RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 GTSF1LQ9H1H1 148 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 IL36BQ9NZH7 164 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 NAT8Q9UHE5 227 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 PHLDA3Q9Y5J5 127 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 URGCP-MRPS24S4R325 110 aa8.88□□□□□ -0.99
LTA-215ENST00000471842 A0A087WWL8 130 aa8.87□□□□□ -0.99
LTA-215ENST00000471842 TIRAPP58753 221 aa8.87□□□□□ -0.99
LTA-215ENST00000471842 LINC01556Q5JQF7 62 aa8.87□□□□□ -0.99
LTA-215ENST00000471842 LELP1Q5T871 98 aa8.87□□□□□ -0.99
LTA-215ENST00000471842 ZFP2Q6ZN57 461 aa8.87□□□□□ -0.99
LTA-215ENST00000471842 C14orf178Q8N769 122 aaPredicted RBP8.87□□□□□ -0.99
LTA-215ENST00000471842 PTH2Q96A98 100 aa8.87□□□□□ -0.99
LTA-215ENST00000471842 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
LTA-215ENST00000471842 LTAP01374 205 aa8.86□□□□□ -0.99
LTA-215ENST00000471842 HSPG2P98160 4391 aa8.86□□□□□ -0.99
LTA-215ENST00000471842 ESDP10768 282 aa8.85□□□□□ -0.99
LTA-215ENST00000471842 Q8N1X5 172 aa8.85□□□□□ -0.99
LTA-215ENST00000471842 Q8N3U1 123 aa8.85□□□□□ -0.99
LTA-215ENST00000471842 RHODO00212 210 aa8.84□□□□□ -0.99
LTA-215ENST00000471842 Q9UF83 564 aa8.84□□□□□ -0.99
LTA-215ENST00000471842 DNAH5Q8TE73 4624 aa8.84□□□□□ -0.99
LTA-215ENST00000471842 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
LTA-215ENST00000471842 IGLV5-52A0A0A0MRZ9 124 aa8.83□□□□□ -1
LTA-215ENST00000471842 IBA57-AS1B1ANH7 110 aa8.83□□□□□ -1
LTA-215ENST00000471842 CTRLP40313 264 aa8.83□□□□□ -1
LTA-215ENST00000471842 LINC01559Q495D7 138 aa8.83□□□□□ -1
LTA-215ENST00000471842 SFRP2Q96HF1 295 aa8.83□□□□□ -1
LTA-215ENST00000471842 MUC21A0A0G2JKD1 596 aa8.83□□□□□ -1
LTA-215ENST00000471842 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
LTA-215ENST00000471842 MUC21A0A140T8X8 626 aa8.83□□□□□ -1
LTA-215ENST00000471842 KRTAP10-1P60331 282 aa8.83□□□□□ -1
LTA-215ENST00000471842 PIK3CD-AS1Q5SR53 167 aa8.83□□□□□ -1
LTA-215ENST00000471842 Q6ZN92 141 aa8.83□□□□□ -1
LTA-215ENST00000471842 BAGE2Q86Y30 109 aa8.83□□□□□ -1
LTA-215ENST00000471842 MBD3L1Q8WWY6 194 aa8.83□□□□□ -1
LTA-215ENST00000471842 IGLC3P0DOY3 106 aa8.82□□□□□ -1
LTA-215ENST00000471842 GCSHP23434 173 aa8.82□□□□□ -1
LTA-215ENST00000471842 HAMPP81172 84 aa8.82□□□□□ -1
LTA-215ENST00000471842 ZNF56Q15929 161 aa8.82□□□□□ -1
LTA-215ENST00000471842 UFSP1Q6NVU6 142 aa8.82□□□□□ -1
LTA-215ENST00000471842 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
LTA-215ENST00000471842 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
LTA-215ENST00000471842 SIGMAR1Q99720 223 aa8.82□□□□□ -1
LTA-215ENST00000471842 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
LTA-215ENST00000471842 GNG13Q9P2W3 67 aa8.82□□□□□ -1
LTA-215ENST00000471842 PAM16Q9Y3D7 125 aa8.82□□□□□ -1
LTA-215ENST00000471842 LECT2O14960 151 aa8.81□□□□□ -1
LTA-215ENST00000471842 LINC00694P0DN24 101 aa8.81□□□□□ -1
LTA-215ENST00000471842 CKS1BP61024 79 aa8.81□□□□□ -1
LTA-215ENST00000471842 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
LTA-215ENST00000471842 OR10AG1Q8NH19 301 aa8.8□□□□□ -1
LTA-215ENST00000471842 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
LTA-215ENST00000471842 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
LTA-215ENST00000471842 EPM2AB3EWF7 344 aa8.79□□□□□ -1
LTA-215ENST00000471842 TSPAN13O95857 204 aa8.79□□□□□ -1
LTA-215ENST00000471842 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
LTA-215ENST00000471842 SPATA45Q537H7 98 aa8.79□□□□□ -1
LTA-215ENST00000471842 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
LTA-215ENST00000471842 KCNIP4Q6PIL6 250 aa8.79□□□□□ -1
LTA-215ENST00000471842 Q8N814 137 aa8.79□□□□□ -1
LTA-215ENST00000471842 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
LTA-215ENST00000471842 MRAP2Q96G30 205 aa8.79□□□□□ -1
LTA-215ENST00000471842 DERL1Q9BUN8 251 aa8.79□□□□□ -1
LTA-215ENST00000471842 TPPP3Q9BW30 176 aa8.79□□□□□ -1
LTA-215ENST00000471842 TM2D2Q9BX73 214 aa8.79□□□□□ -1
LTA-215ENST00000471842 MANBALQ9NQG1 85 aa8.79□□□□□ -1
LTA-215ENST00000471842 LRCOL1A6NCL2 159 aa8.78□□□□□ -1
LTA-215ENST00000471842 F5H697 171 aa8.78□□□□□ -1
LTA-215ENST00000471842 CCL20P78556 96 aa8.78□□□□□ -1
LTA-215ENST00000471842 LAGE3Q14657 143 aa8.78□□□□□ -1
LTA-215ENST00000471842 GTF2H5Q6ZYL4 71 aa8.78□□□□□ -1
LTA-215ENST00000471842 A0A087WX48 190 aa8.77□□□□□ -1
LTA-215ENST00000471842 TRAV8-3A0A0A6YYJ7 113 aa8.77□□□□□ -1
LTA-215ENST00000471842 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1
LTA-215ENST00000471842 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.77□□□□□ -1.01
LTA-215ENST00000471842 TMEM262E9PQX1 116 aa8.77□□□□□ -1.01
LTA-215ENST00000471842 XGP55808 180 aa8.77□□□□□ -1.01
LTA-215ENST00000471842 PMCHL1Q16048 86 aa8.77□□□□□ -1.01
LTA-215ENST00000471842 CENPWQ5EE01 88 aa8.77□□□□□ -1.01
LTA-215ENST00000471842 NTN5Q8WTR8 489 aaPredicted RBP8.77□□□□□ -1.01
LTA-215ENST00000471842 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
LTA-215ENST00000471842 TRBV7-3A0A075B6L6 115 aa8.76□□□□□ -1.01
LTA-215ENST00000471842 IGKV2D-24A0A075B6R9 120 aa8.76□□□□□ -1.01
LTA-215ENST00000471842 WFDC2Q14508 124 aa8.76□□□□□ -1.01
LTA-215ENST00000471842 Q5VSD8 79 aa8.76□□□□□ -1.01
LTA-215ENST00000471842 UBE2WQ96B02 151 aa8.76□□□□□ -1.01
LTA-215ENST00000471842 DAZAP1Q96EP5 407 aaKnown RBP8.76□□□□□ -1.01
LTA-215ENST00000471842 MLST8Q9BVC4 326 aa8.76□□□□□ -1.01
LTA-215ENST00000471842 TRBV10-1A0A0K0K1A3 114 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 IFNA1P01562 189 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 MGPP08493 103 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 HINT1P49773 126 aaPredicted RBP8.75□□□□□ -1.01
LTA-215ENST00000471842 GNG4P50150 75 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 UBE2D3P61077 147 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 UBE2D2P62837 147 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 BAALCQ8WXS3 180 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 RMI2Q96E14 147 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 DNAJC30Q96LL9 226 aa8.75□□□□□ -1.01
LTA-215ENST00000471842 TAX1BP3O14907 124 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms