RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 hDV102S1A0JD36 115 aa8.87□□□□□ -0.99
VARS-226ENST00000483275 F2Z2F3 143 aa8.87□□□□□ -0.99
VARS-226ENST00000483275 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
VARS-226ENST00000483275 AP1S3Q96PC3 154 aa8.87□□□□□ -0.99
VARS-226ENST00000483275 RPP21Q9H633 154 aaKnown RBP8.87□□□□□ -0.99
VARS-226ENST00000483275 KIF25-AS1Q9Y6Z4 181 aa8.87□□□□□ -0.99
VARS-226ENST00000483275 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
VARS-226ENST00000483275 ZNF727A8MUV8 499 aa8.86□□□□□ -0.99
VARS-226ENST00000483275 GATCO43716 136 aaKnown RBP8.86□□□□□ -0.99
VARS-226ENST00000483275 REG3AQ06141 175 aa8.86□□□□□ -0.99
VARS-226ENST00000483275 ODF1Q14990 250 aa8.86□□□□□ -0.99
VARS-226ENST00000483275 PEA15Q15121 130 aa8.86□□□□□ -0.99
VARS-226ENST00000483275 RNASE7Q9H1E1 156 aaKnown RBP8.86□□□□□ -0.99
VARS-226ENST00000483275 IGLV4-60A0A075B6I1 120 aa8.85□□□□□ -0.99
VARS-226ENST00000483275 K7EN84 100 aa8.85□□□□□ -0.99
VARS-226ENST00000483275 SLPIP03973 132 aa8.85□□□□□ -0.99
VARS-226ENST00000483275 SRP19P09132 144 aaKnown RBP8.85□□□□□ -0.99
VARS-226ENST00000483275 IGLC6P0CF74 106 aa8.85□□□□□ -0.99
VARS-226ENST00000483275 RAB14P61106 215 aa8.85□□□□□ -0.99
VARS-226ENST00000483275 PKIAP61925 76 aa8.85□□□□□ -0.99
VARS-226ENST00000483275 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.85□□□□□ -0.99
VARS-226ENST00000483275 C20orf203Q8NBC4 194 aa8.85□□□□□ -0.99
VARS-226ENST00000483275 IGHV1-24A0A0C4DH33 117 aa8.84□□□□□ -0.99
VARS-226ENST00000483275 TRGC1P0CF51 173 aa8.84□□□□□ -0.99
VARS-226ENST00000483275 IQCJQ1A5X6 159 aa8.84□□□□□ -0.99
VARS-226ENST00000483275 SUMO4Q6EEV6 95 aa8.84□□□□□ -0.99
VARS-226ENST00000483275 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
VARS-226ENST00000483275 RNF213Q63HN8 5207 aa8.84□□□□□ -0.99
VARS-226ENST00000483275 A0A087WYN8 130 aa8.83□□□□□ -1
VARS-226ENST00000483275 M0QY20 66 aa8.83□□□□□ -1
VARS-226ENST00000483275 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
VARS-226ENST00000483275 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
VARS-226ENST00000483275 FAM74A3Q4VXF1 159 aa8.83□□□□□ -1
VARS-226ENST00000483275 FAM231DQ6ZW35 169 aa8.83□□□□□ -1
VARS-226ENST00000483275 DPH3Q96FX2 82 aa8.83□□□□□ -1
VARS-226ENST00000483275 SMDT1Q9H4I9 107 aa8.83□□□□□ -1
VARS-226ENST00000483275 IGHV3-64A0A075B6Q5 118 aa8.82□□□□□ -1
VARS-226ENST00000483275 A8MWL6 223 aa8.82□□□□□ -1
VARS-226ENST00000483275 TWIST1Q15672 202 aa8.82□□□□□ -1
VARS-226ENST00000483275 TMEM97Q5BJF2 176 aa8.82□□□□□ -1
VARS-226ENST00000483275 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
VARS-226ENST00000483275 BORCS7Q96B45 105 aa8.82□□□□□ -1
VARS-226ENST00000483275 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
VARS-226ENST00000483275 H7C1H1 209 aa8.81□□□□□ -1
VARS-226ENST00000483275 PHOX2AO14813 284 aa8.81□□□□□ -1
VARS-226ENST00000483275 NTF3P20783 257 aa8.81□□□□□ -1
VARS-226ENST00000483275 TMEM241Q24JQ0 296 aa8.81□□□□□ -1
VARS-226ENST00000483275 WDR73Q6P4I2 378 aa8.81□□□□□ -1
VARS-226ENST00000483275 Q6ZRU5 148 aa8.81□□□□□ -1
VARS-226ENST00000483275 LINC01551Q86U37 167 aa8.81□□□□□ -1
VARS-226ENST00000483275 SPACA4Q8TDM5 124 aa8.81□□□□□ -1
VARS-226ENST00000483275 TMEM243Q9BU79 118 aa8.81□□□□□ -1
VARS-226ENST00000483275 LRP2P98164 4655 aa8.81□□□□□ -1
VARS-226ENST00000483275 CTRLP40313 264 aa8.8□□□□□ -1
VARS-226ENST00000483275 CT83Q5H943 113 aa8.8□□□□□ -1
VARS-226ENST00000483275 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
VARS-226ENST00000483275 DPH3P1Q9H4G8 78 aa8.8□□□□□ -1
VARS-226ENST00000483275 NAT8Q9UHE5 227 aa8.8□□□□□ -1
VARS-226ENST00000483275 ADIRFQ15847 76 aa8.79□□□□□ -1
VARS-226ENST00000483275 HIGD2BQ4VC39 106 aa8.79□□□□□ -1
VARS-226ENST00000483275 C15orf56Q8N910 161 aa8.79□□□□□ -1
VARS-226ENST00000483275 OSTCQ9NRP0 149 aa8.79□□□□□ -1
VARS-226ENST00000483275 AP5S1Q9NUS5 200 aa8.79□□□□□ -1
VARS-226ENST00000483275 IGKV2-24A0A0C4DH68 120 aa8.78□□□□□ -1
VARS-226ENST00000483275 GAGE12HA6NDE8 117 aa8.78□□□□□ -1
VARS-226ENST00000483275 PGLYRP4Q96LB8 373 aa8.78□□□□□ -1
VARS-226ENST00000483275 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
VARS-226ENST00000483275 AMTP48728 403 aa8.77□□□□□ -1.01
VARS-226ENST00000483275 RPL23P62829 140 aaKnown RBP8.77□□□□□ -1.01
VARS-226ENST00000483275 SRSF3P84103 164 aaKnown RBP8.77□□□□□ -1.01
VARS-226ENST00000483275 COX6A2Q02221 97 aa8.77□□□□□ -1.01
VARS-226ENST00000483275 RASL11AQ6T310 242 aa8.77□□□□□ -1.01
VARS-226ENST00000483275 TSKUQ8WUA8 353 aa8.77□□□□□ -1.01
VARS-226ENST00000483275 GTSF1Q8WW33 167 aa8.77□□□□□ -1.01
VARS-226ENST00000483275 ISOC2Q96AB3 205 aa8.77□□□□□ -1.01
VARS-226ENST00000483275 CNFNQ9BYD5 112 aa8.77□□□□□ -1.01
VARS-226ENST00000483275 TRAV8-4A0A0B4J246 113 aa8.76□□□□□ -1.01
VARS-226ENST00000483275 TRAV26-2A0A0B4J265 109 aa8.76□□□□□ -1.01
VARS-226ENST00000483275 C9JQL5 133 aa8.76□□□□□ -1.01
VARS-226ENST00000483275 UBE2L6O14933 153 aa8.76□□□□□ -1.01
VARS-226ENST00000483275 MAJINQ3KP22 176 aa8.76□□□□□ -1.01
VARS-226ENST00000483275 PRSS3P2Q8NHM4 247 aa8.76□□□□□ -1.01
VARS-226ENST00000483275 PLAC8Q9NZF1 115 aa8.76□□□□□ -1.01
VARS-226ENST00000483275 A0A1B0GUV1 79 aa8.75□□□□□ -1.01
VARS-226ENST00000483275 FAM231BA6NCW3 169 aa8.75□□□□□ -1.01
VARS-226ENST00000483275 HIGD1CA8MV81 97 aa8.75□□□□□ -1.01
VARS-226ENST00000483275 RNF185Q96GF1 192 aa8.75□□□□□ -1.01
VARS-226ENST00000483275 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
VARS-226ENST00000483275 FOXA3P55318 350 aaPredicted RBP8.74□□□□□ -1.01
VARS-226ENST00000483275 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
VARS-226ENST00000483275 C7orf33Q8WU49 177 aa8.74□□□□□ -1.01
VARS-226ENST00000483275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
VARS-226ENST00000483275 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
VARS-226ENST00000483275 RIGQ13278 110 aa8.73□□□□□ -1.01
VARS-226ENST00000483275 COTL1Q14019 142 aa8.73□□□□□ -1.01
VARS-226ENST00000483275 CLLU1Q5K131 121 aa8.73□□□□□ -1.01
VARS-226ENST00000483275 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
VARS-226ENST00000483275 NAT8BQ9UHF3 227 aa8.73□□□□□ -1.01
VARS-226ENST00000483275 V9GYV3 84 aa8.73□□□□□ -1.01
VARS-226ENST00000483275 A0A096LNI7 61 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms