RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 ERG28Q9UKR5 140 aa13.64□□□□□ -0.23
SCARB2-203ENST00000502908 IGHV3-38A0A0C4DH36 116 aa13.63□□□□□ -0.23
SCARB2-203ENST00000502908 A0A1B0GV72 72 aa13.63□□□□□ -0.23
SCARB2-203ENST00000502908 SLURP1P55000 103 aa13.63□□□□□ -0.23
SCARB2-203ENST00000502908 TCTEX1D4Q5JR98 221 aa13.63□□□□□ -0.23
SCARB2-203ENST00000502908 Q6ZSV7 163 aa13.63□□□□□ -0.23
SCARB2-203ENST00000502908 SLC25A20O43772 301 aa13.63□□□□□ -0.23
SCARB2-203ENST00000502908 FAM208BQ5VWN6 2430 aa13.62□□□□□ -0.23
SCARB2-203ENST00000502908 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
SCARB2-203ENST00000502908 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-203ENST00000502908 IGKV2-29A2NJV5 120 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-203ENST00000502908 TRGV11A0A075B6L2 103 aa13.61□□□□□ -0.23
SCARB2-203ENST00000502908 CACNA1AO00555 2505 aa13.61□□□□□ -0.23
SCARB2-203ENST00000502908 TEX15Q9BXT5 2789 aa13.61□□□□□ -0.23
SCARB2-203ENST00000502908 ACACBO00763 2458 aa13.61□□□□□ -0.23
SCARB2-203ENST00000502908 RBMY1BA6NDE4 496 aaKnown RBP13.61□□□□□ -0.23
SCARB2-203ENST00000502908 RBMY1EA6NEQ0 496 aaKnown RBP13.61□□□□□ -0.23
SCARB2-203ENST00000502908 RBMY1DP0C7P1 496 aaKnown RBP13.61□□□□□ -0.23
SCARB2-203ENST00000502908 CRYBA4P53673 196 aa13.61□□□□□ -0.23
SCARB2-203ENST00000502908 ADAMTSL4-AS1Q5T5F5 129 aa13.61□□□□□ -0.23
SCARB2-203ENST00000502908 SBSPONQ8IVN8 264 aa13.6□□□□□ -0.23
SCARB2-203ENST00000502908 M0R2P5 195 aa13.6□□□□□ -0.23
SCARB2-203ENST00000502908 TNFRSF18Q9Y5U5 241 aa13.6□□□□□ -0.23
SCARB2-203ENST00000502908 ZNF469Q96JG9 3925 aaPredicted RBP13.59□□□□□ -0.23
SCARB2-203ENST00000502908 NOTCH3Q9UM47 2321 aa13.59□□□□□ -0.23
SCARB2-203ENST00000502908 ZFYVE26Q68DK2 2539 aa13.58□□□□□ -0.24
SCARB2-203ENST00000502908 TLN2Q9Y4G6 2542 aa13.58□□□□□ -0.24
SCARB2-203ENST00000502908 LITAFQ99732 161 aa13.58□□□□□ -0.24
SCARB2-203ENST00000502908 CHD6Q8TD26 2715 aa13.57□□□□□ -0.24
SCARB2-203ENST00000502908 WNK1Q9H4A3 2382 aa13.57□□□□□ -0.24
SCARB2-203ENST00000502908 A0A0B4J2C4 111 aa13.57□□□□□ -0.24
SCARB2-203ENST00000502908 DAND5Q8N907 189 aa13.57□□□□□ -0.24
SCARB2-203ENST00000502908 TRIAP1O43715 76 aa13.57□□□□□ -0.24
SCARB2-203ENST00000502908 ABCA12Q86UK0 2595 aa13.57□□□□□ -0.24
SCARB2-203ENST00000502908 GEMIN7Q9H840 131 aaKnown RBP13.56□□□□□ -0.24
SCARB2-203ENST00000502908 NDUFA12Q9UI09 145 aa13.56□□□□□ -0.24
SCARB2-203ENST00000502908 MRPS36P82909 103 aaKnown RBP13.56□□□□□ -0.24
SCARB2-203ENST00000502908 LINC01356Q8N9X3 169 aa13.56□□□□□ -0.24
SCARB2-203ENST00000502908 NTN5Q8WTR8 489 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-203ENST00000502908 ZNF702PQ9H963 129 aa13.56□□□□□ -0.24
SCARB2-203ENST00000502908 LINC00467Q9BRT7 94 aa13.55□□□□□ -0.24
SCARB2-203ENST00000502908 KHDC1LQ5JSQ8 128 aa13.55□□□□□ -0.24
SCARB2-203ENST00000502908 Q5PR19 223 aa13.55□□□□□ -0.24
SCARB2-203ENST00000502908 CHCHD7Q9BUK0 85 aa13.55□□□□□ -0.24
SCARB2-203ENST00000502908 VPREB3Q9UKI3 123 aa13.55□□□□□ -0.24
SCARB2-203ENST00000502908 H3BMM0 161 aa13.54□□□□□ -0.24
SCARB2-203ENST00000502908 TMEM61Q8N0U2 210 aa13.54□□□□□ -0.24
SCARB2-203ENST00000502908 IGHV1-58A0A0C4DH39 117 aa13.54□□□□□ -0.24
SCARB2-203ENST00000502908 LRRK2Q5S007 2527 aa13.54□□□□□ -0.24
SCARB2-203ENST00000502908 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
SCARB2-203ENST00000502908 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-203ENST00000502908 TEX49A0A1B0GTD5 131 aa13.53□□□□□ -0.24
SCARB2-203ENST00000502908 UBE2E2Q96LR5 201 aa13.53□□□□□ -0.24
SCARB2-203ENST00000502908 UBE2D4Q9Y2X8 147 aa13.53□□□□□ -0.24
SCARB2-203ENST00000502908 PYGO1Q9Y3Y4 419 aa13.53□□□□□ -0.24
SCARB2-203ENST00000502908 NIPBLQ6KC79 2804 aaeCLIP13.53□□□□□ -0.24
SCARB2-203ENST00000502908 TRAV26-1A0A087WT03 109 aa13.53□□□□□ -0.24
SCARB2-203ENST00000502908 LINC01620Q4KN68 170 aa13.53□□□□□ -0.24
SCARB2-203ENST00000502908 EPG5Q9HCE0 2579 aa13.52□□□□□ -0.25
SCARB2-203ENST00000502908 GATA3P23771 443 aa13.52□□□□□ -0.25
SCARB2-203ENST00000502908 LINC01587Q99440 93 aa13.52□□□□□ -0.25
SCARB2-203ENST00000502908 C2CD3Q4AC94 2353 aa13.51□□□□□ -0.25
SCARB2-203ENST00000502908 NF1P21359 2839 aa13.51□□□□□ -0.25
SCARB2-203ENST00000502908 ATXN8Q156A1 80 aa13.51□□□□□ -0.25
SCARB2-203ENST00000502908 VSIG2Q96IQ7 327 aa13.51□□□□□ -0.25
SCARB2-203ENST00000502908 CLUHP3Q96NS8 147 aa13.51□□□□□ -0.25
SCARB2-203ENST00000502908 A0A0U1RRA0 63 aa13.51□□□□□ -0.25
SCARB2-203ENST00000502908 CLEC2BQ92478 149 aa13.51□□□□□ -0.25
SCARB2-203ENST00000502908 IGHV3OR16-12A0A075B7B8 117 aa13.5□□□□□ -0.25
SCARB2-203ENST00000502908 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
SCARB2-203ENST00000502908 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-203ENST00000502908 CDKN2A-AS1Q9UH64 79 aa13.5□□□□□ -0.25
SCARB2-203ENST00000502908 SONP18583 2426 aaKnown RBP13.5□□□□□ -0.25
SCARB2-203ENST00000502908 SETD2Q9BYW2 2564 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-203ENST00000502908 A0A096LNT2 108 aa13.49□□□□□ -0.25
SCARB2-203ENST00000502908 ZNF625Q96I27 306 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-203ENST00000502908 ICOSQ9Y6W8 199 aa13.49□□□□□ -0.25
SCARB2-203ENST00000502908 ZNF415Q09FC8 603 aa13.48□□□□□ -0.25
SCARB2-203ENST00000502908 NDUFA7O95182 113 aa13.48□□□□□ -0.25
SCARB2-203ENST00000502908 NBPF19A0A087WUL8 3843 aa13.48□□□□□ -0.25
SCARB2-203ENST00000502908 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 Q6YL49 198 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 MAP6D1Q9H9H5 199 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 XCL2Q9UBD3 114 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 CRLF1O75462 422 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 COX6A2Q02221 97 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 MIAQ16674 131 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 RNF152Q8N8N0 203 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 RNF183Q96D59 192 aa13.47□□□□□ -0.25
SCARB2-203ENST00000502908 TRBV30A0A0K0K1B3 111 aa13.46□□□□□ -0.25
SCARB2-203ENST00000502908 C11orf72Q8NBR9 251 aa13.46□□□□□ -0.25
SCARB2-203ENST00000502908 NAV2Q8IVL1 2488 aa13.46□□□□□ -0.25
SCARB2-203ENST00000502908 EDA2RQ9HAV5 297 aa13.46□□□□□ -0.26
SCARB2-203ENST00000502908 ZNF462Q96JM2 2506 aa13.45□□□□□ -0.26
SCARB2-203ENST00000502908 C11orf44Q8N8P7 122 aa13.45□□□□□ -0.26
SCARB2-203ENST00000502908 SPANXDQ9BXN6 97 aa13.45□□□□□ -0.26
SCARB2-203ENST00000502908 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
SCARB2-203ENST00000502908 SPANXCQ9NY87 97 aa13.45□□□□□ -0.26
SCARB2-203ENST00000502908 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
SCARB2-203ENST00000502908 DYNLRB2Q8TF09 96 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms