RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ZNF818PQ6ZRF7 136 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 Q9H521 79 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 TCHHQ07283 1943 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 LRRC37A3O60309 1634 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 MYOM1P52179 1685 aa1.1□□□□□ -2.23
CDC42BPA-211ENST00000466538 MON2Q7Z3U7 1717 aa1.09□□□□□ -2.23
CDC42BPA-211ENST00000466538 TRBV7-1A0A0A6YYK4 115 aa1.09□□□□□ -2.23
CDC42BPA-211ENST00000466538 CCL3L1P16619 93 aa1.09□□□□□ -2.23
CDC42BPA-211ENST00000466538 SNCAP37840 140 aa1.09□□□□□ -2.23
CDC42BPA-211ENST00000466538 MYOZ3Q8TDC0 251 aa1.09□□□□□ -2.23
CDC42BPA-211ENST00000466538 SPTBP11277 2137 aa1.09□□□□□ -2.24
CDC42BPA-211ENST00000466538 ANKRD36BQ8N2N9 1353 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 WNK3Q9BYP7 1800 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 hADV29S1A0JD25 119 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 KRTDAPP60985 99 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 FAM74A4Q5TZK3 123 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 XAF1Q6GPH4 301 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 FAM213BQ8TBF2 198 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 TSLPQ969D9 159 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 LINC00208Q96KT6 92 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 DPY30Q9C005 99 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 CYP4F30PQ9H0H9 118 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 BET1LQ9NYM9 111 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 DOCK11Q5JSL3 2073 aa1.08□□□□□ -2.24
CDC42BPA-211ENST00000466538 PPIP5K1Q6PFW1 1433 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 GOLGA3Q08378 1498 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 IGLC1P0CG04 106 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 UBA52P62987 128 aaKnown RBP1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 SSBP1Q04837 148 aaKnown RBP1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 C10orf128Q5T292 105 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 Q5VV11 94 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 C20orf197Q8N268 126 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 SCP2D1Q9UJQ7 156 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 DIP2CQ9Y2E4 1556 aa1.07□□□□□ -2.24
CDC42BPA-211ENST00000466538 UBR1Q8IWV7 1749 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 CDK13Q14004 1512 aaKnown RBP1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 BAZ1AQ9NRL2 1556 aaPredicted RBP1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 FXYD1O00168 92 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 NCR3O14931 201 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 CAV3P56539 151 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 ELOF1P60002 83 aaKnown RBP1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 GNG11P61952 73 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 Q6ZQY7 126 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 Q86TA4 180 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 TOP2BQ02880 1626 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 SCN7AQ01118 1682 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 PPLO60437 1756 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 NSD3Q9BZ95 1437 aa1.06□□□□□ -2.24
CDC42BPA-211ENST00000466538 ABCC3O15438 1527 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 NCOA6Q14686 2063 aaPredicted RBP1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 TRBV7-3A0A075B6L6 115 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 NAP1L6A6NFF2 107 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 C10orf142B7Z368 130 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 UBE2D3P61077 147 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 UBE2D2P62837 147 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 ZNF56Q15929 161 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 PYY3Q5JQD4 70 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 COX7B2Q8TF08 81 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 NPVFQ9HCQ7 196 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 RGPD4Q7Z3J3 1758 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 SPAG17Q6Q759 2223 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 ARHGAP35Q9NRY4 1499 aa1.05□□□□□ -2.24
CDC42BPA-211ENST00000466538 TRBV30A0A0K0K1B3 111 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 TRBV7-7A0A0K0K1E9 115 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 A0A1W2PPM0 123 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 GNGT2O14610 69 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 FAM167A-AS1Q96KT0 104 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 Q96NJ1 140 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 CCL19Q99731 98 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 VAMP8Q9BV40 100 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 NDUFA4L2Q9NRX3 87 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 UQCR10Q9UDW1 63 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 V9GYS6 101 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 V9GYV3 84 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 MRC1P22897 1456 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 PLEKHH2Q8IVE3 1493 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 MED13LQ71F56 2210 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 HMGXB3Q12766 1538 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 ARHGEF12Q9NZN5 1544 aa1.04□□□□□ -2.24
CDC42BPA-211ENST00000466538 RGPD3A6NKT7 1758 aaPredicted RBP1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 ZNF236Q9UL36 1845 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 TRAV22A0A0B4J277 110 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 PPP1R17O96001 155 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 EFNA4P52798 201 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 EDDM3BP56851 147 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 KLKP1Q107X0 134 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 C10orf99Q6UWK7 81 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 BPESC1Q9GZL8 116 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 CDC42SE2Q9NRR3 84 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 IFT172Q9UG01 1749 aa1.03□□□□□ -2.24
CDC42BPA-211ENST00000466538 LOC285095A0A1B0GVY8 99 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 CRYM-AS1A6NIL9 109 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 CCL18P55774 89 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 SEC11AP67812 179 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 PRB3Q04118 309 aaPredicted RBP1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 CEP162Q5TB80 1403 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 LINC00575Q6W349 94 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 EHBP1L1Q8N3D4 1523 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 MGST2Q99735 147 aa1.02□□□□□ -2.25
CDC42BPA-211ENST00000466538 MANBALQ9NQG1 85 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms