RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 FAM104AQ969W3 186 aa8.34□□□□□ -1.07
RFX3-208ENST00000449234 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
RFX3-208ENST00000449234 FAM110AQ9BQ89 295 aa8.34□□□□□ -1.07
RFX3-208ENST00000449234 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
RFX3-208ENST00000449234 SPTAN1Q13813 2472 aaKnown RBP8.34□□□□□ -1.08
RFX3-208ENST00000449234 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 TRBV30A0A0K0K1B3 111 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 A4D1N5 150 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 SCGB1C2P0DMR2 95 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 SH2D6Q7Z4S9 175 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 TEN1Q86WV5 123 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
RFX3-208ENST00000449234 SPTBN4Q9H254 2564 aa8.32□□□□□ -1.08
RFX3-208ENST00000449234 FHL3Q13643 280 aa8.32□□□□□ -1.08
RFX3-208ENST00000449234 Q6ZSV7 163 aa8.32□□□□□ -1.08
RFX3-208ENST00000449234 ZNF843Q8N446 348 aa8.32□□□□□ -1.08
RFX3-208ENST00000449234 MAPK1IP1LQ8NDC0 245 aa8.32□□□□□ -1.08
RFX3-208ENST00000449234 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
RFX3-208ENST00000449234 Q96MF0 132 aa8.32□□□□□ -1.08
RFX3-208ENST00000449234 TMEM262E9PQX1 116 aa8.31□□□□□ -1.08
RFX3-208ENST00000449234 TCL1BO95988 128 aa8.31□□□□□ -1.08
RFX3-208ENST00000449234 ZFAND6Q6FIF0 208 aa8.31□□□□□ -1.08
RFX3-208ENST00000449234 C18orf65Q6ZTR6 163 aa8.31□□□□□ -1.08
RFX3-208ENST00000449234 STHQ8IWL8 128 aa8.31□□□□□ -1.08
RFX3-208ENST00000449234 C16orf95Q9H693 158 aa8.31□□□□□ -1.08
RFX3-208ENST00000449234 TSSC4Q9Y5U2 329 aaPredicted RBP8.31□□□□□ -1.08
RFX3-208ENST00000449234 DCHS1Q96JQ0 3298 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 H7C423 109 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 PROK1P58294 105 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 HERVK_113P63121 156 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 DAZ2Q13117 558 aaKnown RBP8.3□□□□□ -1.08
RFX3-208ENST00000449234 DEFB136Q30KP8 78 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 Q6ZSN1 163 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
RFX3-208ENST00000449234 LITAFQ99732 161 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 GEMIN7Q9H840 131 aaKnown RBP8.3□□□□□ -1.08
RFX3-208ENST00000449234 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
RFX3-208ENST00000449234 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
RFX3-208ENST00000449234 IGHV3-73A0A0B4J1V6 119 aa8.29□□□□□ -1.08
RFX3-208ENST00000449234 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
RFX3-208ENST00000449234 HTN1P15515 57 aa8.29□□□□□ -1.08
RFX3-208ENST00000449234 RPL36AP83881 106 aaKnown RBP8.29□□□□□ -1.08
RFX3-208ENST00000449234 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
RFX3-208ENST00000449234 ATXN8Q156A1 80 aa8.29□□□□□ -1.08
RFX3-208ENST00000449234 MIAQ16674 131 aa8.29□□□□□ -1.08
RFX3-208ENST00000449234 DGAT2L7PQ6IED9 249 aa8.29□□□□□ -1.08
RFX3-208ENST00000449234 C1orf158Q8N1D5 194 aa8.29□□□□□ -1.08
RFX3-208ENST00000449234 RPL36ALQ969Q0 106 aaKnown RBP8.29□□□□□ -1.08
RFX3-208ENST00000449234 ITPR1Q14643 2758 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 CCL24O00175 119 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 NDUFA1O15239 70 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 COX6CP09669 75 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 AZU1P20160 251 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 ODF3L2Q3SX64 289 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 GTSF1LQ9H1H1 148 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 CR1P17927 2039 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 NCOR2Q9Y618 2525 aa8.28□□□□□ -1.08
RFX3-208ENST00000449234 IGLV5-39A0A0G2JS06 123 aa8.27□□□□□ -1.09
RFX3-208ENST00000449234 KHDC1LQ5JSQ8 128 aa8.27□□□□□ -1.09
RFX3-208ENST00000449234 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
RFX3-208ENST00000449234 PKD1L2Q7Z442 2459 aa8.27□□□□□ -1.09
RFX3-208ENST00000449234 CACNA1AO00555 2505 aa8.27□□□□□ -1.09
RFX3-208ENST00000449234 SLC25A20O43772 301 aa8.26□□□□□ -1.09
RFX3-208ENST00000449234 BBC3Q96PG8 261 aaPredicted RBP8.26□□□□□ -1.09
RFX3-208ENST00000449234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.25□□□□□ -1.09
RFX3-208ENST00000449234 IGKV2-29A2NJV5 120 aaPredicted RBP8.25□□□□□ -1.09
RFX3-208ENST00000449234 DNAJC9-AS1A6NH13 148 aa8.25□□□□□ -1.09
RFX3-208ENST00000449234 K7EQD1 137 aa8.25□□□□□ -1.09
RFX3-208ENST00000449234 HERV-K104P63124 156 aa8.25□□□□□ -1.09
RFX3-208ENST00000449234 Q6ZUT4 128 aa8.25□□□□□ -1.09
RFX3-208ENST00000449234 ZNF418Q8TF45 676 aaPredicted RBP8.25□□□□□ -1.09
RFX3-208ENST00000449234 CARD19Q96LW7 228 aa8.25□□□□□ -1.09
RFX3-208ENST00000449234 OVOL2Q9BRP0 275 aa8.25□□□□□ -1.09
RFX3-208ENST00000449234 DOPEY2Q9Y3R5 2298 aa8.25□□□□□ -1.09
RFX3-208ENST00000449234 CHD8Q9HCK8 2581 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 CSPG4Q6UVK1 2322 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 TRBV10-2A0A0K0K1G8 114 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
RFX3-208ENST00000449234 PRB1P04280 392 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 PRSS2P07478 247 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 LINC01620Q4KN68 170 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 CEMP1Q6PRD7 247 aaPredicted RBP8.24□□□□□ -1.09
RFX3-208ENST00000449234 ANKRD29Q8N6D5 301 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 C16orf74Q96GX8 76 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 XCL2Q9UBD3 114 aa8.24□□□□□ -1.09
RFX3-208ENST00000449234 IGHV3-64A0A075B6Q5 118 aa8.23□□□□□ -1.09
RFX3-208ENST00000449234 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
RFX3-208ENST00000449234 TRGV1A0A0A0MS02 117 aa8.23□□□□□ -1.09
RFX3-208ENST00000449234 TRBV6-4A0A1B0GX49 114 aa8.23□□□□□ -1.09
RFX3-208ENST00000449234 H3BT86 120 aa8.23□□□□□ -1.09
RFX3-208ENST00000449234 RNASE1P07998 156 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms