RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MGPP08493 103 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 CENPWQ5EE01 88 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 SUMO4Q6EEV6 95 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 C9orf163Q8N9P6 203 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 FER1L6-AS1Q8NA97 138 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 OR2D3Q8NGH3 330 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 MANBALQ9NQG1 85 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
VPS16-208ENST00000487461 IGHV1-24A0A0C4DH33 117 aa7.85□□□□□ -1.15
VPS16-208ENST00000487461 C7orf77A4D0Y5 90 aa7.85□□□□□ -1.15
VPS16-208ENST00000487461 OXTP01178 125 aa7.85□□□□□ -1.15
VPS16-208ENST00000487461 SRP19P09132 144 aaKnown RBP7.85□□□□□ -1.15
VPS16-208ENST00000487461 TAGLN2P37802 199 aaKnown RBP7.85□□□□□ -1.15
VPS16-208ENST00000487461 RPS20P60866 119 aaKnown RBP7.85□□□□□ -1.15
VPS16-208ENST00000487461 CBLN2Q8IUK8 224 aa7.85□□□□□ -1.15
VPS16-208ENST00000487461 DAZAP1Q96EP5 407 aaKnown RBP7.85□□□□□ -1.15
VPS16-208ENST00000487461 PANO1I0J062 215 aa7.84□□□□□ -1.15
VPS16-208ENST00000487461 RPL37AP61513 92 aaKnown RBP7.84□□□□□ -1.15
VPS16-208ENST00000487461 CACNG7P62955 275 aa7.84□□□□□ -1.15
VPS16-208ENST00000487461 REG3AQ06141 175 aa7.84□□□□□ -1.15
VPS16-208ENST00000487461 SDIM1Q6ZPB5 146 aa7.84□□□□□ -1.15
VPS16-208ENST00000487461 C20orf203Q8NBC4 194 aa7.84□□□□□ -1.15
VPS16-208ENST00000487461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.84□□□□□ -1.15
VPS16-208ENST00000487461 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 IGLV10-54A0A075B6I4 117 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 F2Z2F3 143 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 H7C1H1 209 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 GNG4P50150 75 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 HNRNPA3P51991 378 aaKnown RBP7.83□□□□□ -1.16
VPS16-208ENST00000487461 RASL11AQ6T310 242 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 GFRA4Q9GZZ7 299 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 RPS10P5Q9NQ39 176 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 FAT3Q8TDW7 4589 aa7.83□□□□□ -1.16
VPS16-208ENST00000487461 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 IFNA1P01562 189 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 NTF3P20783 257 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 RAB5BP61020 215 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 SERTAD4-AS1Q5TG53 156 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 LYZL1Q6UWQ5 148 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 SMIM12Q96EX1 92 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 TMEM243Q9BU79 118 aa7.82□□□□□ -1.16
VPS16-208ENST00000487461 TRBV20OR9-2A0A075B6H5 130 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 XKRY2A2RUG3 117 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 C1orf196B1AJZ1 125 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 P01737 135 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 SLPIP03973 132 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 MEF2BQ02080 365 aaPredicted RBP7.81□□□□□ -1.16
VPS16-208ENST00000487461 PNRC1Q12796 327 aaPredicted RBP7.81□□□□□ -1.16
VPS16-208ENST00000487461 LINC00518Q8N0U6 118 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 NUDT10Q8NFP7 164 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 NUDT11Q96G61 164 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 NIT2Q9NQR4 276 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 TMEM242Q9NWH2 141 aa7.81□□□□□ -1.16
VPS16-208ENST00000487461 TRAV8-4A0A0B4J246 113 aa7.8□□□□□ -1.16
VPS16-208ENST00000487461 hDV102S1A0JD36 115 aa7.8□□□□□ -1.16
VPS16-208ENST00000487461 PDE6DO43924 150 aa7.8□□□□□ -1.16
VPS16-208ENST00000487461 TRGC1P0CF51 173 aa7.8□□□□□ -1.16
VPS16-208ENST00000487461 WDR73Q6P4I2 378 aa7.8□□□□□ -1.16
VPS16-208ENST00000487461 YPEL4Q96NS1 127 aa7.8□□□□□ -1.16
VPS16-208ENST00000487461 DPH3P1Q9H4G8 78 aa7.8□□□□□ -1.16
VPS16-208ENST00000487461 BCL2P10415 239 aa7.79□□□□□ -1.16
VPS16-208ENST00000487461 RAB5AP20339 215 aa7.79□□□□□ -1.16
VPS16-208ENST00000487461 CNBPP62633 177 aaKnown RBP7.79□□□□□ -1.16
VPS16-208ENST00000487461 PGLYRP4Q96LB8 373 aa7.79□□□□□ -1.16
VPS16-208ENST00000487461 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
VPS16-208ENST00000487461 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
VPS16-208ENST00000487461 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
VPS16-208ENST00000487461 COTL1Q14019 142 aa7.78□□□□□ -1.16
VPS16-208ENST00000487461 TWIST1Q15672 202 aa7.78□□□□□ -1.16
VPS16-208ENST00000487461 GATD1Q8NB37 220 aa7.78□□□□□ -1.16
VPS16-208ENST00000487461 CTDSP1Q9GZU7 261 aa7.78□□□□□ -1.16
VPS16-208ENST00000487461 HMCN2Q8NDA2 5059 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 TMEM250H0YL14 139 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 UBE2L6O14933 153 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 CTRLP40313 264 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 AMTP48728 403 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 CNFNQ9BYD5 112 aa7.77□□□□□ -1.17
VPS16-208ENST00000487461 RNASE7Q9H1E1 156 aaKnown RBP7.77□□□□□ -1.17
VPS16-208ENST00000487461 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
VPS16-208ENST00000487461 TRAV26-2A0A0B4J265 109 aa7.76□□□□□ -1.17
VPS16-208ENST00000487461 K7EN84 100 aa7.76□□□□□ -1.17
VPS16-208ENST00000487461 S100A8P05109 93 aa7.76□□□□□ -1.17
VPS16-208ENST00000487461 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
VPS16-208ENST00000487461 A0A087WYN8 130 aa7.75□□□□□ -1.17
VPS16-208ENST00000487461 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
VPS16-208ENST00000487461 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
VPS16-208ENST00000487461 FOXA3P55318 350 aaPredicted RBP7.75□□□□□ -1.17
VPS16-208ENST00000487461 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
VPS16-208ENST00000487461 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.74□□□□□ -1.17
VPS16-208ENST00000487461 IGKV3OR2-268A0A0C4DH90 116 aa7.74□□□□□ -1.17
VPS16-208ENST00000487461 S100A6P06703 90 aa7.74□□□□□ -1.17
VPS16-208ENST00000487461 S100A12P80511 92 aa7.74□□□□□ -1.17
VPS16-208ENST00000487461 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
VPS16-208ENST00000487461 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
VPS16-208ENST00000487461 RPL39LQ96EH5 51 aaKnown RBP7.74□□□□□ -1.17
VPS16-208ENST00000487461 PLA2G2DQ9UNK4 145 aa7.74□□□□□ -1.17
VPS16-208ENST00000487461 TRBV24-1A0A075B6N3 115 aa7.73□□□□□ -1.17
VPS16-208ENST00000487461 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms