RNA–Protein interactions for RNA: ENST00000468993.1

SMG5-202, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 345 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-202ENST00000468993 HLA-DRB4P13762 266 aa2.82□□□□□ -1.96
SMG5-202ENST00000468993 DIAPH2-AS1Q14236 149 aa2.82□□□□□ -1.96
SMG5-202ENST00000468993 CDK5R1Q15078 307 aa2.82□□□□□ -1.96
SMG5-202ENST00000468993 PYDC2Q56P42 97 aa2.82□□□□□ -1.96
SMG5-202ENST00000468993 TMEM91Q6ZNR0 172 aa2.82□□□□□ -1.96
SMG5-202ENST00000468993 POP5Q969H6 163 aaKnown RBP2.82□□□□□ -1.96
SMG5-202ENST00000468993 NDUFB11Q9NX14 153 aa2.82□□□□□ -1.96
SMG5-202ENST00000468993 HLA-DRB4X5D2U9 266 aa2.82□□□□□ -1.96
SMG5-202ENST00000468993 TRAV27A0A087WT01 109 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.81□□□□□ -1.96
SMG5-202ENST00000468993 MUC21A0A0G2JKD1 596 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 MUC21A0A140T8X8 626 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 ZNF670-ZNF695F2Z2N8 137 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 OR1I1O60431 355 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 HBDP02042 147 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 PMP2P02689 132 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 DSCR4P56555 118 aaPredicted RBP2.81□□□□□ -1.96
SMG5-202ENST00000468993 CCSMST1Q4G0I0 132 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 TEN1Q86WV5 123 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 Q8IYB0 196 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 CMTM2Q8TAZ6 248 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 Q9BRP9 147 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 DYNLRB1Q9NP97 96 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 LY96Q9Y6Y9 160 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 SNRNP200O75643 2136 aaKnown RBP2.81□□□□□ -1.96
SMG5-202ENST00000468993 PLCE1Q9P212 2302 aa2.81□□□□□ -1.96
SMG5-202ENST00000468993 MED12LQ86YW9 2145 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 C9orf170A2RU37 121 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 HMSDA8MTL9 139 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 K7EIL1 84 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 LYRM1O43325 122 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 AZU1P20160 251 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 TMEM258P61165 79 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 MRPS10P82664 201 aaKnown RBP2.8□□□□□ -1.96
SMG5-202ENST00000468993 ZNF345Q14585 488 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 OCIAD2Q56VL3 154 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 SPANXN5Q5MJ07 72 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 ZNF826PQ6ZT77 177 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 OR8B3Q8NGG8 313 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 RETNLBQ9BQ08 111 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 TMEM191AQ9H0A3 160 aa2.8□□□□□ -1.96
SMG5-202ENST00000468993 DNAH7Q8WXX0 4024 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 FAM236AA0A1B0GUQ0 79 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 FAM236BA0A1B0GV22 79 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 C17orf112F2Z3M2 114 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 CCL22O00626 93 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 RTL8CO15255 209 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 IGKV3-11P04433 115 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 FABP4P15090 132 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 ERHP84090 104 aaKnown RBP2.79□□□□□ -1.96
SMG5-202ENST00000468993 RNASE10Q5GAN6 216 aaKnown RBP2.79□□□□□ -1.96
SMG5-202ENST00000468993 GLIPR1L1Q6UWM5 242 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 OR5D14Q8NGL3 314 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 KRTAP9-8Q9BYQ0 159 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 C14orf132Q9NPU4 83 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 SCN3AQ9NY46 2000 aa2.79□□□□□ -1.96
SMG5-202ENST00000468993 DNAH3Q8TD57 4116 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 IGKV1D-42A0A075B6H8 117 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 TMSB15BA0A087X1C1 80 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 F6UZH7 168 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 BAALC-AS2P0C853 105 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 HIST1H1BP16401 226 aaKnown RBP2.78□□□□□ -1.96
SMG5-202ENST00000468993 ZNF93P35789 620 aaPredicted RBP2.78□□□□□ -1.96
SMG5-202ENST00000468993 GUCA1AP43080 201 aaPredicted RBP2.78□□□□□ -1.96
SMG5-202ENST00000468993 HINT1P49773 126 aaPredicted RBP2.78□□□□□ -1.96
SMG5-202ENST00000468993 ROMO1P60602 79 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 DEDD2Q8WXF8 326 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 C20orf166-AS1Q96NR2 134 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 SDF2Q99470 211 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 KRTAP4-9Q9BYQ8 210 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 CCDC167Q9P0B6 97 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 PRO2289Q9P1D8 64 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 COMMD3Q9UBI1 195 aa2.78□□□□□ -1.96
SMG5-202ENST00000468993 EXPH5Q8NEV8 1989 aa2.78□□□□□ -1.97
SMG5-202ENST00000468993 MUC4Q99102 2169 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 TRAV3A0A0B4J244 114 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 CTSGP08311 255 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 SAA1P0DJI8 122 aaPredicted RBP2.77□□□□□ -1.97
SMG5-202ENST00000468993 MGST1P10620 155 aaKnown RBP2.77□□□□□ -1.97
SMG5-202ENST00000468993 KRTAP10-3P60369 221 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 ZNF181Q2M3W8 571 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 KRTAP13-2Q52LG2 175 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 LINC00471Q8N535 108 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 LINC00311Q8N616 119 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 TCTEX1D1Q8N7M0 179 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 OR4X2Q8NGF9 303 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 HYLS1Q96M11 299 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 PDCD10Q9BUL8 212 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 TPRKBQ9Y3C4 175 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 DNAJC15Q9Y5T4 150 aa2.77□□□□□ -1.97
SMG5-202ENST00000468993 SOX21Q9Y651 276 aaPredicted RBP2.77□□□□□ -1.97
SMG5-202ENST00000468993 NCKAP5O14513 1909 aa2.76□□□□□ -1.97
SMG5-202ENST00000468993 HMCN2Q8NDA2 5059 aa2.76□□□□□ -1.97
SMG5-202ENST00000468993 LOC107986453A0A1B0GWG9 222 aa2.76□□□□□ -1.97
SMG5-202ENST00000468993 LYNX1G3V0Z9 82 aa2.76□□□□□ -1.97
SMG5-202ENST00000468993 M0R233 179 aa2.76□□□□□ -1.97
SMG5-202ENST00000468993 CORTO00230 105 aa2.76□□□□□ -1.97
SMG5-202ENST00000468993 CDC42EP2O14613 210 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms