RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 TRAV12-3A0A0B4J271 114 aa5.7□□□□□ -1.5
LMO3-208ENST00000441439 ADARB2-AS1A8MUL3 147 aa5.7□□□□□ -1.5
LMO3-208ENST00000441439 BCE1O60756 84 aa5.7□□□□□ -1.5
LMO3-208ENST00000441439 TRBV12-3P01733 135 aa5.7□□□□□ -1.5
LMO3-208ENST00000441439 MALP21145 153 aa5.7□□□□□ -1.5
LMO3-208ENST00000441439 DEFB1P60022 68 aa5.7□□□□□ -1.5
LMO3-208ENST00000441439 HIST2H2BCQ6DN03 193 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 HIST2H2BDQ6DRA6 164 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 DUX5Q96PT3 197 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 SOSTDC1Q6X4U4 206 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 Q8N2B8 174 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 TRAV13-2A0A0B4J235 113 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 K7EQG2 157 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 FAM74A4Q5TZK3 123 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 ATP5EP2Q5VTU8 51 aa5.69□□□□□ -1.5
LMO3-208ENST00000441439 KLK5Q9Y337 293 aaPredicted RBP5.69□□□□□ -1.5
LMO3-208ENST00000441439 TMEM89A2RUT3 159 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 LYPD5Q6UWN5 251 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 ICE1Q9Y2F5 2266 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 PRIMA1Q86XR5 153 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 KALRNO60229 2985 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 UCNP55089 124 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 Q5XG85 94 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 C3orf56Q8N813 242 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 MRAPQ8TCY5 172 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 FAM218AQ96MZ4 157 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 CDKN2A-AS1Q9UH64 79 aa5.68□□□□□ -1.5
LMO3-208ENST00000441439 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
LMO3-208ENST00000441439 WDFY4Q6ZS81 3184 aa5.67□□□□□ -1.5
LMO3-208ENST00000441439 CEP290O15078 2479 aa5.67□□□□□ -1.5
LMO3-208ENST00000441439 TRBV10-3A0A0K0K1G6 114 aa5.67□□□□□ -1.5
LMO3-208ENST00000441439 SMIM1B2RUZ4 78 aa5.67□□□□□ -1.5
LMO3-208ENST00000441439 NDUFC2O95298 119 aa5.67□□□□□ -1.5
LMO3-208ENST00000441439 H0YGX0 51 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 IGHV3-53P01767 116 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 NACAE9PAV3 2078 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 F5H768 121 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 LMO4P61968 165 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.66□□□□□ -1.5
LMO3-208ENST00000441439 SMG1Q96Q15 3661 aaKnown RBP5.66□□□□□ -1.5
LMO3-208ENST00000441439 A6NDX4 124 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 LINC00242Q5T6M2 205 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 LINC01560Q8TB33 94 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
LMO3-208ENST00000441439 A8MZ25 164 aa5.65□□□□□ -1.5
LMO3-208ENST00000441439 SNRPD3P62318 126 aaKnown RBP5.65□□□□□ -1.5
LMO3-208ENST00000441439 Q9H8V8 135 aa5.65□□□□□ -1.5
LMO3-208ENST00000441439 IGHV3OR16-12A0A075B7B8 117 aa5.65□□□□□ -1.5
LMO3-208ENST00000441439 OXTP01178 125 aa5.65□□□□□ -1.5
LMO3-208ENST00000441439 PSMB8P28062 276 aa5.65□□□□□ -1.5
LMO3-208ENST00000441439 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
LMO3-208ENST00000441439 S100A7L2Q5SY68 101 aa5.65□□□□□ -1.51
LMO3-208ENST00000441439 RS1O15537 224 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 LY6HO94772 140 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 LY6G6DO95868 133 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 DEFB104AQ8WTQ1 72 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 PIEZO2Q9H5I5 2752 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 ZNF292O60281 2723 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 DNAL4O96015 105 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 NPC2P61916 151 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 COX6A2Q02221 97 aa5.64□□□□□ -1.51
LMO3-208ENST00000441439 USP17L23D6RBM5 183 aa5.63□□□□□ -1.51
LMO3-208ENST00000441439 DMXL2Q8TDJ6 3036 aa5.63□□□□□ -1.51
LMO3-208ENST00000441439 URB1O60287 2271 aaKnown RBP5.63□□□□□ -1.51
LMO3-208ENST00000441439 RBMY1A1P0DJD3 496 aaKnown RBP5.62□□□□□ -1.51
LMO3-208ENST00000441439 RBMY1CP0DJD4 496 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 ADORA2A-AS1P86434 159 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 RBMY1FQ15415 496 aaKnown RBP5.62□□□□□ -1.51
LMO3-208ENST00000441439 KIR2DL5BQ8NHK3 375 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 LINC00846Q9NV44 126 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 IGKV2-28A0A075B6P5 120 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 IGKV2D-28P01615 120 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 CCKP06307 115 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 C11orf72Q8NBR9 251 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 IL17DQ8TAD2 202 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 UBTD1Q9HAC8 227 aa5.62□□□□□ -1.51
LMO3-208ENST00000441439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
LMO3-208ENST00000441439 TRAV12-2A0A075B6T6 113 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
LMO3-208ENST00000441439 Q6ZSN1 163 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 TRAV13-1A0A0B4J241 112 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 A0A1W2PRX2 142 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 CRPP02741 224 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 SPINK13Q1W4C9 94 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 GRNP28799 593 aaKnown RBP5.61□□□□□ -1.51
LMO3-208ENST00000441439 SS18Q15532 418 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 LINC00337Q8N6G1 96 aa5.61□□□□□ -1.51
LMO3-208ENST00000441439 DCHS1Q96JQ0 3298 aa5.6□□□□□ -1.51
LMO3-208ENST00000441439 TRBV10-1A0A0K0K1A3 114 aa5.6□□□□□ -1.51
LMO3-208ENST00000441439 PROK1P58294 105 aa5.6□□□□□ -1.51
LMO3-208ENST00000441439 RNASE13Q5GAN3 156 aaKnown RBP5.6□□□□□ -1.51
LMO3-208ENST00000441439 BDP1A6H8Y1 2624 aa5.6□□□□□ -1.51
LMO3-208ENST00000441439 SYNJ2BPP57105 145 aa5.6□□□□□ -1.51
LMO3-208ENST00000441439 EDN2P20800 178 aa5.6□□□□□ -1.51
LMO3-208ENST00000441439 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
LMO3-208ENST00000441439 A0A087WYN8 130 aa5.59□□□□□ -1.51
LMO3-208ENST00000441439 JMJD7-PLA2G4BH0Y9G9 81 aa5.59□□□□□ -1.51
LMO3-208ENST00000441439 SMIM11BQ8TCY0 68 aa5.59□□□□□ -1.51
LMO3-208ENST00000441439 IGHV3-11P01762 117 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms