RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CNBPP62633 177 aaKnown RBP8.04□□□□□ -1.12
SKA1-205ENST00000494518 CCL20P78556 96 aa8.04□□□□□ -1.12
SKA1-205ENST00000494518 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
SKA1-205ENST00000494518 GNG13Q9P2W3 67 aa8.04□□□□□ -1.12
SKA1-205ENST00000494518 A0A087WYN8 130 aa8.03□□□□□ -1.12
SKA1-205ENST00000494518 RAB19A4D1S5 217 aa8.03□□□□□ -1.12
SKA1-205ENST00000494518 H7C1H1 209 aa8.03□□□□□ -1.12
SKA1-205ENST00000494518 ZNF345Q14585 488 aa8.03□□□□□ -1.12
SKA1-205ENST00000494518 RASL11AQ6T310 242 aa8.03□□□□□ -1.12
SKA1-205ENST00000494518 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 UBE2L6O14933 153 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 BCL2L11O43521 198 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 P01737 135 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 SULT1A2P50226 295 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 CIRBPQ14011 172 aaKnown RBP8.02□□□□□ -1.13
SKA1-205ENST00000494518 RGS21Q2M5E4 152 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 C11orf52Q96A22 123 aa8.02□□□□□ -1.13
SKA1-205ENST00000494518 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
SKA1-205ENST00000494518 C19orf71A6NCJ1 209 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 GAGE12HA6NDE8 117 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 PHOX2AO14813 284 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 AMTP48728 403 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 RPS20P60866 119 aaKnown RBP8.01□□□□□ -1.13
SKA1-205ENST00000494518 CACNG7P62955 275 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 HIGD2BQ4VC39 106 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 WDR73Q6P4I2 378 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 Q6ZRU5 148 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 C15orf56Q8N910 161 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 SPACA4Q8TDM5 124 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 MANBALQ9NQG1 85 aa8.01□□□□□ -1.13
SKA1-205ENST00000494518 A0A1B0GUV1 79 aa8□□□□□ -1.13
SKA1-205ENST00000494518 GNG4P50150 75 aa8□□□□□ -1.13
SKA1-205ENST00000494518 ODF1Q14990 250 aa8□□□□□ -1.13
SKA1-205ENST00000494518 NIT2Q9NQR4 276 aa8□□□□□ -1.13
SKA1-205ENST00000494518 TRAV26-2A0A0B4J265 109 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 IGKV2-24A0A0C4DH68 120 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 IFNA1P01562 189 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 TRGC1P0CF51 173 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 NTF3P20783 257 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 COX6A2Q02221 97 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 COTL1Q14019 142 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 DPH3P1Q9H4G8 78 aa7.99□□□□□ -1.13
SKA1-205ENST00000494518 HMSDA8MTL9 139 aa7.98□□□□□ -1.13
SKA1-205ENST00000494518 MAJINQ3KP22 176 aa7.98□□□□□ -1.13
SKA1-205ENST00000494518 PRSS3P2Q8NHM4 247 aa7.98□□□□□ -1.13
SKA1-205ENST00000494518 RNF185Q96GF1 192 aa7.98□□□□□ -1.13
SKA1-205ENST00000494518 PGLYRP4Q96LB8 373 aa7.98□□□□□ -1.13
SKA1-205ENST00000494518 RNF213Q63HN8 5207 aa7.98□□□□□ -1.13
SKA1-205ENST00000494518 TRBV20OR9-2A0A075B6H5 130 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.97□□□□□ -1.13
SKA1-205ENST00000494518 IGKV2-29A2NJV5 120 aaPredicted RBP7.97□□□□□ -1.13
SKA1-205ENST00000494518 XKRY2A2RUG3 117 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 F2Z2F3 143 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 TWIST1Q15672 202 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 Q6ZNX1 250 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 LYPD6BQ8NI32 183 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 GTSF1Q8WW33 167 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 RPL39LQ96EH5 51 aaKnown RBP7.97□□□□□ -1.13
SKA1-205ENST00000494518 MED9Q9NWA0 146 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 PLAC8Q9NZF1 115 aa7.97□□□□□ -1.13
SKA1-205ENST00000494518 EIF5AP63241 154 aaKnown RBP7.96□□□□□ -1.14
SKA1-205ENST00000494518 RNASEKQ6P5S7 137 aaKnown RBP7.96□□□□□ -1.14
SKA1-205ENST00000494518 GATD1Q8NB37 220 aa7.96□□□□□ -1.14
SKA1-205ENST00000494518 C7orf33Q8WU49 177 aa7.96□□□□□ -1.14
SKA1-205ENST00000494518 CHCHD10Q8WYQ3 142 aaPredicted RBP7.96□□□□□ -1.14
SKA1-205ENST00000494518 CTRLP40313 264 aa7.95□□□□□ -1.14
SKA1-205ENST00000494518 RPS10P46783 165 aaKnown RBP7.95□□□□□ -1.14
SKA1-205ENST00000494518 MEF2BQ02080 365 aaPredicted RBP7.95□□□□□ -1.14
SKA1-205ENST00000494518 AMMECR1LQ6DCA0 310 aa7.95□□□□□ -1.14
SKA1-205ENST00000494518 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
SKA1-205ENST00000494518 NUDT10Q8NFP7 164 aa7.95□□□□□ -1.14
SKA1-205ENST00000494518 NUDT11Q96G61 164 aa7.95□□□□□ -1.14
SKA1-205ENST00000494518 TRAV1-1A0A0B4J248 108 aa7.94□□□□□ -1.14
SKA1-205ENST00000494518 NDUFS6O75380 124 aaKnown RBP7.94□□□□□ -1.14
SKA1-205ENST00000494518 FOXA3P55318 350 aaPredicted RBP7.94□□□□□ -1.14
SKA1-205ENST00000494518 STPG4Q8N801 248 aa7.94□□□□□ -1.14
SKA1-205ENST00000494518 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
SKA1-205ENST00000494518 RNASE7Q9H1E1 156 aaKnown RBP7.94□□□□□ -1.14
SKA1-205ENST00000494518 A0A096LNI7 61 aa7.93□□□□□ -1.14
SKA1-205ENST00000494518 PDE6DO43924 150 aa7.93□□□□□ -1.14
SKA1-205ENST00000494518 APCSP02743 223 aa7.93□□□□□ -1.14
SKA1-205ENST00000494518 PRR3P79522 188 aaKnown RBP7.93□□□□□ -1.14
SKA1-205ENST00000494518 C9orf62Q8N4C0 152 aa7.93□□□□□ -1.14
SKA1-205ENST00000494518 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
SKA1-205ENST00000494518 TEX46H3BTG2 121 aa7.92□□□□□ -1.14
SKA1-205ENST00000494518 K7EN84 100 aa7.92□□□□□ -1.14
SKA1-205ENST00000494518 BCL2P10415 239 aa7.92□□□□□ -1.14
SKA1-205ENST00000494518 FGF6P10767 208 aa7.92□□□□□ -1.14
SKA1-205ENST00000494518 XCL1P47992 114 aa7.92□□□□□ -1.14
SKA1-205ENST00000494518 RPP21Q9H633 154 aaKnown RBP7.92□□□□□ -1.14
SKA1-205ENST00000494518 BIN3Q9NQY0 253 aa7.92□□□□□ -1.14
SKA1-205ENST00000494518 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
SKA1-205ENST00000494518 FOXI1Q12951 378 aa7.91□□□□□ -1.14
SKA1-205ENST00000494518 CNFNQ9BYD5 112 aa7.91□□□□□ -1.14
SKA1-205ENST00000494518 KRTAP4-7Q9BYR0 210 aa7.91□□□□□ -1.14
SKA1-205ENST00000494518 SDHAF1A6NFY7 115 aa7.9□□□□□ -1.14
SKA1-205ENST00000494518 OCC1Q8TAD7 63 aa7.9□□□□□ -1.14
SKA1-205ENST00000494518 LINC01600Q96MT4 127 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms