RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 FER1L6-AS1Q8NA97 138 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 SMIM12Q96EX1 92 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 TPPP3Q9BW30 176 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
HDAC9-220ENST00000461409 F2Z2F3 143 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 M0QY20 66 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 MGPP08493 103 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 GNG4P50150 75 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 GAGE6Q13070 117 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 LINC00269Q8N2A0 174 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 CLRN3Q8NCR9 226 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 OR2D3Q8NGH3 330 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 BIN3Q9NQY0 253 aa5.63□□□□□ -1.51
HDAC9-220ENST00000461409 PDE6DO43924 150 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 OXTP01178 125 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 P01737 135 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 PRSS1P07477 247 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 IGLC6P0CF74 106 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 KRTAP10-4P60372 401 aaPredicted RBP5.62□□□□□ -1.51
HDAC9-220ENST00000461409 CCL20P78556 96 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 MEF2BQ02080 365 aaPredicted RBP5.62□□□□□ -1.51
HDAC9-220ENST00000461409 SERTAD4-AS1Q5TG53 156 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 CLPSL2Q6UWE3 100 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 TMEM243Q9BU79 118 aa5.62□□□□□ -1.51
HDAC9-220ENST00000461409 TRAV8-4A0A0B4J246 113 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 C19orf71A6NCJ1 209 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 IFNA1P01562 189 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 GZMBP10144 247 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 RPL37AP61513 92 aaKnown RBP5.61□□□□□ -1.51
HDAC9-220ENST00000461409 REG3AQ06141 175 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 RASL11AQ6T310 242 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 C9orf163Q8N9P6 203 aa5.61□□□□□ -1.51
HDAC9-220ENST00000461409 A0A1B0GUV1 79 aa5.6□□□□□ -1.51
HDAC9-220ENST00000461409 NKX2-5P52952 324 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-220ENST00000461409 CNBPP62633 177 aaKnown RBP5.6□□□□□ -1.51
HDAC9-220ENST00000461409 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
HDAC9-220ENST00000461409 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
HDAC9-220ENST00000461409 PGLYRP4Q96LB8 373 aa5.6□□□□□ -1.51
HDAC9-220ENST00000461409 DPH3P1Q9H4G8 78 aa5.6□□□□□ -1.51
HDAC9-220ENST00000461409 IGLV10-54A0A075B6I4 117 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-220ENST00000461409 hDV102S1A0JD36 115 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 RAB19A4D1S5 217 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 UBE2L6O14933 153 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 BCL2P10415 239 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 TAGLN2P37802 199 aaKnown RBP5.59□□□□□ -1.51
HDAC9-220ENST00000461409 CTRLP40313 264 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 SULT1A2P50226 295 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 COTL1Q14019 142 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 WDR73Q6P4I2 378 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 LYZL1Q6UWQ5 148 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 C9orf62Q8N4C0 152 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 C20orf203Q8NBC4 194 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 MED9Q9NWA0 146 aa5.59□□□□□ -1.51
HDAC9-220ENST00000461409 TRBV20OR9-2A0A075B6H5 130 aa5.58□□□□□ -1.52
HDAC9-220ENST00000461409 IGHV3-64A0A075B6Q5 118 aa5.58□□□□□ -1.52
HDAC9-220ENST00000461409 NTF3P20783 257 aa5.58□□□□□ -1.52
HDAC9-220ENST00000461409 AMTP48728 403 aa5.58□□□□□ -1.52
HDAC9-220ENST00000461409 SDIM1Q6ZPB5 146 aa5.58□□□□□ -1.52
HDAC9-220ENST00000461409 IGLV4-60A0A075B6I1 120 aa5.57□□□□□ -1.52
HDAC9-220ENST00000461409 TWIST1Q15672 202 aa5.57□□□□□ -1.52
HDAC9-220ENST00000461409 CT83Q5H943 113 aa5.57□□□□□ -1.52
HDAC9-220ENST00000461409 CFAP161Q6P656 301 aa5.57□□□□□ -1.52
HDAC9-220ENST00000461409 SMIM15Q7Z3B0 74 aa5.57□□□□□ -1.52
HDAC9-220ENST00000461409 RNF185Q96GF1 192 aa5.57□□□□□ -1.52
HDAC9-220ENST00000461409 CNFNQ9BYD5 112 aa5.57□□□□□ -1.52
HDAC9-220ENST00000461409 RPP21Q9H633 154 aaKnown RBP5.57□□□□□ -1.52
HDAC9-220ENST00000461409 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
HDAC9-220ENST00000461409 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
HDAC9-220ENST00000461409 TEX261Q6UWH6 196 aa5.56□□□□□ -1.52
HDAC9-220ENST00000461409 SLC51BQ86UW2 128 aa5.56□□□□□ -1.52
HDAC9-220ENST00000461409 DPH3Q96FX2 82 aa5.56□□□□□ -1.52
HDAC9-220ENST00000461409 PANO1I0J062 215 aa5.55□□□□□ -1.52
HDAC9-220ENST00000461409 NCR2O95944 276 aa5.55□□□□□ -1.52
HDAC9-220ENST00000461409 AMMECR1LQ6DCA0 310 aa5.55□□□□□ -1.52
HDAC9-220ENST00000461409 TCTE3Q8IZS6 198 aa5.55□□□□□ -1.52
HDAC9-220ENST00000461409 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
HDAC9-220ENST00000461409 B5MCH6 92 aa5.54□□□□□ -1.52
HDAC9-220ENST00000461409 H7C423 109 aa5.54□□□□□ -1.52
HDAC9-220ENST00000461409 GATD1Q8NB37 220 aa5.54□□□□□ -1.52
HDAC9-220ENST00000461409 SPACA4Q8TDM5 124 aa5.54□□□□□ -1.52
HDAC9-220ENST00000461409 RNASE7Q9H1E1 156 aaKnown RBP5.54□□□□□ -1.52
HDAC9-220ENST00000461409 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 TRAV26-2A0A0B4J265 109 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 GAGE12HA6NDE8 117 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 TMEM250H0YL14 139 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 K7EN84 100 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 APCSP02743 223 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
HDAC9-220ENST00000461409 Q6ZRU5 148 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 OCC1Q8TAD7 63 aa5.53□□□□□ -1.52
HDAC9-220ENST00000461409 A0A087WYN8 130 aa5.52□□□□□ -1.53
HDAC9-220ENST00000461409 A8MWL6 223 aa5.52□□□□□ -1.53
HDAC9-220ENST00000461409 FGF6P10767 208 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms