RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 PPP1R17O96001 155 aa-0.56□□□□□ -2.5
PTPN12-210ENST00000464313 DPH3Q96FX2 82 aa-0.56□□□□□ -2.5
PTPN12-210ENST00000464313 PLXNB2O15031 1838 aa-0.57□□□□□ -2.5
PTPN12-210ENST00000464313 SIX6O95475 246 aa-0.57□□□□□ -2.5
PTPN12-210ENST00000464313 HIST1H1DP16402 221 aaKnown RBP-0.57□□□□□ -2.5
PTPN12-210ENST00000464313 ALX1Q15699 326 aa-0.57□□□□□ -2.5
PTPN12-210ENST00000464313 ZNF609O15014 1411 aa-0.57□□□□□ -2.5
PTPN12-210ENST00000464313 PKD1L1Q8TDX9 2849 aa-0.57□□□□□ -2.5
PTPN12-210ENST00000464313 PLCE1Q9P212 2302 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 PTPN13Q12923 2485 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 KMT2AQ03164 3969 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 ZNF518AQ6AHZ1 1483 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 SPEF2Q9C093 1822 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 HAMPP81172 84 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 RBM3P98179 157 aaKnown RBP-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 SMCO1Q147U7 214 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 Q5VSD8 79 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 TMEM191AQ9H0A3 160 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 R4GMQ9 66 aa-0.58□□□□□ -2.5
PTPN12-210ENST00000464313 WNK3Q9BYP7 1800 aa-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 IFT140Q96RY7 1462 aa-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 MYH8P13535 1937 aa-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 M0R135 149 aa-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 Q8IZM0 81 aa-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 TCEAL4Q96EI5 215 aa-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 SPCS1Q9Y6A9 102 aa-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 PPRC1Q5VV67 1664 aaKnown RBP-0.59□□□□□ -2.5
PTPN12-210ENST00000464313 KMT2CQ8NEZ4 4911 aaKnown RBP-0.6□□□□□ -2.51
PTPN12-210ENST00000464313 PRDM2Q13029 1718 aa-0.6□□□□□ -2.51
PTPN12-210ENST00000464313 NWD2Q9ULI1 1742 aa-0.6□□□□□ -2.51
PTPN12-210ENST00000464313 SPRR1AP35321 89 aa-0.6□□□□□ -2.51
PTPN12-210ENST00000464313 SPAG11BQ08648 103 aa-0.6□□□□□ -2.51
PTPN12-210ENST00000464313 C10orf128Q5T292 105 aa-0.6□□□□□ -2.51
PTPN12-210ENST00000464313 PCLOQ9Y6V0 5065 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 LRP2P98164 4655 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 NEBP20929 6669 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 TRAV13-2A0A0B4J235 113 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 CTXND1A0A1B0GTU2 59 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 PRM1P04553 51 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 SPRR2DP22532 72 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 AGPAT4-IT1Q9H0P7 198 aa-0.61□□□□□ -2.51
PTPN12-210ENST00000464313 KDM3BQ7LBC6 1761 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 VWFP04275 2813 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 LAMC1P11047 1609 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 AQP10Q96PS8 301 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 PDCD10Q9BUL8 212 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 MRC1P22897 1456 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 MYCBP2O75592 4640 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 STAB1Q9NY15 2570 aa-0.62□□□□□ -2.51
PTPN12-210ENST00000464313 LPAP08519 4548 aa-0.63□□□□□ -2.51
PTPN12-210ENST00000464313 LRP6O75581 1613 aa-0.63□□□□□ -2.51
PTPN12-210ENST00000464313 ZNF236Q9UL36 1845 aa-0.63□□□□□ -2.51
PTPN12-210ENST00000464313 SPAARA0A1B0GVQ0 90 aa-0.63□□□□□ -2.51
PTPN12-210ENST00000464313 SPAG11AQ6PDA7 123 aa-0.63□□□□□ -2.51
PTPN12-210ENST00000464313 CCDC167Q9P0B6 97 aa-0.63□□□□□ -2.51
PTPN12-210ENST00000464313 CHD6Q8TD26 2715 aa-0.64□□□□□ -2.51
PTPN12-210ENST00000464313 MUC2Q02817 5179 aa-0.64□□□□□ -2.51
PTPN12-210ENST00000464313 DOCK1Q14185 1865 aa-0.64□□□□□ -2.51
PTPN12-210ENST00000464313 TTC9CQ8N5M4 171 aa-0.64□□□□□ -2.51
PTPN12-210ENST00000464313 SMIM4Q8WVI0 70 aa-0.64□□□□□ -2.51
PTPN12-210ENST00000464313 LSM10Q969L4 123 aaKnown RBP-0.64□□□□□ -2.51
PTPN12-210ENST00000464313 PFDN5Q99471 154 aa-0.64□□□□□ -2.51
PTPN12-210ENST00000464313 USF3Q68DE3 2245 aa-0.65□□□□□ -2.51
PTPN12-210ENST00000464313 PXDNQ92626 1479 aa-0.65□□□□□ -2.51
PTPN12-210ENST00000464313 ARPC4P59998 168 aa-0.65□□□□□ -2.51
PTPN12-210ENST00000464313 Q8N8P6 123 aa-0.65□□□□□ -2.51
PTPN12-210ENST00000464313 ARAP2Q8WZ64 1704 aa-0.65□□□□□ -2.51
PTPN12-210ENST00000464313 UNC13AQ9UPW8 1703 aa-0.65□□□□□ -2.51
PTPN12-210ENST00000464313 ERCC6L2Q5T890 1561 aa-0.66□□□□□ -2.51
PTPN12-210ENST00000464313 TP53AIP1Q9HCN2 124 aa-0.66□□□□□ -2.52
PTPN12-210ENST00000464313 V9GYH0 126 aa-0.66□□□□□ -2.52
PTPN12-210ENST00000464313 MYOM3Q5VTT5 1437 aa-0.66□□□□□ -2.52
PTPN12-210ENST00000464313 FXYD6-FXYD2A0A087WZ82 144 aa-0.67□□□□□ -2.52
PTPN12-210ENST00000464313 S100A3P33764 101 aa-0.67□□□□□ -2.52
PTPN12-210ENST00000464313 LENEPQ9Y5L5 61 aa-0.67□□□□□ -2.52
PTPN12-210ENST00000464313 C10orf71Q711Q0 1435 aa-0.67□□□□□ -2.52
PTPN12-210ENST00000464313 FLNAP21333 2647 aaKnown RBP-0.68□□□□□ -2.52
PTPN12-210ENST00000464313 PATJQ8NI35 1801 aa-0.68□□□□□ -2.52
PTPN12-210ENST00000464313 I3L2K1 104 aa-0.68□□□□□ -2.52
PTPN12-210ENST00000464313 SRRM2Q9UQ35 2752 aaKnown RBP-0.68□□□□□ -2.52
PTPN12-210ENST00000464313 TNXBP22105 4242 aa-0.68□□□□□ -2.52
PTPN12-210ENST00000464313 GRIN2AQ12879 1464 aa-0.68□□□□□ -2.52
PTPN12-210ENST00000464313 PI4KAP42356 2102 aa-0.68□□□□□ -2.52
PTPN12-210ENST00000464313 PIGBOS1A0A0B4J2F0 54 aa-0.69□□□□□ -2.52
PTPN12-210ENST00000464313 TMEM170BQ5T4T1 132 aa-0.69□□□□□ -2.52
PTPN12-210ENST00000464313 DCHS2Q6V1P9 2916 aa-0.69□□□□□ -2.52
PTPN12-210ENST00000464313 PPIP5K1Q6PFW1 1433 aa-0.7□□□□□ -2.52
PTPN12-210ENST00000464313 DCDP81605 110 aaKnown RBP-0.7□□□□□ -2.52
PTPN12-210ENST00000464313 AMELXQ99217 191 aa-0.7□□□□□ -2.52
PTPN12-210ENST00000464313 LINC00472Q9H8W2 130 aa-0.7□□□□□ -2.52
PTPN12-210ENST00000464313 ZANQ9Y493 2812 aa-0.7□□□□□ -2.52
PTPN12-210ENST00000464313 DOPEY1Q5JWR5 2465 aa-0.71□□□□□ -2.52
PTPN12-210ENST00000464313 SPTBN1Q01082 2364 aaKnown RBP-0.71□□□□□ -2.52
PTPN12-210ENST00000464313 COPS9Q8WXC6 57 aa-0.71□□□□□ -2.52
PTPN12-210ENST00000464313 RERGLQ9H628 205 aa-0.71□□□□□ -2.52
PTPN12-210ENST00000464313 SERP1Q9Y6X1 66 aa-0.71□□□□□ -2.52
PTPN12-210ENST00000464313 LRRC37A2A6NM11 1700 aa-0.72□□□□□ -2.52
PTPN12-210ENST00000464313 CFTRP13569 1480 aa-0.72□□□□□ -2.52
PTPN12-210ENST00000464313 FAT2Q9NYQ8 4349 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms