RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 CLEC2BQ92478 149 aa9.64□□□□□ -0.87
BRPF3-203ENST00000441123 TIMM17BO60830 172 aa9.64□□□□□ -0.87
BRPF3-203ENST00000441123 PDE6GP18545 87 aa9.64□□□□□ -0.87
BRPF3-203ENST00000441123 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
BRPF3-203ENST00000441123 PSMG3-AS1Q96PY0 264 aa9.64□□□□□ -0.87
BRPF3-203ENST00000441123 TMEM256-PLSCR3K7ERE1 68 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 PIK3CD-AS1Q5SR53 167 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 C2orf91Q6ZV80 131 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 COX8CQ7Z4L0 72 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 EXPH5Q8NEV8 1989 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 NOTCH2Q04721 2471 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 CFAP126Q5VTH2 177 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 HIST2H2BDQ6DRA6 164 aa9.63□□□□□ -0.87
BRPF3-203ENST00000441123 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
BRPF3-203ENST00000441123 SMIM20Q8N5G0 67 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 ESM1Q9NQ30 184 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 TRBV30A0A0K0K1B3 111 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 LYRM9A8MSI8 78 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 CRIP2P52943 208 aaPredicted RBP9.62□□□□□ -0.87
BRPF3-203ENST00000441123 LINC00310P59036 64 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 MAPKAPK5-AS1Q8N8E1 139 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 DEFB105AQ8NG35 78 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 LINC00467Q9BRT7 94 aa9.62□□□□□ -0.87
BRPF3-203ENST00000441123 IGLV10-54A0A075B6I4 117 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
BRPF3-203ENST00000441123 ETDCA0A1B0GVM5 59 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 LECT2O14960 151 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 SPAG11BQ08648 103 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 hADV29S1A0JD25 119 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 F8W735 103 aaPredicted RBP9.61□□□□□ -0.87
BRPF3-203ENST00000441123 BRI3O95415 125 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
BRPF3-203ENST00000441123 LINC00643Q86TS7 51 aa9.61□□□□□ -0.87
BRPF3-203ENST00000441123 Q8N976 141 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 KIAA1549Q9HCM3 1950 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 B5MCH6 92 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 TTC28Q96AY4 2481 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 Q6ZTI0 123 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 DIRC1Q969H9 104 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 C11orf21Q9P2W6 132 aa9.6□□□□□ -0.87
BRPF3-203ENST00000441123 FAM236AA0A1B0GUQ0 79 aa9.59□□□□□ -0.87
BRPF3-203ENST00000441123 FAM236BA0A1B0GV22 79 aa9.59□□□□□ -0.87
BRPF3-203ENST00000441123 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
BRPF3-203ENST00000441123 NDUFS5O43920 106 aa9.59□□□□□ -0.87
BRPF3-203ENST00000441123 TSHBP01222 138 aa9.59□□□□□ -0.87
BRPF3-203ENST00000441123 ZNF702PQ9H963 129 aa9.59□□□□□ -0.87
BRPF3-203ENST00000441123 IBA57-AS1B1ANH7 110 aa9.58□□□□□ -0.88
BRPF3-203ENST00000441123 NCR3O14931 201 aa9.58□□□□□ -0.88
BRPF3-203ENST00000441123 MRPS36P82909 103 aaKnown RBP9.58□□□□□ -0.88
BRPF3-203ENST00000441123 DEFB135Q30KP9 77 aa9.58□□□□□ -0.88
BRPF3-203ENST00000441123 PRR9Q5T870 116 aa9.58□□□□□ -0.88
BRPF3-203ENST00000441123 PLCE1Q9P212 2302 aa9.57□□□□□ -0.88
BRPF3-203ENST00000441123 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
BRPF3-203ENST00000441123 ZNF580Q9UK33 172 aa9.57□□□□□ -0.88
BRPF3-203ENST00000441123 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
BRPF3-203ENST00000441123 LINC00308Q8TCZ7 52 aa9.57□□□□□ -0.88
BRPF3-203ENST00000441123 RBM3P98179 157 aaKnown RBP9.57□□□□□ -0.88
BRPF3-203ENST00000441123 PTH2Q96A98 100 aa9.57□□□□□ -0.88
BRPF3-203ENST00000441123 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
BRPF3-203ENST00000441123 URB1-AS1Q96HZ7 61 aa9.56□□□□□ -0.88
BRPF3-203ENST00000441123 HCFC1P51610 2035 aa9.56□□□□□ -0.88
BRPF3-203ENST00000441123 KLK5Q9Y337 293 aaPredicted RBP9.56□□□□□ -0.88
BRPF3-203ENST00000441123 DEFB4AO15263 64 aa9.56□□□□□ -0.88
BRPF3-203ENST00000441123 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
BRPF3-203ENST00000441123 ACACBO00763 2458 aa9.56□□□□□ -0.88
BRPF3-203ENST00000441123 COL4A2P08572 1712 aa9.56□□□□□ -0.88
BRPF3-203ENST00000441123 A0A1B0GX51 115 aa9.55□□□□□ -0.88
BRPF3-203ENST00000441123 TMEM258P61165 79 aa9.55□□□□□ -0.88
BRPF3-203ENST00000441123 SS18L2Q9UHA2 77 aa9.55□□□□□ -0.88
BRPF3-203ENST00000441123 Q6ZSV7 163 aa9.55□□□□□ -0.88
BRPF3-203ENST00000441123 MRGPRG-AS1Q2M3A8 158 aa9.54□□□□□ -0.88
BRPF3-203ENST00000441123 IGKV3D-7A0A0C4DH55 119 aa9.54□□□□□ -0.88
BRPF3-203ENST00000441123 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 CRYGDP07320 174 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 COX7BP24311 80 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 RBX1P62877 108 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 REG3AQ06141 175 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 TRIAP1O43715 76 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 NREPQ16612 68 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 KLK12Q9UKR0 248 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 UBE2D4Q9Y2X8 147 aa9.53□□□□□ -0.88
BRPF3-203ENST00000441123 HIVEP2P31629 2446 aa9.52□□□□□ -0.89
BRPF3-203ENST00000441123 IGIPA6NJ69 53 aa9.51□□□□□ -0.89
BRPF3-203ENST00000441123 J3KT08 172 aa9.51□□□□□ -0.89
BRPF3-203ENST00000441123 UBE2AP49459 152 aa9.5□□□□□ -0.89
BRPF3-203ENST00000441123 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
BRPF3-203ENST00000441123 MIFP14174 115 aa9.5□□□□□ -0.89
BRPF3-203ENST00000441123 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
BRPF3-203ENST00000441123 TEX49A0A1B0GTD5 131 aa9.5□□□□□ -0.89
BRPF3-203ENST00000441123 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
BRPF3-203ENST00000441123 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
BRPF3-203ENST00000441123 SPG11Q96JI7 2443 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms