RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 RNF183Q96D59 192 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 NPBQ8NG41 125 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 C10orf142B7Z368 130 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 PIP4P1Q86T03 277 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 FRYLO94915 3013 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 A0A0B4J2C4 111 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 TCL1BO95988 128 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 IGLC6P0CF74 106 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 SPANXB1Q9NS25 103 aaPredicted RBP9.81□□□□□ -0.84
SCN1B-202ENST00000415950 VPREB3Q9UKI3 123 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 DEFB4AO15263 64 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 HERV-K104P63124 156 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 FASNP49327 2511 aaKnown RBP9.8□□□□□ -0.84
SCN1B-202ENST00000415950 MUC4Q99102 2169 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 NDUFS5O43920 106 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 ACYP1P07311 99 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 TOMM6Q96B49 74 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 P0DMU3 169 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 FAM231AP0DMU4 169 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 FAM231CP0DMU5 169 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 MIR7-3HGQ8N6C7 128 aa9.8□□□□□ -0.84
SCN1B-202ENST00000415950 TMEM258P61165 79 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 UBE2BP63146 152 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 C11orf21Q9P2W6 132 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 CEP192Q8TEP8 1941 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 CPAMD8Q8IZJ3 1885 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 TRBV10-2A0A0K0K1G8 114 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 NDUFA11Q86Y39 141 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 H0YGX0 51 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 IGHV3-30P01768 117 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 IGHV3-33P01772 117 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 ATP5G1P05496 136 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 CRYGBP07316 175 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 IGHV3-30-5P0DP03 117 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 RNF185Q96GF1 192 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 VSIG2Q96IQ7 327 aa9.79□□□□□ -0.84
SCN1B-202ENST00000415950 C9orf47Q6ZRZ4 202 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 CAMK2N2Q96S95 79 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 LINC00574Q9H8X3 128 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 IGHV4OR15-8A0A075B7B6 117 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 A0A087WW49 117 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 H3BUA1 57 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 SMAD5-AS1Q9Y6J3 95 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 PIFOQ8TCI5 191 aa9.78□□□□□ -0.84
SCN1B-202ENST00000415950 PSMB8P28062 276 aa9.77□□□□□ -0.84
SCN1B-202ENST00000415950 APOC4P55056 127 aa9.77□□□□□ -0.84
SCN1B-202ENST00000415950 C20orf203Q8NBC4 194 aa9.77□□□□□ -0.84
SCN1B-202ENST00000415950 WFDC11Q8NEX6 87 aa9.77□□□□□ -0.84
SCN1B-202ENST00000415950 TIMM17AQ99595 171 aa9.77□□□□□ -0.84
SCN1B-202ENST00000415950 ATOX1O00244 68 aa9.77□□□□□ -0.85
SCN1B-202ENST00000415950 CCDC140Q96MF4 163 aa9.77□□□□□ -0.85
SCN1B-202ENST00000415950 SPANXDQ9BXN6 97 aa9.77□□□□□ -0.85
SCN1B-202ENST00000415950 TNRC6BQ9UPQ9 1833 aaKnown RBP9.77□□□□□ -0.85
SCN1B-202ENST00000415950 IGHG2P01859 326 aa9.77□□□□□ -0.85
SCN1B-202ENST00000415950 C5orf56Q8N8D9 126 aa9.77□□□□□ -0.85
SCN1B-202ENST00000415950 TEX49A0A1B0GTD5 131 aa9.77□□□□□ -0.85
SCN1B-202ENST00000415950 CLPSL1A2RUU4 121 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 COX7A2LO14548 114 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 CLUHP3Q96NS8 147 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 C14orf132Q9NPU4 83 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 LRP4O75096 1905 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 K7EQD1 137 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 NCR3O14931 201 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 HIST2H2BDQ6DRA6 164 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 Q6ZUT4 128 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
SCN1B-202ENST00000415950 EPG5Q9HCE0 2579 aa9.75□□□□□ -0.85
SCN1B-202ENST00000415950 ETDCA0A1B0GVM5 59 aa9.75□□□□□ -0.85
SCN1B-202ENST00000415950 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
SCN1B-202ENST00000415950 FUSP35637 526 aaKnown RBP eCLIP9.75□□□□□ -0.85
SCN1B-202ENST00000415950 NREPQ16612 68 aa9.75□□□□□ -0.85
SCN1B-202ENST00000415950 Q8NA96 180 aa9.75□□□□□ -0.85
SCN1B-202ENST00000415950 A8MZ25 164 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 J3QLI3 93 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 PTPRBP23467 1997 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 H3BT86 120 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 PRM2P04554 102 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 TRAV23DV6A0A075B6W5 121 aa9.74□□□□□ -0.85
SCN1B-202ENST00000415950 C20orf173Q96LM9 149 aa9.73□□□□□ -0.85
SCN1B-202ENST00000415950 A0A096LNJ9 63 aa9.73□□□□□ -0.85
SCN1B-202ENST00000415950 WFDC9Q8NEX5 89 aa9.73□□□□□ -0.85
SCN1B-202ENST00000415950 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
SCN1B-202ENST00000415950 DAZ2Q13117 558 aaKnown RBP9.72□□□□□ -0.85
SCN1B-202ENST00000415950 DAZ4Q86SG3 579 aaKnown RBP9.72□□□□□ -0.85
SCN1B-202ENST00000415950 DAZ3Q9NR90 486 aaKnown RBP9.72□□□□□ -0.85
SCN1B-202ENST00000415950 KLK12Q9UKR0 248 aa9.72□□□□□ -0.85
SCN1B-202ENST00000415950 J3KT08 172 aa9.72□□□□□ -0.85
SCN1B-202ENST00000415950 PRR9Q5T870 116 aa9.72□□□□□ -0.85
SCN1B-202ENST00000415950 NFE4Q86UQ8 179 aa9.72□□□□□ -0.85
SCN1B-202ENST00000415950 Q6ZS46 218 aa9.72□□□□□ -0.85
SCN1B-202ENST00000415950 HHLA3Q9XRX5 114 aa9.72□□□□□ -0.85
SCN1B-202ENST00000415950 USP24Q9UPU5 2620 aa9.71□□□□□ -0.85
SCN1B-202ENST00000415950 A0A0J9YXY3 114 aa9.71□□□□□ -0.86
SCN1B-202ENST00000415950 CDKN2A-AS1Q9UH64 79 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms