RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 FAM213BQ8TBF2 198 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 FAM167A-AS1Q96KT0 104 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 PMCHL2Q9BQD1 86 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 NDUFA4L2Q9NRX3 87 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 ARAP2Q8WZ64 1704 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 GOLGA3Q08378 1498 aa0.92□□□□□ -2.26
HMGB1P36-201ENST00000487709 ALPK3Q96L96 1907 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 ATOX1O00244 68 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 ACYP2P14621 99 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 TMEM170BQ5T4T1 132 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 BAGE3Q86Y29 109 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 WFDC6Q9BQY6 131 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 PRO1854Q9UHT4 67 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 V9GYH0 126 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 PTPRDP23468 1912 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 ROBO1Q9Y6N7 1651 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 MUC22E2RYF6 1773 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 DLEC1Q9Y238 1755 aa0.91□□□□□ -2.26
HMGB1P36-201ENST00000487709 PLXNA2O75051 1894 aa0.9□□□□□ -2.26
HMGB1P36-201ENST00000487709 TRPM7Q96QT4 1865 aa0.9□□□□□ -2.26
HMGB1P36-201ENST00000487709 TNRC6AQ8NDV7 1962 aaKnown RBP0.9□□□□□ -2.26
HMGB1P36-201ENST00000487709 TNS1Q9HBL0 1735 aaKnown RBP0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 HMGN4O00479 90 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRAPPC2P0DI81 140 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRAPPC2BP0DI82 140 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 ASIPP42127 132 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 CCL18P55774 89 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 C6orf52Q5T4I8 152 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 PLAC4Q8WY50 150 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 Q96NJ1 140 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 FAIMQ9NVQ4 179 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 MAGI1Q96QZ7 1491 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 EML5Q05BV3 1969 aa0.9□□□□□ -2.27
HMGB1P36-201ENST00000487709 CC2D2AQ9P2K1 1620 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 NWD2Q9ULI1 1742 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 UNC13CQ8NB66 2214 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 MCM3APO60318 1980 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 RB1CC1Q8TDY2 1594 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 BAZ1AQ9NRL2 1556 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 ADGRL2O95490 1459 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 MRC1P22897 1456 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 ANKRD36BQ8N2N9 1353 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRGV1A0A0A0MS02 117 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRAV1-2A0A0B4J238 106 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRAV22A0A0B4J277 110 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 CTXND1A0A1B0GTU2 59 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 F8VRH5 84 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 SFT2D2O95562 160 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 APOC3P02656 99 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 GYPAP02724 150 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 UBE2D3P61077 147 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 UBE2D2P62837 147 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 Q5VV11 94 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 Q8N6K4 173 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 SMIM4Q8WVI0 70 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 AMELXQ99217 191 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 BPESC1Q9GZL8 116 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 CDC42SE2Q9NRR3 84 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 NRXN2Q9P2S2 1712 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 SCRIBQ14160 1630 aa0.89□□□□□ -2.27
HMGB1P36-201ENST00000487709 HEATR1Q9H583 2144 aaKnown RBP0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 RAPGEF2Q9Y4G8 1499 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 A0A096LNT2 108 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 TMEM14DPA8MWL7 114 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 M0R135 149 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 UQCR11O14957 56 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 LY6G6CO95867 125 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 IGLC1P0CG04 106 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 SPINT3P49223 89 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 RPL37P61927 97 aaKnown RBP0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 COX17Q14061 63 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 VMO1Q7Z5L0 202 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 BAGE2Q86Y30 109 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 C9orf62Q8N4C0 152 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 SERP2Q8N6R1 65 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 SMIM11BQ8TCY0 68 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRGV9Q99603 122 aa0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 PRDM15P57071 1507 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P36-201ENST00000487709 ASCC3Q8N3C0 2202 aaKnown RBP0.87□□□□□ -2.27
HMGB1P36-201ENST00000487709 UQCRHLA0A096LP55 91 aa0.87□□□□□ -2.27
HMGB1P36-201ENST00000487709 TRBV7-7A0A0K0K1E9 115 aa0.87□□□□□ -2.27
HMGB1P36-201ENST00000487709 FAUP35544 74 aaKnown RBP0.87□□□□□ -2.27
HMGB1P36-201ENST00000487709 NXT2Q9NPJ8 142 aaKnown RBP0.87□□□□□ -2.27
HMGB1P36-201ENST00000487709 CACFD1Q9UGQ2 172 aa0.87□□□□□ -2.27
HMGB1P36-201ENST00000487709 PLEKHH2Q8IVE3 1493 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 SHROOM2Q13796 1616 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 NOTCH1P46531 2555 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 CDK13Q14004 1512 aaKnown RBP0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 IGLC7A0M8Q6 106 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 K7EIL1 84 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 SAA2P0DJI9 122 aaPredicted RBP0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 GCHFRP30047 84 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 CFAP126Q5VTH2 177 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 SFTA2Q6UW10 78 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 PRR15LQ9BU68 103 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 NPVFQ9HCQ7 196 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 LINC01558Q9Y6Z2 57 aa0.86□□□□□ -2.27
HMGB1P36-201ENST00000487709 ARL2-SNX15V9GYD0 113 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms