6ZN03 302 aaPredicted RBP1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 CYP2G1PQ6ZSU1 146 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 TMEM14CQ9P0S9 112 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 NCOA6Q14686 2063 aaPredicted RBP1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 MYO7BQ6PIF6 2116 aa1.54□□□□□ -2.16
TRAPPC13-206ENST00000504751 LOC110117498A0A087WWA1 95 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 HCRTO43612 131 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 GYPAP02724 150 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 KRTDAPP60985 99 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 RPL37AP61513 92 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 CDK13Q14004 1512 aaKnown RBP1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 FXYD3Q14802 87 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 DEFB132Q7Z7B7 95 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 SERP2Q8N6R1 65 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 LINC00208Q96KT6 92 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 HIGD1BQ9P298 99 aa1.53□□□□□ -2.16
TRAPPC13-206ENST00000504751 ADGRB2O60241 1585 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 A0A0G2JND7 137 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 IGLC7A0M8Q6 106 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 CHKB-CPT1BH3BT56 60 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 H7BZZ5 65 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 CCL3L1P16619 93 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 SSBP1Q04837 148 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 ZNF56Q15929 161 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 SPATA45Q537H7 98 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 S100A16Q96FQ6 103 aaKnown RBP1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 OBSCN-AS1Q96MR7 158 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 CACFD1Q9UGQ2 172 aa1.52□□□□□ -2.17
TRAPPC13-206ENST00000504751 FLG2Q5D862 2391 aaPredicted RBP1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 ABCC3O15438 1527 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 A0A087WTM6 91 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 TRBV6-7A0A0A0MS04 114 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 ELOF1P60002 83 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 UBE2D3P61077 147 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 UBE2D2P62837 147 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 ZNF720Q7Z2F6 126 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 FAM223AQ8IWN6 122 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 Q8N6K4 173 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 C5orf56Q8N8D9 126 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 COX7B2Q8TF08 81 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 FAM167A-AS1Q96KT0 104 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 TRGV9Q99603 122 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 NXT2Q9NPJ8 142 aaKnown RBP1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 NDUFA4L2Q9NRX3 87 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 ZNF236Q9UL36 1845 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 UBR1Q8IWV7 1749 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 LRRIQ1Q96JM4 1722 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 KDM6BO15054 1643 aa1.51□□□□□ -2.17
TRAPPC13-206ENST00000504751 ERVK-7P63135 1459 aa1.5□□□□□ -2.17
TRAPPC13-206ENST00000504751 SYS1-DBNDD2H3BUS1 97 aa1.5□□□□□ -2.17
TRAPPC13-206ENST00000504751 MGST2Q99735 147 aa1.5□□□□□ -2.17
TRAPPC13-206ENST00000504751 CDC42SE2Q9NRR3 84 aa1.5□□□□□ -2.17
TRAPPC13-206ENST00000504751 ABCA1O95477 2261 aa1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 IGKV2-40A0A087WW87 121 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 IGLV3-32A0A0A0MS00 114 aa1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 HMGN4O00479 90 aa1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 PPP1R17O96001 155 aa1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 IGKV2D-40P01614 121 aaPredicted RBP1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 EDDM3BP56851 147 aa1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 PRO1854Q9UHT4 67 aa1.49□□□□□ -2.17
TRAPPC13-206ENST00000504751 DNMBPQ6XZF7 1577 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms