RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 CNFNQ9BYD5 112 aa-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 ABCA13Q86UQ4 5058 aa-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 SONP18583 2426 aaKnown RBP-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 FAM208BQ5VWN6 2430 aa-0.09□□□□□ -2.42
GCFC2-203ENST00000427862 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.42
GCFC2-203ENST00000427862 TENM2Q9NT68 2774 aa-0.1□□□□□ -2.42
GCFC2-203ENST00000427862 RYR3Q15413 4870 aa-0.1□□□□□ -2.42
GCFC2-203ENST00000427862 STAB2Q8WWQ8 2551 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 TNXBP22105 4242 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 TNFP01375 233 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 ARPC4P59998 168 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 KLK9Q2XQG4 91 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 SPRR2FQ96RM1 72 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 DOPEY1Q5JWR5 2465 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 AKAP6Q13023 2319 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 COL6A3P12111 3177 aa-0.1□□□□□ -2.43
GCFC2-203ENST00000427862 CREBBPQ92793 2442 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 NBEAL2Q6ZNJ1 2754 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 WNK2Q9Y3S1 2297 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 ZANQ9Y493 2812 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 CHD8Q9HCK8 2581 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 DEFA5Q01523 94 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 KRTAP6-2Q3LI66 62 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 Q5VSD8 79 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 CFAP126Q5VTH2 177 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 PDCD10Q9BUL8 212 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 LINC00846Q9NV44 126 aa-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 SRRM2Q9UQ35 2752 aaKnown RBP-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 EP300Q09472 2414 aaPredicted RBP-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.11□□□□□ -2.43
GCFC2-203ENST00000427862 CASKIN1Q8WXD9 1431 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 HECTD1Q9ULT8 2610 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 HIVEP1P15822 2718 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 HERC2O95714 4834 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 C10orf142B7Z368 130 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 HCG22E2RYF7 251 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 HIST1H1DP16402 221 aaKnown RBP-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 R4GMQ9 66 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 NCOR1O75376 2440 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 GRIN2AQ12879 1464 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 CACNA1AO00555 2505 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 TEP1Q99973 2627 aaKnown RBP-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 COL14A1Q05707 1796 aaKnown RBP-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 SETD2Q9BYW2 2564 aaPredicted RBP-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 CHD9Q3L8U1 2897 aa-0.12□□□□□ -2.43
GCFC2-203ENST00000427862 LRRC37A3O60309 1634 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 HERC1Q15751 4861 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 VWFP04275 2813 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 FAT1Q14517 4588 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 LAMA5O15230 3695 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 SPAARA0A1B0GVQ0 90 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 K7EQZ3 153 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 PPP1R17O96001 155 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 CFDP00746 253 aaPredicted RBP-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 SMR3BP02814 79 aaPredicted RBP-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 MT1BP07438 61 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 MT1HL1P0DM35 61 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 ASIPP42127 132 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 CCL18P55774 89 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 SELENOWP63302 87 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 LELP1Q5T871 98 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 KRTAP8-1Q8IUC2 63 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 AGPAT4-IT1Q9H0P7 198 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 PRO0255Q9UI72 69 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 COL6A5A8TX70 2615 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 DSPP15924 2871 aaKnown RBP-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 LAMC1P11047 1609 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 MYO18BQ8IUG5 2567 aa-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 SMG6Q86US8 1419 aaKnown RBP-0.13□□□□□ -2.43
GCFC2-203ENST00000427862 FLNCQ14315 2725 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 CELSR3Q9NYQ7 3312 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 PXDNQ92626 1479 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 MYH6P13533 1939 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 LRP2P98164 4655 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 PTPN13Q12923 2485 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 TRAV13-2A0A0B4J235 113 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 LOC730098B7Z3J9 87 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 H0YAA0 97 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 M0R2T5 61 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 MT1AP04731 61 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 MT1GP13640 62 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 C12orf73Q69YU5 71 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 AQP10Q96PS8 301 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 NPVFQ9HCQ7 196 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 ACANP16112 2415 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 PTPRQQ9UMZ3 2332 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 NBEAL1Q6ZS30 2694 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 ZNF609O15014 1411 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 MYOM3Q5VTT5 1437 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 USP9XQ93008 2570 aaPredicted RBP-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 C2CD3Q4AC94 2353 aa-0.14□□□□□ -2.43
GCFC2-203ENST00000427862 FLNAP21333 2647 aaKnown RBP-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 FASNP49327 2511 aaKnown RBP-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 ANKRD11Q6UB99 2663 aaPredicted RBP-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 PDZD2O15018 2839 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 MT2AP02795 61 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 PRM1P04553 51 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 DEFB1P60022 68 aa-0.15□□□□□ -2.43
GCFC2-203ENST00000427862 CCDC58Q4VC31 144 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms