RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 LINC00269Q8N2A0 174 aa2.01□□□□□ -2.09
PTPRC-212ENST00000491302 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
PTPRC-212ENST00000491302 PRORSD1PA6NEY8 169 aa2□□□□□ -2.09
PTPRC-212ENST00000491302 MAXP61244 160 aa2□□□□□ -2.09
PTPRC-212ENST00000491302 SPATA45Q537H7 98 aa2□□□□□ -2.09
PTPRC-212ENST00000491302 LINC00299Q6ZSB3 139 aa2□□□□□ -2.09
PTPRC-212ENST00000491302 TRAPPC2LQ9UL33 140 aa2□□□□□ -2.09
PTPRC-212ENST00000491302 NDUFAF1Q9Y375 327 aa2□□□□□ -2.09
PTPRC-212ENST00000491302 PDCD11Q14690 1871 aaKnown RBP2□□□□□ -2.09
PTPRC-212ENST00000491302 ZGRF1Q86YA3 2104 aa1.99□□□□□ -2.09
PTPRC-212ENST00000491302 KIF20BQ96Q89 1820 aa1.99□□□□□ -2.09
PTPRC-212ENST00000491302 TRAV13-1A0A0B4J241 112 aa1.99□□□□□ -2.09
PTPRC-212ENST00000491302 TMEM35BQ8NCS4 154 aa1.99□□□□□ -2.09
PTPRC-212ENST00000491302 CCDC115Q96NT0 180 aa1.99□□□□□ -2.09
PTPRC-212ENST00000491302 MRPL40Q9NQ50 206 aaKnown RBP1.99□□□□□ -2.09
PTPRC-212ENST00000491302 TRRAPQ9Y4A5 3859 aa1.99□□□□□ -2.09
PTPRC-212ENST00000491302 TACC2O95359 2948 aa1.98□□□□□ -2.09
PTPRC-212ENST00000491302 SONP18583 2426 aaKnown RBP1.98□□□□□ -2.09
PTPRC-212ENST00000491302 SAA1P0DJI8 122 aaPredicted RBP1.98□□□□□ -2.09
PTPRC-212ENST00000491302 RPL7P18124 248 aaKnown RBP1.98□□□□□ -2.09
PTPRC-212ENST00000491302 EFNA4P52798 201 aa1.98□□□□□ -2.09
PTPRC-212ENST00000491302 DR1Q01658 176 aa1.98□□□□□ -2.09
PTPRC-212ENST00000491302 CASC2Q6XLA1 102 aa1.98□□□□□ -2.09
PTPRC-212ENST00000491302 HSPB11Q9Y547 144 aa1.98□□□□□ -2.09
PTPRC-212ENST00000491302 TENM3Q9P273 2699 aa1.98□□□□□ -2.09
PTPRC-212ENST00000491302 SACSQ9NZJ4 4579 aa1.97□□□□□ -2.09
PTPRC-212ENST00000491302 KNTC1P50748 2209 aa1.97□□□□□ -2.09
PTPRC-212ENST00000491302 TENM2Q9NT68 2774 aa1.97□□□□□ -2.09
PTPRC-212ENST00000491302 H3BMG7 143 aa1.97□□□□□ -2.09
PTPRC-212ENST00000491302 TEX29Q8N6K0 151 aa1.97□□□□□ -2.09
PTPRC-212ENST00000491302 Q9Y3F1 56 aa1.97□□□□□ -2.09
PTPRC-212ENST00000491302 MED12Q93074 2177 aa1.97□□□□□ -2.09
PTPRC-212ENST00000491302 LINC00575Q6W349 94 aa1.96□□□□□ -2.1
PTPRC-212ENST00000491302 MORN4Q8NDC4 146 aa1.96□□□□□ -2.1
PTPRC-212ENST00000491302 CLEC2BQ92478 149 aa1.96□□□□□ -2.1
PTPRC-212ENST00000491302 CNTRLQ7Z7A1 2325 aa1.96□□□□□ -2.1
PTPRC-212ENST00000491302 PKDREJQ9NTG1 2253 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 TRAV23DV6A0A075B6W5 121 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 IGLV3-1P01715 115 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 ZCCHC23Q6ZST2 131 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 TAC4Q86UU9 113 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 TSTD1Q8NFU3 115 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 NIT2Q9NQR4 276 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 DYNC2H1Q8NCM8 4307 aaKnown RBP1.95□□□□□ -2.1
PTPRC-212ENST00000491302 DNAH1Q9P2D7 4330 aa1.95□□□□□ -2.1
PTPRC-212ENST00000491302 ABCA4P78363 2273 aa1.94□□□□□ -2.1
PTPRC-212ENST00000491302 LOC107984640A0A0U1RRK4 108 aa1.94□□□□□ -2.1
PTPRC-212ENST00000491302 OR10AC1Q8NH08 325 aa1.94□□□□□ -2.1
PTPRC-212ENST00000491302 GINS2Q9Y248 185 aa1.94□□□□□ -2.1
PTPRC-212ENST00000491302 C3orf85A0A1B0GTC6 90 aa1.93□□□□□ -2.1
PTPRC-212ENST00000491302 LOC107986453A0A1B0GWG9 222 aa1.93□□□□□ -2.1
PTPRC-212ENST00000491302 ARL5CA6NH57 179 aa1.93□□□□□ -2.1
PTPRC-212ENST00000491302 PIN1P1O15428 100 aa1.93□□□□□ -2.1
PTPRC-212ENST00000491302 RPS3P23396 243 aaKnown RBP eCLIP1.93□□□□□ -2.1
PTPRC-212ENST00000491302 LSM3P62310 102 aaKnown RBP1.93□□□□□ -2.1
PTPRC-212ENST00000491302 GLIPR1L1Q6UWM5 242 aa1.93□□□□□ -2.1
PTPRC-212ENST00000491302 ANK3Q12955 4377 aaKnown RBP1.93□□□□□ -2.1
PTPRC-212ENST00000491302 F5P12259 2224 aa1.93□□□□□ -2.1
PTPRC-212ENST00000491302 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.92□□□□□ -2.1
PTPRC-212ENST00000491302 A0A1W2PPM0 123 aa1.92□□□□□ -2.1
PTPRC-212ENST00000491302 TNFSF15O95150 251 aa1.92□□□□□ -2.1
PTPRC-212ENST00000491302 NBEAP1P0C6P0 100 aa1.92□□□□□ -2.1
PTPRC-212ENST00000491302 CRYGSP22914 178 aa1.92□□□□□ -2.1
PTPRC-212ENST00000491302 Q8N6K4 173 aa1.92□□□□□ -2.1
PTPRC-212ENST00000491302 CBLN4Q9NTU7 201 aa1.92□□□□□ -2.1
PTPRC-212ENST00000491302 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-212ENST00000491302 A0A0J9YY99 117 aa1.91□□□□□ -2.1
PTPRC-212ENST00000491302 LCE6AA0A183 80 aa1.91□□□□□ -2.1
PTPRC-212ENST00000491302 CIB3Q96Q77 187 aaPredicted RBP1.91□□□□□ -2.1
PTPRC-212ENST00000491302 SPANXA1Q9NS26 97 aa1.91□□□□□ -2.1
PTPRC-212ENST00000491302 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
PTPRC-212ENST00000491302 AKAP6Q13023 2319 aa1.91□□□□□ -2.1
PTPRC-212ENST00000491302 PTPRDP23468 1912 aa1.91□□□□□ -2.1
PTPRC-212ENST00000491302 FOCADQ5VW36 1801 aa1.91□□□□□ -2.1
PTPRC-212ENST00000491302 TANC2Q9HCD6 1990 aa1.9□□□□□ -2.1
PTPRC-212ENST00000491302 CD52P31358 61 aa1.9□□□□□ -2.11
PTPRC-212ENST00000491302 RPS28P62857 69 aaKnown RBP1.9□□□□□ -2.11
PTPRC-212ENST00000491302 NEDD8Q15843 81 aa1.9□□□□□ -2.11
PTPRC-212ENST00000491302 TMEM229BQ8NBD8 167 aa1.9□□□□□ -2.11
PTPRC-212ENST00000491302 AP1S3Q96PC3 154 aa1.9□□□□□ -2.11
PTPRC-212ENST00000491302 BOKQ9UMX3 212 aaPredicted RBP1.9□□□□□ -2.11
PTPRC-212ENST00000491302 J3KT08 172 aa1.89□□□□□ -2.11
PTPRC-212ENST00000491302 FOXA3P55318 350 aaPredicted RBP1.89□□□□□ -2.11
PTPRC-212ENST00000491302 SBSPONQ8IVN8 264 aa1.89□□□□□ -2.11
PTPRC-212ENST00000491302 OR5A2Q8NGI9 324 aa1.89□□□□□ -2.11
PTPRC-212ENST00000491302 NAT14Q8WUY8 206 aa1.89□□□□□ -2.11
PTPRC-212ENST00000491302 RPL22P35268 128 aaKnown RBP1.88□□□□□ -2.11
PTPRC-212ENST00000491302 DEFB109BQ30KR1 87 aa1.88□□□□□ -2.11
PTPRC-212ENST00000491302 OR51A4Q8NGJ6 313 aa1.88□□□□□ -2.11
PTPRC-212ENST00000491302 NABP2Q9BQ15 211 aa1.88□□□□□ -2.11
PTPRC-212ENST00000491302 FKBP11Q9NYL4 201 aa1.88□□□□□ -2.11
PTPRC-212ENST00000491302 COL7A1Q02388 2944 aa1.88□□□□□ -2.11
PTPRC-212ENST00000491302 KIAA1549LQ6ZVL6 1849 aa1.87□□□□□ -2.11
PTPRC-212ENST00000491302 CCSMST1Q4G0I0 132 aa1.87□□□□□ -2.11
PTPRC-212ENST00000491302 OCIAD2Q56VL3 154 aa1.87□□□□□ -2.11
PTPRC-212ENST00000491302 IZUMO2Q6UXV1 221 aa1.87□□□□□ -2.11
PTPRC-212ENST00000491302 BRK1Q8WUW1 75 aa1.87□□□□□ -2.11
PTPRC-212ENST00000491302 MUC4Q99102 2169 aa1.87□□□□□ -2.11
PTPRC-212ENST00000491302 SPANXCQ9NY87 97 aa1.87□□□□□ -2.11
PTPRC-212ENST00000491302 MPC1Q9Y5U8 109 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms