RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 TP53TG3Q9ULZ0 132 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 V9GYV3 84 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 IGKV3D-20A0A0C4DH25 116 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 ZNF324O75467 553 aaPredicted RBP7.51□□□□□ -1.21
USP39-210ENST00000459775 NCR2O95944 276 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 IGHV4-30-4P0DP06 118 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 C2orf48Q96LS8 159 aa7.51□□□□□ -1.21
USP39-210ENST00000459775 GNRH2O43555 120 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 SPINK4O60575 86 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 P01737 135 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 FRMD6-AS1P0C7T7 363 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 FGF6P10767 208 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 NMUP48645 174 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 ANXA2RQ3ZCQ2 193 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 COX8CQ7Z4L0 72 aa7.5□□□□□ -1.21
USP39-210ENST00000459775 DNAH3Q8TD57 4116 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 OR10AG1Q8NH19 301 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 LENEPQ9Y5L5 61 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 FAM240AA0A1B0GVK7 77 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 CMC4P56277 68 aaPredicted RBP7.49□□□□□ -1.21
USP39-210ENST00000459775 PMCHL1Q16048 86 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 Q6ZWC4 215 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 GTSF1Q8WW33 167 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 RPP21Q9H633 154 aaKnown RBP7.49□□□□□ -1.21
USP39-210ENST00000459775 OSTCQ9NRP0 149 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 PYGO1Q9Y3Y4 419 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 TIMM8BQ9Y5J9 83 aaPredicted RBP7.49□□□□□ -1.21
USP39-210ENST00000459775 SPCS1Q9Y6A9 102 aa7.49□□□□□ -1.21
USP39-210ENST00000459775 TRAV26-2A0A0B4J265 109 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 FAM236AA0A1B0GUQ0 79 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 FAM236BA0A1B0GV22 79 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 PFN2P35080 140 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 MPV17L2Q567V2 206 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 ODF3Q96PU9 254 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 LYRM7Q5U5X0 104 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 DPH3Q96FX2 82 aa7.48□□□□□ -1.21
USP39-210ENST00000459775 TRAV21A0A0B4J279 112 aa7.47□□□□□ -1.21
USP39-210ENST00000459775 Q8N976 141 aa7.47□□□□□ -1.21
USP39-210ENST00000459775 A0A0U1RQV1 116 aa7.46□□□□□ -1.21
USP39-210ENST00000459775 A0A1W2PPM0 123 aa7.46□□□□□ -1.21
USP39-210ENST00000459775 K7EIL1 84 aa7.46□□□□□ -1.21
USP39-210ENST00000459775 CSNK1G2-AS1Q8NCQ2 148 aa7.46□□□□□ -1.21
USP39-210ENST00000459775 NUP35Q8NFH5 326 aa7.46□□□□□ -1.21
USP39-210ENST00000459775 PGLYRP4Q96LB8 373 aa7.46□□□□□ -1.21
USP39-210ENST00000459775 MT-ND6P03923 174 aa7.46□□□□□ -1.22
USP39-210ENST00000459775 FABP2P12104 132 aa7.46□□□□□ -1.22
USP39-210ENST00000459775 DEFB135Q30KP9 77 aa7.46□□□□□ -1.22
USP39-210ENST00000459775 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
USP39-210ENST00000459775 TRBV20-1A0A075B6N2 111 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 H3BVH4 76 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 INSP01308 110 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 FOXA3P55318 350 aaPredicted RBP7.45□□□□□ -1.22
USP39-210ENST00000459775 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
USP39-210ENST00000459775 LINC00526Q96FQ7 95 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 IL36BQ9NZH7 164 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 UQCRQO14949 82 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 GHRHP01286 108 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 P0DMU3 169 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 TMEM258P61165 79 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 DEFB121Q5J5C9 76 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 C3orf22Q8N5N4 141 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 MSRB1Q9NZV6 116 aa7.45□□□□□ -1.22
USP39-210ENST00000459775 IGHV1OR15-1A0A075B7D0 117 aa7.44□□□□□ -1.22
USP39-210ENST00000459775 SMIM27A0A1W2PRY6 76 aa7.44□□□□□ -1.22
USP39-210ENST00000459775 APOC4P55056 127 aa7.44□□□□□ -1.22
USP39-210ENST00000459775 LYZL1Q6UWQ5 148 aa7.44□□□□□ -1.22
USP39-210ENST00000459775 C10orf126Q8N4M7 172 aa7.44□□□□□ -1.22
USP39-210ENST00000459775 H7C1H1 209 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 DEFB4AO15263 64 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 ARMS2P0C7Q2 107 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 RNASE3P12724 160 aaKnown RBP7.43□□□□□ -1.22
USP39-210ENST00000459775 C12orf74Q32Q52 190 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 C9orf153Q5TBE3 101 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
USP39-210ENST00000459775 WWC2-AS2Q96NR7 200 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 GNB1LQ9BYB4 327 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 TRAV9-2A0A087WT02 112 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 A8MWL6 223 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 M0R2P5 195 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 RRN3P1Q2M238 152 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 C18orf32Q8TCD1 76 aa7.43□□□□□ -1.22
USP39-210ENST00000459775 IGHV3-16A0A0C4DH30 117 aa7.42□□□□□ -1.22
USP39-210ENST00000459775 Q6ZRU5 148 aa7.42□□□□□ -1.22
USP39-210ENST00000459775 LAMTOR3Q9UHA4 124 aa7.42□□□□□ -1.22
USP39-210ENST00000459775 TENM3Q9P273 2699 aa7.42□□□□□ -1.22
USP39-210ENST00000459775 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
USP39-210ENST00000459775 ASIPP42127 132 aa7.42□□□□□ -1.22
USP39-210ENST00000459775 SBSPONQ8IVN8 264 aa7.42□□□□□ -1.22
USP39-210ENST00000459775 PMCHL2Q9BQD1 86 aa7.41□□□□□ -1.22
USP39-210ENST00000459775 M0R381 172 aa7.4□□□□□ -1.22
USP39-210ENST00000459775 C11orf72Q8NBR9 251 aa7.4□□□□□ -1.22
USP39-210ENST00000459775 A0A1B0GWB2 263 aa7.4□□□□□ -1.23
USP39-210ENST00000459775 LYRM9A8MSI8 78 aa7.4□□□□□ -1.23
USP39-210ENST00000459775 SMKR1H3BMG3 65 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms