RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 RPL37AP61513 92 aaKnown RBP9.86□□□□□ -0.83
TRIM50-203ENST00000488217 UQCC3Q6UW78 93 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 CLPSL2Q6UWE3 100 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 OR2D3Q8NGH3 330 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 TPPP3Q9BW30 176 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 PKHD1L1Q86WI1 4243 aa9.86□□□□□ -0.83
TRIM50-203ENST00000488217 CACNG7P62955 275 aa9.85□□□□□ -0.83
TRIM50-203ENST00000488217 REG3AQ06141 175 aa9.85□□□□□ -0.83
TRIM50-203ENST00000488217 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
TRIM50-203ENST00000488217 SMIM12Q96EX1 92 aa9.85□□□□□ -0.83
TRIM50-203ENST00000488217 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 F2Z2F3 143 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 P01737 135 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 MGPP08493 103 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 SUMO4Q6EEV6 95 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 OCC1Q8TAD7 63 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 SMIM7Q9BQ49 75 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
TRIM50-203ENST00000488217 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
TRIM50-203ENST00000488217 IGLV10-54A0A075B6I4 117 aa9.83□□□□□ -0.84
TRIM50-203ENST00000488217 C19orf71A6NCJ1 209 aa9.83□□□□□ -0.84
TRIM50-203ENST00000488217 ZNF727A8MUV8 499 aa9.83□□□□□ -0.84
TRIM50-203ENST00000488217 FAM74A3Q4VXF1 159 aa9.83□□□□□ -0.84
TRIM50-203ENST00000488217 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
TRIM50-203ENST00000488217 XKRY2A2RUG3 117 aa9.82□□□□□ -0.84
TRIM50-203ENST00000488217 RASL11AQ6T310 242 aa9.82□□□□□ -0.84
TRIM50-203ENST00000488217 C20orf203Q8NBC4 194 aa9.82□□□□□ -0.84
TRIM50-203ENST00000488217 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
TRIM50-203ENST00000488217 NIT2Q9NQR4 276 aa9.82□□□□□ -0.84
TRIM50-203ENST00000488217 IGLV4-60A0A075B6I1 120 aa9.81□□□□□ -0.84
TRIM50-203ENST00000488217 PANO1I0J062 215 aa9.81□□□□□ -0.84
TRIM50-203ENST00000488217 K7EN84 100 aa9.81□□□□□ -0.84
TRIM50-203ENST00000488217 NTF3P20783 257 aa9.81□□□□□ -0.84
TRIM50-203ENST00000488217 CNBPP62633 177 aaKnown RBP9.81□□□□□ -0.84
TRIM50-203ENST00000488217 LYZL1Q6UWQ5 148 aa9.81□□□□□ -0.84
TRIM50-203ENST00000488217 hDV102S1A0JD36 115 aa9.8□□□□□ -0.84
TRIM50-203ENST00000488217 TRGC1P0CF51 173 aa9.8□□□□□ -0.84
TRIM50-203ENST00000488217 HNRNPA3P51991 378 aaKnown RBP9.8□□□□□ -0.84
TRIM50-203ENST00000488217 TMEM241Q24JQ0 296 aa9.8□□□□□ -0.84
TRIM50-203ENST00000488217 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
TRIM50-203ENST00000488217 BIN3Q9NQY0 253 aa9.8□□□□□ -0.84
TRIM50-203ENST00000488217 SLPIP03973 132 aa9.79□□□□□ -0.84
TRIM50-203ENST00000488217 LINC01551Q86U37 167 aa9.79□□□□□ -0.84
TRIM50-203ENST00000488217 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
TRIM50-203ENST00000488217 GFRA4Q9GZZ7 299 aa9.79□□□□□ -0.84
TRIM50-203ENST00000488217 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
TRIM50-203ENST00000488217 AP5S1Q9NUS5 200 aa9.79□□□□□ -0.84
TRIM50-203ENST00000488217 NAT8Q9UHE5 227 aa9.79□□□□□ -0.84
TRIM50-203ENST00000488217 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.78□□□□□ -0.84
TRIM50-203ENST00000488217 UBE2L6O14933 153 aa9.78□□□□□ -0.84
TRIM50-203ENST00000488217 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
TRIM50-203ENST00000488217 NUDT11Q96G61 164 aa9.78□□□□□ -0.84
TRIM50-203ENST00000488217 IGHV3-64A0A075B6Q5 118 aa9.77□□□□□ -0.85
TRIM50-203ENST00000488217 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
TRIM50-203ENST00000488217 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
TRIM50-203ENST00000488217 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
TRIM50-203ENST00000488217 TWIST1Q15672 202 aa9.77□□□□□ -0.85
TRIM50-203ENST00000488217 RNASE7Q9H1E1 156 aaKnown RBP9.77□□□□□ -0.85
TRIM50-203ENST00000488217 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.85
TRIM50-203ENST00000488217 COTL1Q14019 142 aa9.76□□□□□ -0.85
TRIM50-203ENST00000488217 APOC3P02656 99 aa9.75□□□□□ -0.85
TRIM50-203ENST00000488217 AMTP48728 403 aa9.75□□□□□ -0.85
TRIM50-203ENST00000488217 ADIRFQ15847 76 aa9.75□□□□□ -0.85
TRIM50-203ENST00000488217 CFAP161Q6P656 301 aa9.75□□□□□ -0.85
TRIM50-203ENST00000488217 Q6ZRU5 148 aa9.75□□□□□ -0.85
TRIM50-203ENST00000488217 FAM231DQ6ZW35 169 aa9.75□□□□□ -0.85
TRIM50-203ENST00000488217 RNF185Q96GF1 192 aa9.75□□□□□ -0.85
TRIM50-203ENST00000488217 A0A087WYN8 130 aa9.74□□□□□ -0.85
TRIM50-203ENST00000488217 F8W036 122 aa9.74□□□□□ -0.85
TRIM50-203ENST00000488217 ADCYAP1P18509 176 aa9.74□□□□□ -0.85
TRIM50-203ENST00000488217 SVBPQ8N300 66 aa9.74□□□□□ -0.85
TRIM50-203ENST00000488217 GATD1Q8NB37 220 aa9.74□□□□□ -0.85
TRIM50-203ENST00000488217 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
TRIM50-203ENST00000488217 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
TRIM50-203ENST00000488217 GATCO43716 136 aaKnown RBP9.73□□□□□ -0.85
TRIM50-203ENST00000488217 CTRLP40313 264 aa9.73□□□□□ -0.85
TRIM50-203ENST00000488217 CNFNQ9BYD5 112 aa9.73□□□□□ -0.85
TRIM50-203ENST00000488217 RPP21Q9H633 154 aaKnown RBP9.73□□□□□ -0.85
TRIM50-203ENST00000488217 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
TRIM50-203ENST00000488217 SCO1O75880 301 aa9.72□□□□□ -0.85
TRIM50-203ENST00000488217 CHTF8P0CG12 524 aa9.72□□□□□ -0.85
TRIM50-203ENST00000488217 SEC11CQ9BY50 192 aa9.72□□□□□ -0.85
TRIM50-203ENST00000488217 CARHSP1Q9Y2V2 147 aaKnown RBP9.72□□□□□ -0.85
TRIM50-203ENST00000488217 TRAV26-2A0A0B4J265 109 aa9.71□□□□□ -0.86
TRIM50-203ENST00000488217 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
TRIM50-203ENST00000488217 SNAPINO95295 136 aa9.71□□□□□ -0.86
TRIM50-203ENST00000488217 MT1HL1P0DM35 61 aa9.71□□□□□ -0.86
TRIM50-203ENST00000488217 RPS10P46783 165 aaKnown RBP9.71□□□□□ -0.86
TRIM50-203ENST00000488217 PNRC1Q12796 327 aaPredicted RBP9.71□□□□□ -0.86
TRIM50-203ENST00000488217 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
TRIM50-203ENST00000488217 PLAC8Q9NZF1 115 aa9.71□□□□□ -0.86
TRIM50-203ENST00000488217 COX6A2Q02221 97 aa9.7□□□□□ -0.86
TRIM50-203ENST00000488217 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
TRIM50-203ENST00000488217 AMMECR1LQ6DCA0 310 aa9.7□□□□□ -0.86
TRIM50-203ENST00000488217 SMIM15Q7Z3B0 74 aa9.7□□□□□ -0.86
TRIM50-203ENST00000488217 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
TRIM50-203ENST00000488217 GTSF1Q8WW33 167 aa9.7□□□□□ -0.86
TRIM50-203ENST00000488217 TMA7Q9Y2S6 64 aaKnown RBP9.7□□□□□ -0.86
TRIM50-203ENST00000488217 A8MWL6 223 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms