RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 FAM167A-AS1Q96KT0 104 aa8.52□□□□□ -1.04
PTCH1-205ENST00000418258 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 Q6ZUT4 128 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 UBE2D1P51668 147 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 PTPRSQ13332 1948 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 TRBV10-2A0A0K0K1G8 114 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 CLEC2BQ92478 149 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 IGLV2-18A0A075B6J9 118 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 M0R2N4 97 aa8.52□□□□□ -1.05
PTCH1-205ENST00000418258 LY6G6DO95868 133 aa8.51□□□□□ -1.05
PTCH1-205ENST00000418258 Q6ZTI0 123 aa8.51□□□□□ -1.05
PTCH1-205ENST00000418258 TP53TG3Q9ULZ0 132 aa8.51□□□□□ -1.05
PTCH1-205ENST00000418258 IGHV1-58A0A0C4DH39 117 aa8.51□□□□□ -1.05
PTCH1-205ENST00000418258 CEMP1Q6PRD7 247 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-205ENST00000418258 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
PTCH1-205ENST00000418258 LINC00173Q6ZV60 143 aa8.51□□□□□ -1.05
PTCH1-205ENST00000418258 LRP4O75096 1905 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 IGKV1D-37A0A075B6S9 117 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 CTRLP40313 264 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 ZFAND2AQ8N6M9 145 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 COL4A3Q01955 1670 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 LY6G6CO95867 125 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 LINC00482Q8N8I6 264 aa8.5□□□□□ -1.05
PTCH1-205ENST00000418258 PIEZO2Q9H5I5 2752 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 LINC01548A6NM66 108 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 WISP2O76076 250 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 LMO4P61968 165 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 LRRK2Q5S007 2527 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 ZFYVE26Q68DK2 2539 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 E9PLD3 99 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 PTPRBP23467 1997 aa8.49□□□□□ -1.05
PTCH1-205ENST00000418258 HIST2H2BDQ6DRA6 164 aa8.48□□□□□ -1.05
PTCH1-205ENST00000418258 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-205ENST00000418258 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
PTCH1-205ENST00000418258 CCDC140Q96MF4 163 aa8.48□□□□□ -1.05
PTCH1-205ENST00000418258 ATOX1O00244 68 aa8.48□□□□□ -1.05
PTCH1-205ENST00000418258 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
PTCH1-205ENST00000418258 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
PTCH1-205ENST00000418258 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
PTCH1-205ENST00000418258 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
PTCH1-205ENST00000418258 SPANXCQ9NY87 97 aa8.47□□□□□ -1.05
PTCH1-205ENST00000418258 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
PTCH1-205ENST00000418258 IGLV2-14P01704 120 aa8.47□□□□□ -1.05
PTCH1-205ENST00000418258 MIFP14174 115 aa8.47□□□□□ -1.05
PTCH1-205ENST00000418258 FOXI1Q12951 378 aa8.47□□□□□ -1.05
PTCH1-205ENST00000418258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.47□□□□□ -1.05
PTCH1-205ENST00000418258 SPRY4Q9C004 299 aa8.46□□□□□ -1.06
PTCH1-205ENST00000418258 MSMPQ1L6U9 139 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 KIR2DL5BA0A0G2JN68 375 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 KIR2DL5BA0A0G2JPC4 375 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 BPY2O14599 106 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 KIR2DL5AQ8N109 375 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 TRAV10A0A0B4J240 114 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 FXYD2P54710 66 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 C20orf203Q8NBC4 194 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 PDE6GP18545 87 aa8.45□□□□□ -1.06
PTCH1-205ENST00000418258 ODF3BA8MYP8 253 aa8.44□□□□□ -1.06
PTCH1-205ENST00000418258 B5MCH6 92 aa8.44□□□□□ -1.06
PTCH1-205ENST00000418258 MIAQ16674 131 aa8.44□□□□□ -1.06
PTCH1-205ENST00000418258 ODF1Q14990 250 aa8.44□□□□□ -1.06
PTCH1-205ENST00000418258 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
PTCH1-205ENST00000418258 UPK3BQ9BT76 320 aa8.44□□□□□ -1.06
PTCH1-205ENST00000418258 UBE2D3P61077 147 aa8.44□□□□□ -1.06
PTCH1-205ENST00000418258 USP17L23D6RBM5 183 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 Q6ZSV7 163 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 H7C423 109 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 IGF1P05019 195 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 CRYGBP07316 175 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 HRCT1Q6UXD1 115 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 Q6ZSR3 168 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 SMIM20Q8N5G0 67 aa8.43□□□□□ -1.06
PTCH1-205ENST00000418258 WFDC10BQ8IUB3 73 aa8.42□□□□□ -1.06
PTCH1-205ENST00000418258 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
PTCH1-205ENST00000418258 NDUFC2O95298 119 aa8.42□□□□□ -1.06
PTCH1-205ENST00000418258 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
PTCH1-205ENST00000418258 C20orf173Q96LM9 149 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 K7EQG2 157 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 TDRG1Q3Y452 100 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 TRBV6-8A0A0A6YYG3 113 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 WFDC2Q14508 124 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 SPINK6Q6UWN8 80 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 NUPR1O60356 82 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
PTCH1-205ENST00000418258 HIGD1BQ9P298 99 aa8.4□□□□□ -1.06
PTCH1-205ENST00000418258 SS18L2Q9UHA2 77 aa8.4□□□□□ -1.06
PTCH1-205ENST00000418258 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-205ENST00000418258 ZNF80P51504 273 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-205ENST00000418258 IGKV2-28A0A075B6P5 120 aa8.4□□□□□ -1.07
PTCH1-205ENST00000418258 IGKV2D-28P01615 120 aa8.4□□□□□ -1.07
PTCH1-205ENST00000418258 CFAP126Q5VTH2 177 aa8.4□□□□□ -1.07
PTCH1-205ENST00000418258 NEXN-AS1Q8NBZ9 246 aa8.4□□□□□ -1.07
PTCH1-205ENST00000418258 C9orf85Q96MD7 179 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms