RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 NFE4Q86UQ8 179 aa7.65□□□□□ -1.19
SCN10A-201ENST00000449082 CHCHD10Q8WYQ3 142 aaPredicted RBP7.65□□□□□ -1.19
SCN10A-201ENST00000449082 PSMB8P28062 276 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 NCOA6Q14686 2063 aaPredicted RBP7.64□□□□□ -1.19
SCN10A-201ENST00000449082 TMEM256-PLSCR3K7ERE1 68 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 TNCP24821 2201 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 NUP210LQ5VU65 1888 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 FXYD2P54710 66 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 RBM3P98179 157 aaKnown RBP7.64□□□□□ -1.19
SCN10A-201ENST00000449082 LINC01006Q8NI28 216 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 CHKB-CPT1BH3BT56 60 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 MED12LQ86YW9 2145 aa7.64□□□□□ -1.19
SCN10A-201ENST00000449082 A0A1B0GX51 115 aa7.63□□□□□ -1.19
SCN10A-201ENST00000449082 CRIP3Q6Q6R5 217 aa7.63□□□□□ -1.19
SCN10A-201ENST00000449082 C10orf99Q6UWK7 81 aa7.63□□□□□ -1.19
SCN10A-201ENST00000449082 TTTY13Q9BZ97 58 aa7.63□□□□□ -1.19
SCN10A-201ENST00000449082 A0A1B0GXF2 115 aa7.63□□□□□ -1.19
SCN10A-201ENST00000449082 ANKHD1Q8IWZ3 2542 aaKnown RBP7.63□□□□□ -1.19
SCN10A-201ENST00000449082 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 LINC00322Q6ZN03 302 aaPredicted RBP7.62□□□□□ -1.19
SCN10A-201ENST00000449082 NEXN-AS1Q8NBZ9 246 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 LINC00467Q9BRT7 94 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 MIAQ16674 131 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 CUL9Q8IWT3 2517 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 FRMD6-AS1P0C7T7 363 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 CFAP126Q5VTH2 177 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 CDPF1Q6NVV7 123 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
SCN10A-201ENST00000449082 PDE6GP18545 87 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 TMEM258P61165 79 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 MLST8Q9BVC4 326 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 TNRC6BQ9UPQ9 1833 aaKnown RBP7.61□□□□□ -1.19
SCN10A-201ENST00000449082 KIR2DL5BQ8NHK3 375 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 Q8N6K4 173 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 CLEC2BQ92478 149 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 TDRG1Q3Y452 100 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
SCN10A-201ENST00000449082 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
SCN10A-201ENST00000449082 TEN1Q86WV5 123 aa7.6□□□□□ -1.19
SCN10A-201ENST00000449082 SPG11Q96JI7 2443 aa7.6□□□□□ -1.19
SCN10A-201ENST00000449082 H3BT86 120 aa7.6□□□□□ -1.19
SCN10A-201ENST00000449082 H0Y9J4 135 aa7.6□□□□□ -1.19
SCN10A-201ENST00000449082 GDF5OSQ5U4N7 250 aa7.6□□□□□ -1.19
SCN10A-201ENST00000449082 A0A087WZ39 114 aa7.59□□□□□ -1.19
SCN10A-201ENST00000449082 A0A0J9YXY3 114 aa7.59□□□□□ -1.19
SCN10A-201ENST00000449082 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.19
SCN10A-201ENST00000449082 FAM19A1Q7Z5A9 133 aa7.59□□□□□ -1.19
SCN10A-201ENST00000449082 SPATA12Q7Z6I5 190 aa7.58□□□□□ -1.2
SCN10A-201ENST00000449082 MUC22E2RYF6 1773 aaPredicted RBP7.58□□□□□ -1.2
SCN10A-201ENST00000449082 NOTCH2Q04721 2471 aa7.58□□□□□ -1.2
SCN10A-201ENST00000449082 HIST2H2BDQ6DRA6 164 aa7.58□□□□□ -1.2
SCN10A-201ENST00000449082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.58□□□□□ -1.2
SCN10A-201ENST00000449082 M0QY20 66 aa7.58□□□□□ -1.2
SCN10A-201ENST00000449082 IGLV1-40P01703 118 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 BBC3Q96PG8 261 aaPredicted RBP7.57□□□□□ -1.2
SCN10A-201ENST00000449082 ARHGAP21Q5T5U3 1957 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 IGLV4-3A0A075B6K6 122 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 CDKN2A-AS1Q9UH64 79 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 ATOX1O00244 68 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 LRCOL1A6NCL2 159 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 WFDC9Q8NEX5 89 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 C7orf33Q8WU49 177 aa7.57□□□□□ -1.2
SCN10A-201ENST00000449082 IBA57-AS1B1ANH7 110 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 PCNX3Q9H6A9 2034 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 C18orf65Q6ZTR6 163 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.56□□□□□ -1.2
SCN10A-201ENST00000449082 NDUFA7O95182 113 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 MBD6Q96DN6 1003 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 C14orf132Q9NPU4 83 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 CSPG4Q6UVK1 2322 aa7.56□□□□□ -1.2
SCN10A-201ENST00000449082 CRIP1P50238 77 aa7.55□□□□□ -1.2
SCN10A-201ENST00000449082 KPRPQ5T749 579 aaPredicted RBP7.55□□□□□ -1.2
SCN10A-201ENST00000449082 TMEM223A0PJW6 202 aa7.55□□□□□ -1.2
SCN10A-201ENST00000449082 SMIM20Q8N5G0 67 aa7.55□□□□□ -1.2
SCN10A-201ENST00000449082 WFDC2Q14508 124 aa7.55□□□□□ -1.2
SCN10A-201ENST00000449082 CDSNQ15517 529 aa7.55□□□□□ -1.2
SCN10A-201ENST00000449082 ZNF22P17026 224 aaPredicted RBP7.55□□□□□ -1.2
SCN10A-201ENST00000449082 PROK1P58294 105 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 FAM19A5Q7Z5A7 132 aaPredicted RBP7.54□□□□□ -1.2
SCN10A-201ENST00000449082 PTPN13Q12923 2485 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 C10orf142B7Z368 130 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 Q6ZS46 218 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 TAX1BP3O14907 124 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 LELP1Q5T871 98 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 KIAA1549Q9HCM3 1950 aa7.54□□□□□ -1.2
SCN10A-201ENST00000449082 IGLV2-18A0A075B6J9 118 aa7.53□□□□□ -1.2
SCN10A-201ENST00000449082 WFDC10AQ9H1F0 79 aa7.53□□□□□ -1.2
SCN10A-201ENST00000449082 FOXI1Q12951 378 aa7.53□□□□□ -1.2
SCN10A-201ENST00000449082 TRBV6-5A0A0K0K1A5 114 aa7.53□□□□□ -1.2
SCN10A-201ENST00000449082 RBX1P62877 108 aa7.53□□□□□ -1.2
SCN10A-201ENST00000449082 Q8N976 141 aa7.53□□□□□ -1.2
SCN10A-201ENST00000449082 SPANXB1Q9NS25 103 aaPredicted RBP7.53□□□□□ -1.2
SCN10A-201ENST00000449082 C5orf47Q569G3 176 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms