RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 IGFBP7Q16270 282 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 CYP2G1PQ6ZSU1 146 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 TNRC6CQ9HCJ0 1690 aaKnown RBP2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 RGPD3A6NKT7 1758 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 AGRNO00468 2067 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 NUP214P35658 2090 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 MUC4Q99102 2169 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 ZNF318Q5VUA4 2279 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 CCDC88CQ9P219 2028 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 LY75O60449 1722 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 DUOX1Q9NRD9 1551 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 IGLV3-16A0A075B6K0 115 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 TRBV7-1A0A0A6YYK4 115 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 TRAV12-1A0A0B4J245 112 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 KANTRA0A1W2PQU2 76 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 C7orf77A4D0Y5 90 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 CXCL8P10145 99 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 MOBPQ13875 183 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 LINC00483Q53H64 154 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 CFAP126Q5VTH2 177 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 LHFPL6Q9Y693 200 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 AFDNP55196 1824 aaKnown RBP2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 CACNA1GO43497 2377 aa2.16□□□□□ -2.06
HMGB1P12-201ENST00000438594 COL4A1P02462 1669 aa2.15□□□□□ -2.06
HMGB1P12-201ENST00000438594 SLX4Q8IY92 1834 aa2.15□□□□□ -2.06
HMGB1P12-201ENST00000438594 QSER1Q2KHR3 1735 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 TNS1Q9HBL0 1735 aaKnown RBP2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 NRXN2Q9P2S2 1712 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 TMSB15BA0A087X1C1 80 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 A0A0G2JND7 137 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 KRTAP10-1P60331 282 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 SNRPFP62306 86 aaKnown RBP2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 PMCHL1Q16048 86 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 ZNF833PQ6ZTB9 187 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 BPESC1Q9GZL8 116 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 TP53TG3Q9ULZ0 132 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 ARHGAP21Q5T5U3 1957 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 PCNX2A6NKB5 2137 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 MUC22E2RYF6 1773 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 DLEC1Q9Y238 1755 aa2.15□□□□□ -2.07
HMGB1P12-201ENST00000438594 MYO18AQ92614 2054 aaKnown RBP2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 PLXNA2O75051 1894 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 ABCA7Q8IZY2 2146 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 SCN3AQ9NY46 2000 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 A0A087WWC5 75 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 A0A087WXM4 84 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 A0A1W2PNM2 257 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 A8MU10 97 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 F2Z2F3 143 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 RTL8CO15255 209 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 UBE2D3P61077 147 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 UBE2D2P62837 147 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 KLKP1Q107X0 134 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 ZNF79Q15937 498 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 VMO1Q7Z5L0 202 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 FAM223AQ8IWN6 122 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 CLECL1Q8IZS7 167 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 IFI27L1Q96BM0 104 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 FAM167A-AS1Q96KT0 104 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 LINC00167Q96N53 147 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 MANBALQ9NQG1 85 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 C22orf24Q9Y442 160 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 R4GN34 69 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 PTPRDP23468 1912 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 DIDO1Q9BTC0 2240 aaKnown RBP2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 EML5Q05BV3 1969 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 CPAMD8Q8IZJ3 1885 aa2.14□□□□□ -2.07
HMGB1P12-201ENST00000438594 LAMB1P07942 1786 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 TRAV22A0A0B4J277 110 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 TEX49A0A1B0GTD5 131 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 C2orf70A6NJV1 201 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 BCE1O60756 84 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 ERHP84090 104 aaKnown RBP2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 NDPQ00604 133 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 Q5VV11 94 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 LINC00643Q86TS7 51 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 TIMM21Q9BVV7 248 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 PRO1854Q9UHT4 67 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 NACAE9PAV3 2078 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 DOCK9Q9BZ29 2069 aa2.13□□□□□ -2.07
HMGB1P12-201ENST00000438594 COL4A6Q14031 1691 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 COL27A1Q8IZC6 1860 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 TRBV7-3A0A075B6L6 115 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 TRAV12-3A0A0B4J271 114 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 TMEM30CPA0ZSE6 113 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 UMAD1C9J7I0 102 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 ACYP1P07311 99 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 ELOBQ15370 118 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 CSAG1Q6PB30 78 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 SPINT4Q6UDR6 99 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 C2orf82Q6UX34 121 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 Q8N6K4 173 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 HIGD2AQ9BW72 106 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 SCRT1Q9BWW7 348 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 MYH4Q9Y623 1939 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 LTBP2Q14767 1821 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 PATJQ8NI35 1801 aa2.12□□□□□ -2.07
HMGB1P12-201ENST00000438594 UBR3Q6ZT12 1888 aa2.11□□□□□ -2.07
HMGB1P12-201ENST00000438594 TRPM7Q96QT4 1865 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms