RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 NPYP01303 97 aa2.9□□□□□ -1.95
LINC01048-201ENST00000414480 LTAP01374 205 aa2.9□□□□□ -1.95
LINC01048-201ENST00000414480 SLC25A16P16260 332 aa2.9□□□□□ -1.95
LINC01048-201ENST00000414480 PEBP1P30086 187 aaKnown RBP2.9□□□□□ -1.95
LINC01048-201ENST00000414480 FCER1GP30273 86 aa2.9□□□□□ -1.95
LINC01048-201ENST00000414480 SPINT3P49223 89 aa2.9□□□□□ -1.95
LINC01048-201ENST00000414480 RPL18Q07020 188 aaKnown RBP2.9□□□□□ -1.95
LINC01048-201ENST00000414480 SLC25A29Q8N8R3 303 aa2.9□□□□□ -1.95
LINC01048-201ENST00000414480 LINC00476Q8WZB0 136 aa2.9□□□□□ -1.95
LINC01048-201ENST00000414480 CHCHD1Q96BP2 118 aaKnown RBP2.9□□□□□ -1.95
LINC01048-201ENST00000414480 A0A0B4J2C4 111 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 IGHV4-28A0A0C4DH34 117 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 MYMXA0A1B0GTQ4 84 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 DEFB108AA8MXU0 73 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 CPSF4O95639 269 aaKnown RBP2.89□□□□□ -1.95
LINC01048-201ENST00000414480 CCKP06307 115 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 PRB4P10163 310 aaPredicted RBP2.89□□□□□ -1.95
LINC01048-201ENST00000414480 CD28P10747 220 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 RHOHQ15669 191 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 LINC00242Q5T6M2 205 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 MIR17HGQ75NE6 70 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 SPTSSBQ8NFR3 76 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 ITLN1Q8WWA0 313 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 MED12Q93074 2177 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 DIRC1Q969H9 104 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 RMI2Q96E14 147 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 FAM218AQ96MZ4 157 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 CCL19Q99731 98 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 UPK3BQ9BT76 320 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 KRTAP1-5Q9BYS1 174 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 ZNF492Q9P255 531 aa2.89□□□□□ -1.95
LINC01048-201ENST00000414480 NUP214P35658 2090 aaPredicted RBP2.89□□□□□ -1.95
LINC01048-201ENST00000414480 DSCAMO60469 2012 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 HYDINQ4G0P3 5121 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 IGHV3OR15-7A0A075B7D8 119 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 TRAV3A0A0B4J244 114 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 C2orf70A6NJV1 201 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 PEX7O00628 323 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 LEPROTO15243 131 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 EFNA4P52798 201 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 FXYD2P54710 66 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 ATXN8Q156A1 80 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 SPANXN1Q5VSR9 72 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 CEMP1Q6PRD7 247 aaPredicted RBP2.88□□□□□ -1.95
LINC01048-201ENST00000414480 SFTA2Q6UW10 78 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 ATP11AUNQ6ZP68 121 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 NOTCH2NLQ7Z3S9 236 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 MED12LQ86YW9 2145 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 C9orf106Q8NAJ2 232 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 C11orf52Q96A22 123 aa2.88□□□□□ -1.95
LINC01048-201ENST00000414480 MALRD1Q5VYJ5 2156 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 IGHV3OR16-12A0A075B7B8 117 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 IGHV3-20A0A0C4DH32 117 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 PINLYPA6NC86 204 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 K7EQD1 137 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 SAA1P0DJI8 122 aaPredicted RBP2.87□□□□□ -1.95
LINC01048-201ENST00000414480 COX7A1P24310 79 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 RNASE4P34096 147 aaKnown RBP2.87□□□□□ -1.95
LINC01048-201ENST00000414480 FGF12P61328 243 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 GNB1P62873 340 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 IFI27L1Q96BM0 104 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 SCGB3A1Q96QR1 104 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 LINC00474Q9P2X8 69 aa2.87□□□□□ -1.95
LINC01048-201ENST00000414480 RYR2Q92736 4967 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 SNRNP200O75643 2136 aaKnown RBP2.86□□□□□ -1.95
LINC01048-201ENST00000414480 IGLV5-45A0A087WSX0 123 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 TCRBV4S1A1TA0A5B7 111 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 DNAJC9-AS1A6NH13 148 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 IQCF6A8MYZ5 107 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 PIN1P1O15428 100 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 PRSS1P07477 247 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 PRSS2P07478 247 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 IGHV4-30-4P0DP06 118 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 ZNF32P17041 273 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 IGHV1-2P23083 117 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 KRTAP10-6P60371 365 aaPredicted RBP2.86□□□□□ -1.95
LINC01048-201ENST00000414480 HIST1H4AP62805 103 aaKnown RBP2.86□□□□□ -1.95
LINC01048-201ENST00000414480 KISS1Q15726 138 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 ESRGQ1W209 222 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 REG3GQ6UW15 175 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 CLECL1Q8IZS7 167 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 LINC00269Q8N2A0 174 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 Q8N2B8 174 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 ZNF563Q8TA94 476 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 NABP2Q9BQ15 211 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 TTTY13Q9BZ97 58 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 MRPL35Q9NZE8 188 aaKnown RBP2.86□□□□□ -1.95
LINC01048-201ENST00000414480 MSRB1Q9NZV6 116 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 DKK2Q9UBU2 259 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 CMYA5Q8N3K9 4069 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 CADP27708 2225 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 PCLOQ9Y6V0 5065 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 DOCK7Q96N67 2140 aa2.86□□□□□ -1.95
LINC01048-201ENST00000414480 NOTCH3Q9UM47 2321 aa2.85□□□□□ -1.95
LINC01048-201ENST00000414480 TRAV13-2A0A0B4J235 113 aa2.85□□□□□ -1.95
LINC01048-201ENST00000414480 TRBV10-2A0A0K0K1G8 114 aa2.85□□□□□ -1.95
LINC01048-201ENST00000414480 A0A1B0GW54 56 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms