RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SS18L2Q9UHA2 77 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 VPREB3Q9UKI3 123 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 COL6A3P12111 3177 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 CACNA1HO95180 2353 aa2.56□□□□□ -2
COL8A1-204ENST00000462604 ANKHD1Q8IWZ3 2542 aaKnown RBP2.56□□□□□ -2
COL8A1-204ENST00000462604 IGHV3-38A0A0C4DH36 116 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 IGLV5-39A0A0G2JS06 123 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 RBMY1BA6NDE4 496 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 RBMY1EA6NEQ0 496 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 PCNX2A6NKB5 2137 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 B5MCH6 92 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 COX7A2LO14548 114 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 CRLF1O75462 422 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 AVPP01185 164 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 RBMY1DP0C7P1 496 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 SLURP1P55000 103 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 PROK1P58294 105 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 RPL36AP83881 106 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 DAZ2Q13117 558 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 BEAN1Q3B7T3 259 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 Q6ZSN1 163 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 FAM19A3Q7Z5A8 133 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 DAZ4Q86SG3 579 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 C11orf72Q8NBR9 251 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 LINC00308Q8TCZ7 52 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 C4orf3Q8WVX3 66 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 RPL36ALQ969Q0 106 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 FAM104AQ969W3 186 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 PPDPFQ9H3Y8 114 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 HEATR1Q9H583 2144 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 Q9H8V8 135 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 MAP6D1Q9H9H5 199 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 DAZ3Q9NR90 486 aaKnown RBP2.55□□□□□ -2
COL8A1-204ENST00000462604 CDKN2A-AS1Q9UH64 79 aa2.55□□□□□ -2
COL8A1-204ENST00000462604 PKDREJQ9NTG1 2253 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 MUC3AQ02505 3323 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 DSPP15924 2871 aaKnown RBP2.54□□□□□ -2
COL8A1-204ENST00000462604 PRRC2CQ9Y520 2896 aaKnown RBP2.54□□□□□ -2
COL8A1-204ENST00000462604 ANKRD11Q6UB99 2663 aaPredicted RBP2.54□□□□□ -2
COL8A1-204ENST00000462604 IGHV3OR16-12A0A075B7B8 117 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 TRGV1A0A0A0MS02 117 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 TRAV13-2A0A0B4J235 113 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 TRAV13-1A0A0B4J241 112 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 TRBV10-1A0A0K0K1A3 114 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 TRBV7-7A0A0K0K1E9 115 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 SMIM1B2RUZ4 78 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 CCDC179H3BU77 68 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 K7EQD1 137 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 UBE2L6O14933 153 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 TRACP01848 142 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 CRPP02741 224 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 ATP5G1P05496 136 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 NHLRC4P0CG21 123 aaPredicted RBP2.54□□□□□ -2
COL8A1-204ENST00000462604 INAFM2P0DMQ5 153 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 FAM222AQ5U5X8 452 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 Q6YL49 198 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 Q6ZSV7 163 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 PRIMA1Q86XR5 153 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 STHQ8IWL8 128 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 DAND5Q8N907 189 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 IL17DQ8TAD2 202 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 TMEM243Q9BU79 118 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 IMUPQ9GZP8 106 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 CSDC2Q9Y534 153 aaKnown RBP2.54□□□□□ -2
COL8A1-204ENST00000462604 EP300Q09472 2414 aaPredicted RBP2.54□□□□□ -2
COL8A1-204ENST00000462604 ASPMQ8IZT6 3477 aa2.54□□□□□ -2
COL8A1-204ENST00000462604 RP1L1Q8IWN7 2480 aaPredicted RBP2.53□□□□□ -2
COL8A1-204ENST00000462604 WDFY4Q6ZS81 3184 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 ARFGEF3Q5TH69 2177 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 TRAV25A0A0B4J276 109 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 A0A0U1RRA0 63 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 A0A1W2PRX2 142 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 FSHBP01225 129 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 BAALC-AS2P0C853 105 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 IGHV4-31P0DP07 118 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 COX6A2Q02221 97 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 DEFB136Q30KP8 78 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 LINC00242Q5T6M2 205 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 SHISA2Q6UWI4 295 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 LINC00643Q86TS7 51 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 Q8N2B8 174 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 ZNF625Q96I27 306 aaPredicted RBP2.53□□□□□ -2
COL8A1-204ENST00000462604 TMEM126AQ9H061 195 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 FAM30AQ9NZY2 134 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 XCL2Q9UBD3 114 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 ICE1Q9Y2F5 2266 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 SVILO95425 2214 aa2.53□□□□□ -2
COL8A1-204ENST00000462604 LOC400499M0QZD8 3231 aa2.53□□□□□ -2.01
COL8A1-204ENST00000462604 PLXNB1O43157 2135 aa2.53□□□□□ -2.01
COL8A1-204ENST00000462604 ROS1P08922 2347 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 ZNF318Q5VUA4 2279 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 CFAP47Q6ZTR5 3102 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 ZFHX2Q9C0A1 2572 aaPredicted RBP2.52□□□□□ -2.01
COL8A1-204ENST00000462604 A0A096LNT2 108 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 F5H768 121 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 DNAL4O96015 105 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 PRM2P04554 102 aa2.52□□□□□ -2.01
COL8A1-204ENST00000462604 CMC4P56277 68 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms