RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
PTPN3-204ENST00000446349 P0C879 139 aa6.45□□□□□ -1.38
PTPN3-204ENST00000446349 A0A1B0GX51 115 aa6.45□□□□□ -1.38
PTPN3-204ENST00000446349 ADAMTS20P59510 1910 aa6.45□□□□□ -1.38
PTPN3-204ENST00000446349 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
PTPN3-204ENST00000446349 MSMPQ1L6U9 139 aa6.45□□□□□ -1.38
PTPN3-204ENST00000446349 A0A0J9YXV3 536 aa6.45□□□□□ -1.38
PTPN3-204ENST00000446349 C19orf71A6NCJ1 209 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 ZNF702PQ9H963 129 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 MYO18BQ8IUG5 2567 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 A0A0J9YXY3 114 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 A0A0B4J2C4 111 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 PRAC2D3DTV9 90 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 TRBV12-3P01733 135 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 LINC01006Q8NI28 216 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 CHCHD7Q9BUK0 85 aa6.44□□□□□ -1.38
PTPN3-204ENST00000446349 TET2Q6N021 2002 aaPredicted RBP6.44□□□□□ -1.38
PTPN3-204ENST00000446349 H3BT86 120 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 SEC61GP60059 68 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 NHLRC4P0CG21 123 aaPredicted RBP6.43□□□□□ -1.38
PTPN3-204ENST00000446349 LELP1Q5T871 98 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 SS18L2Q9UHA2 77 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 IBA57-AS1B1ANH7 110 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 BRI3O95415 125 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 COL4A3Q01955 1670 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 TRBV6-8A0A0A6YYG3 113 aa6.43□□□□□ -1.38
PTPN3-204ENST00000446349 NAA38Q9BRA0 125 aaKnown RBP6.43□□□□□ -1.38
PTPN3-204ENST00000446349 F8WDY8 70 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 CLUHP3Q96NS8 147 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 Q8N6K4 173 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 C16orf95Q9H693 158 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 RS1O15537 224 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 Q8N976 141 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 IGKV1D-37A0A075B6S9 117 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 MUSTN1Q8IVN3 82 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 GTSF1Q8WW33 167 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 K7EP13 123 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 LINC00482Q8N8I6 264 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 ARHGAP32A7KAX9 2087 aa6.42□□□□□ -1.38
PTPN3-204ENST00000446349 NAV2Q8IVL1 2488 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 MIR7-3HGQ8N6C7 128 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 ZFAND3Q9H8U3 227 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-204ENST00000446349 E7EUB6 86 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 ATOX1O00244 68 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 ESM1Q9NQ30 184 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 ABCA2Q9BZC7 2435 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 HIVEP3Q5T1R4 2406 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 IGLV1-40P01703 118 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 COX17Q14061 63 aa6.41□□□□□ -1.38
PTPN3-204ENST00000446349 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
PTPN3-204ENST00000446349 UBE2D1P51668 147 aa6.4□□□□□ -1.38
PTPN3-204ENST00000446349 Q6ZTI0 123 aa6.4□□□□□ -1.38
PTPN3-204ENST00000446349 PYGO1Q9Y3Y4 419 aa6.4□□□□□ -1.38
PTPN3-204ENST00000446349 GATA1P15976 413 aaPredicted RBP6.4□□□□□ -1.38
PTPN3-204ENST00000446349 DEFB4AO15263 64 aa6.4□□□□□ -1.38
PTPN3-204ENST00000446349 PRRC2AP48634 2157 aaKnown RBP6.4□□□□□ -1.38
PTPN3-204ENST00000446349 PROP1O75360 226 aa6.4□□□□□ -1.38
PTPN3-204ENST00000446349 C10orf142B7Z368 130 aa6.4□□□□□ -1.39
PTPN3-204ENST00000446349 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.39
PTPN3-204ENST00000446349 CCDC168Q8NDH2 2452 aa6.4□□□□□ -1.39
PTPN3-204ENST00000446349 TRBV6-5A0A0K0K1A5 114 aa6.4□□□□□ -1.39
PTPN3-204ENST00000446349 EIF4EBP1Q13541 118 aaPredicted RBP6.4□□□□□ -1.39
PTPN3-204ENST00000446349 SYCNQ0VAF6 134 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 RPL39P62891 51 aaKnown RBP6.39□□□□□ -1.39
PTPN3-204ENST00000446349 IGLV4-69A0A075B6H9 119 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 HIST2H2BDQ6DRA6 164 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 DSCAML1Q8TD84 2053 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 LOC107984640A0A0U1RRK4 108 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 NCR3O14931 201 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 CRIP2P52943 208 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-204ENST00000446349 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 FAM110AQ9BQ89 295 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 IGLC6P0CF74 106 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 KPRPQ5T749 579 aaPredicted RBP6.39□□□□□ -1.39
PTPN3-204ENST00000446349 C11orf1Q9H5F2 150 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 MSRB1Q9NZV6 116 aa6.39□□□□□ -1.39
PTPN3-204ENST00000446349 ODF1Q14990 250 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 A0A087WZ39 114 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 ETDBQ3ZM63 59 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 Q6ZUT4 128 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 TIMM17BO60830 172 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 NTN5Q8WTR8 489 aaPredicted RBP6.38□□□□□ -1.39
PTPN3-204ENST00000446349 IGHV4-4A0A075B6R2 117 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 H3BMG7 143 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 IGHV4-28A0A0C4DH34 117 aa6.38□□□□□ -1.39
PTPN3-204ENST00000446349 TRBV10-2A0A0K0K1G8 114 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 MRPS36P82909 103 aaKnown RBP6.37□□□□□ -1.39
PTPN3-204ENST00000446349 UPK3BQ9BT76 320 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 J3KT08 172 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-204ENST00000446349 H0Y9J4 135 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 ATP5EP2Q5VTU8 51 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 TEN1Q86WV5 123 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 PCP2Q8IVA1 136 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 NEXN-AS1Q8NBZ9 246 aa6.37□□□□□ -1.39
PTPN3-204ENST00000446349 LRRK2Q5S007 2527 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms