RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 IGHV4-31P0DP07 118 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 WFDC10BQ8IUB3 73 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 CSPG4Q6UVK1 2322 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 NOTCH2Q04721 2471 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 Q6YL49 198 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 TEN1Q86WV5 123 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 IGLV2-18A0A075B6J9 118 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 M0R2N4 97 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 SIRPDQ9H106 197 aa8.53□□□□□ -1.04
SCN4A-201ENST00000435607 C11orf53Q8IXP5 236 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 K7EN84 100 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 MDFICQ9P1T7 246 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 ARHGAP21Q5T5U3 1957 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 KIAA1549Q9HCM3 1950 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 COL4A1P02462 1669 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 B5MCH6 92 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 HIST2H2BDQ6DRA6 164 aa8.52□□□□□ -1.05
SCN4A-201ENST00000435607 DHRS4-AS1Q9P1J3 65 aa8.51□□□□□ -1.05
SCN4A-201ENST00000435607 MRPL55Q7Z7F7 128 aaKnown RBP8.51□□□□□ -1.05
SCN4A-201ENST00000435607 LY6LH3BQJ8 138 aa8.51□□□□□ -1.05
SCN4A-201ENST00000435607 Q8N9L7 120 aa8.51□□□□□ -1.05
SCN4A-201ENST00000435607 C2orf16Q68DN1 1984 aa8.51□□□□□ -1.05
SCN4A-201ENST00000435607 FAM236DA0A1B0GTK5 79 aa8.51□□□□□ -1.05
SCN4A-201ENST00000435607 FAM236CP0DP71 79 aa8.51□□□□□ -1.05
SCN4A-201ENST00000435607 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
SCN4A-201ENST00000435607 Q8N976 141 aa8.5□□□□□ -1.05
SCN4A-201ENST00000435607 SPANXB1Q9NS25 103 aaPredicted RBP8.5□□□□□ -1.05
SCN4A-201ENST00000435607 C20orf203Q8NBC4 194 aa8.5□□□□□ -1.05
SCN4A-201ENST00000435607 Q6ZUT4 128 aa8.5□□□□□ -1.05
SCN4A-201ENST00000435607 Q6ZVQ6 151 aa8.5□□□□□ -1.05
SCN4A-201ENST00000435607 CTRLP40313 264 aa8.5□□□□□ -1.05
SCN4A-201ENST00000435607 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
SCN4A-201ENST00000435607 RITA1Q96K30 269 aa8.5□□□□□ -1.05
SCN4A-201ENST00000435607 ASPHD1Q5U4P2 390 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 CLEC2BQ92478 149 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 ATP5EP2Q5VTU8 51 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 ABCA2Q9BZC7 2435 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 IGLV3-1P01715 115 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 Q6ZTI0 123 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
SCN4A-201ENST00000435607 C1orf147Q96MC9 270 aaPredicted RBP8.48□□□□□ -1.05
SCN4A-201ENST00000435607 LY6G6DO95868 133 aa8.48□□□□□ -1.05
SCN4A-201ENST00000435607 ADCYAP1P18509 176 aa8.48□□□□□ -1.05
SCN4A-201ENST00000435607 Q8N7P7 452 aa8.48□□□□□ -1.05
SCN4A-201ENST00000435607 TRAV23DV6A0A075B6W5 121 aa8.48□□□□□ -1.05
SCN4A-201ENST00000435607 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
SCN4A-201ENST00000435607 IBA57-AS1B1ANH7 110 aa8.48□□□□□ -1.05
SCN4A-201ENST00000435607 MYO18BQ8IUG5 2567 aa8.48□□□□□ -1.05
SCN4A-201ENST00000435607 IGLV4-69A0A075B6H9 119 aa8.47□□□□□ -1.05
SCN4A-201ENST00000435607 CACNA1AO00555 2505 aa8.47□□□□□ -1.05
SCN4A-201ENST00000435607 MSRB1Q9NZV6 116 aa8.47□□□□□ -1.05
SCN4A-201ENST00000435607 RSPO1Q2MKA7 263 aaPredicted RBP8.47□□□□□ -1.05
SCN4A-201ENST00000435607 PRAC2D3DTV9 90 aa8.47□□□□□ -1.05
SCN4A-201ENST00000435607 IGF1P05019 195 aa8.47□□□□□ -1.05
SCN4A-201ENST00000435607 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
SCN4A-201ENST00000435607 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.05
SCN4A-201ENST00000435607 UNQ9165/PRO28630Q6UXU0 137 aa8.46□□□□□ -1.05
SCN4A-201ENST00000435607 TDRG1Q3Y452 100 aa8.46□□□□□ -1.05
SCN4A-201ENST00000435607 KPRPQ5T749 579 aaPredicted RBP8.46□□□□□ -1.05
SCN4A-201ENST00000435607 SPRNQ5BIV9 151 aa8.46□□□□□ -1.06
SCN4A-201ENST00000435607 TRBV6-8A0A0A6YYG3 113 aa8.46□□□□□ -1.06
SCN4A-201ENST00000435607 IGLV1-47P01700 117 aa8.46□□□□□ -1.06
SCN4A-201ENST00000435607 C1orf158Q8N1D5 194 aa8.46□□□□□ -1.06
SCN4A-201ENST00000435607 SERP2Q8N6R1 65 aa8.46□□□□□ -1.06
SCN4A-201ENST00000435607 PLAC8L1A1L4L8 177 aa8.46□□□□□ -1.06
SCN4A-201ENST00000435607 COL4A6Q14031 1691 aa8.46□□□□□ -1.06
SCN4A-201ENST00000435607 ODF3BA8MYP8 253 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 G3V4G9 280 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 ZNF843Q8N446 348 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 TRBV6-4A0A1B0GX49 114 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 ATP5EP56381 51 aaPredicted RBP8.45□□□□□ -1.06
SCN4A-201ENST00000435607 NOTCH4Q99466 2003 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 BDP1A6H8Y1 2624 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 FAM240AA0A1B0GVK7 77 aa8.45□□□□□ -1.06
SCN4A-201ENST00000435607 RNF185Q96GF1 192 aa8.44□□□□□ -1.06
SCN4A-201ENST00000435607 ZFHX2Q9C0A1 2572 aaPredicted RBP8.44□□□□□ -1.06
SCN4A-201ENST00000435607 CCKP06307 115 aa8.44□□□□□ -1.06
SCN4A-201ENST00000435607 M0R378 163 aa8.44□□□□□ -1.06
SCN4A-201ENST00000435607 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
SCN4A-201ENST00000435607 PPDPFQ9H3Y8 114 aa8.44□□□□□ -1.06
SCN4A-201ENST00000435607 C19orf71A6NCJ1 209 aa8.44□□□□□ -1.06
SCN4A-201ENST00000435607 NDUFC1O43677 76 aa8.44□□□□□ -1.06
SCN4A-201ENST00000435607 LELP1Q5T871 98 aa8.43□□□□□ -1.06
SCN4A-201ENST00000435607 A0A0J9YWU9 116 aa8.43□□□□□ -1.06
SCN4A-201ENST00000435607 CEP192Q8TEP8 1941 aa8.43□□□□□ -1.06
SCN4A-201ENST00000435607 DENND4CQ5VZ89 1909 aa8.42□□□□□ -1.06
SCN4A-201ENST00000435607 MPLKIPQ8TAP9 179 aa8.42□□□□□ -1.06
SCN4A-201ENST00000435607 K7EQG2 157 aa8.42□□□□□ -1.06
SCN4A-201ENST00000435607 HCFC1P51610 2035 aa8.42□□□□□ -1.06
SCN4A-201ENST00000435607 LINC00482Q8N8I6 264 aa8.42□□□□□ -1.06
SCN4A-201ENST00000435607 XAGE1AQ9HD64 81 aa8.42□□□□□ -1.06
SCN4A-201ENST00000435607 NDUFC2-KCTD14E9PQ53 114 aa8.42□□□□□ -1.06
SCN4A-201ENST00000435607 IGKV2-28A0A075B6P5 120 aa8.41□□□□□ -1.06
SCN4A-201ENST00000435607 IGKV2D-28P01615 120 aa8.41□□□□□ -1.06
SCN4A-201ENST00000435607 LMO4P61968 165 aa8.41□□□□□ -1.06
SCN4A-201ENST00000435607 PATE2Q6UY27 113 aa8.41□□□□□ -1.06
SCN4A-201ENST00000435607 IGLV5-52A0A0A0MRZ9 124 aa8.41□□□□□ -1.06
SCN4A-201ENST00000435607 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms