RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 MAFIPQ8WZ33 124 aa-0.29□□□□□ -2.46
CLCC1-208ENST00000473062 PFDN5Q99471 154 aa-0.29□□□□□ -2.46
CLCC1-208ENST00000473062 TPT1P8Q9HAU6 139 aa-0.29□□□□□ -2.46
CLCC1-208ENST00000473062 SCN3BQ9NY72 215 aa-0.29□□□□□ -2.46
CLCC1-208ENST00000473062 ADGRB1O14514 1584 aa-0.29□□□□□ -2.46
CLCC1-208ENST00000473062 PARP14Q460N5 1801 aa-0.29□□□□□ -2.46
CLCC1-208ENST00000473062 ZNF518AQ6AHZ1 1483 aa-0.29□□□□□ -2.46
CLCC1-208ENST00000473062 MYH13Q9UKX3 1938 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 BIVM-ERCC5R4GMW8 1640 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 CDK5RAP2Q96SN8 1893 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 PITX3O75364 302 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 SIX6O95475 246 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 ANP32BQ92688 251 aaKnown RBP-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 ZMYM4Q5VZL5 1548 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 PXDNQ92626 1479 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 IFT140Q96RY7 1462 aa-0.3□□□□□ -2.46
CLCC1-208ENST00000473062 HECTD4Q9Y4D8 3996 aa-0.31□□□□□ -2.46
CLCC1-208ENST00000473062 RPS25P62851 125 aaKnown RBP-0.31□□□□□ -2.46
CLCC1-208ENST00000473062 SMIM21Q3B7S5 101 aa-0.31□□□□□ -2.46
CLCC1-208ENST00000473062 C12orf73Q69YU5 71 aa-0.31□□□□□ -2.46
CLCC1-208ENST00000473062 SRRM2Q9UQ35 2752 aaKnown RBP-0.32□□□□□ -2.46
CLCC1-208ENST00000473062 MAP1BP46821 2468 aaKnown RBP-0.32□□□□□ -2.46
CLCC1-208ENST00000473062 PPP1R17O96001 155 aa-0.32□□□□□ -2.46
CLCC1-208ENST00000473062 CCL18P55774 89 aa-0.32□□□□□ -2.46
CLCC1-208ENST00000473062 CSMD3Q7Z407 3707 aa-0.32□□□□□ -2.46
CLCC1-208ENST00000473062 ZANQ9Y493 2812 aa-0.32□□□□□ -2.46
CLCC1-208ENST00000473062 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
CLCC1-208ENST00000473062 DCDP81605 110 aaKnown RBP-0.33□□□□□ -2.46
CLCC1-208ENST00000473062 COX17Q14061 63 aa-0.33□□□□□ -2.46
CLCC1-208ENST00000473062 S100A7L2Q5SY68 101 aa-0.33□□□□□ -2.46
CLCC1-208ENST00000473062 PKD1L1Q8TDX9 2849 aa-0.33□□□□□ -2.46
CLCC1-208ENST00000473062 SPAARA0A1B0GVQ0 90 aa-0.34□□□□□ -2.46
CLCC1-208ENST00000473062 DCHS2Q6V1P9 2916 aa-0.34□□□□□ -2.46
CLCC1-208ENST00000473062 FAT2Q9NYQ8 4349 aa-0.34□□□□□ -2.46
CLCC1-208ENST00000473062 FAT1Q14517 4588 aa-0.35□□□□□ -2.47
CLCC1-208ENST00000473062 TRAV13-2A0A0B4J235 113 aa-0.35□□□□□ -2.47
CLCC1-208ENST00000473062 CTXND1A0A1B0GTU2 59 aa-0.35□□□□□ -2.47
CLCC1-208ENST00000473062 LENEPQ9Y5L5 61 aa-0.35□□□□□ -2.47
CLCC1-208ENST00000473062 TNXBP22105 4242 aa-0.35□□□□□ -2.47
CLCC1-208ENST00000473062 SPTBN1Q01082 2364 aaKnown RBP-0.35□□□□□ -2.47
CLCC1-208ENST00000473062 ACANP16112 2415 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 SIPA1L3O60292 1781 aaPredicted RBP-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 KMT2CQ8NEZ4 4911 aaKnown RBP-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 HCG22E2RYF7 251 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 M0R135 149 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 SPRR2DP22532 72 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 SPAG11BQ08648 103 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 KRTAP19-7Q3SYF9 63 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 C10orf128Q5T292 105 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 SDF2Q99470 211 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 PLCE1Q9P212 2302 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 LRP1BQ9NZR2 4599 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 CHD6Q8TD26 2715 aa-0.36□□□□□ -2.47
CLCC1-208ENST00000473062 CASKIN1Q8WXD9 1431 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 PIEZO2Q9H5I5 2752 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 MYH9P35579 1960 aaKnown RBP-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 HAMPP81172 84 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 SPAG11AQ6PDA7 123 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 DPH3Q96FX2 82 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 TP53AIP1Q9HCN2 124 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 TENM2Q9NT68 2774 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 CREBBPQ92793 2442 aa-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 MUC22E2RYF6 1773 aaPredicted RBP-0.37□□□□□ -2.47
CLCC1-208ENST00000473062 SPRR1AP35321 89 aa-0.38□□□□□ -2.47
CLCC1-208ENST00000473062 ARPC4P59998 168 aa-0.38□□□□□ -2.47
CLCC1-208ENST00000473062 PIGYQ3MUY2 71 aa-0.38□□□□□ -2.47
CLCC1-208ENST00000473062 PDCD10Q9BUL8 212 aa-0.38□□□□□ -2.47
CLCC1-208ENST00000473062 PKHD1P08F94 4074 aa-0.38□□□□□ -2.47
CLCC1-208ENST00000473062 PDZD2O15018 2839 aa-0.39□□□□□ -2.47
CLCC1-208ENST00000473062 APOC3P02656 99 aa-0.39□□□□□ -2.47
CLCC1-208ENST00000473062 TPPP2P59282 170 aa-0.39□□□□□ -2.47
CLCC1-208ENST00000473062 TTC9CQ8N5M4 171 aa-0.39□□□□□ -2.47
CLCC1-208ENST00000473062 V9GYH0 126 aa-0.39□□□□□ -2.47
CLCC1-208ENST00000473062 ARFGEF1Q9Y6D6 1849 aa-0.39□□□□□ -2.47
CLCC1-208ENST00000473062 IFT172Q9UG01 1749 aa-0.39□□□□□ -2.47
CLCC1-208ENST00000473062 SETXQ7Z333 2677 aaKnown RBP-0.4□□□□□ -2.47
CLCC1-208ENST00000473062 MYH6P13533 1939 aa-0.4□□□□□ -2.47
CLCC1-208ENST00000473062 BCE1O60756 84 aa-0.4□□□□□ -2.47
CLCC1-208ENST00000473062 PRM1P04553 51 aa-0.4□□□□□ -2.47
CLCC1-208ENST00000473062 SELENOWP63302 87 aa-0.4□□□□□ -2.47
CLCC1-208ENST00000473062 TMEM170BQ5T4T1 132 aa-0.4□□□□□ -2.47
CLCC1-208ENST00000473062 ERCC6L2Q5T890 1561 aa-0.4□□□□□ -2.47
CLCC1-208ENST00000473062 NBEAL1Q6ZS30 2694 aa-0.41□□□□□ -2.47
CLCC1-208ENST00000473062 PI4KAP42356 2102 aa-0.41□□□□□ -2.47
CLCC1-208ENST00000473062 WNK1Q9H4A3 2382 aa-0.41□□□□□ -2.47
CLCC1-208ENST00000473062 LOC730098B7Z3J9 87 aa-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 UQCR11O14957 56 aa-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 SNRNP25Q9BV90 132 aaKnown RBP-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 AGPAT4-IT1Q9H0P7 198 aa-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 RERGLQ9H628 205 aa-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 VWFP04275 2813 aa-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 PRKDCP78527 4128 aaKnown RBP-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 PPIP5K1Q6PFW1 1433 aa-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 GRIN2AQ12879 1464 aa-0.41□□□□□ -2.48
CLCC1-208ENST00000473062 STAB2Q8WWQ8 2551 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 FXYD6-FXYD2A0A087WZ82 144 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 TRBV6-1A0A0K0K1D8 114 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 HIST1H1DP16402 221 aaKnown RBP-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 PPP3R2Q96LZ3 170 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 NAA60Q9H7X0 242 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms