RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TLN2Q9Y4G6 2542 aa10.7□□□□□ -0.7
SEMA3F-202ENST00000413852 IGHV4-59P01825 116 aa10.7□□□□□ -0.7
SEMA3F-202ENST00000413852 NBL1P41271 181 aa10.7□□□□□ -0.7
SEMA3F-202ENST00000413852 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
SEMA3F-202ENST00000413852 M0R2P5 195 aa10.7□□□□□ -0.7
SEMA3F-202ENST00000413852 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
SEMA3F-202ENST00000413852 WNK1Q9H4A3 2382 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 I3L3M4 83 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 LITAFQ99732 161 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 TIMM21Q9BVV7 248 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 CHD6Q8TD26 2715 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 IGLV1-40P01703 118 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 C18orf65Q6ZTR6 163 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 TRBV6-5A0A0K0K1A5 114 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 CCDC179H3BU77 68 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 NF1P21359 2839 aa10.69□□□□□ -0.7
SEMA3F-202ENST00000413852 GNLYP22749 145 aa10.68□□□□□ -0.7
SEMA3F-202ENST00000413852 RPL32P62910 135 aaKnown RBP10.68□□□□□ -0.7
SEMA3F-202ENST00000413852 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
SEMA3F-202ENST00000413852 CITED1Q99966 193 aa10.68□□□□□ -0.7
SEMA3F-202ENST00000413852 ODF3Q96PU9 254 aa10.67□□□□□ -0.7
SEMA3F-202ENST00000413852 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
SEMA3F-202ENST00000413852 NDUFA7O95182 113 aa10.67□□□□□ -0.7
SEMA3F-202ENST00000413852 NBPF19A0A087WUL8 3843 aa10.67□□□□□ -0.7
SEMA3F-202ENST00000413852 MYO18BQ8IUG5 2567 aa10.66□□□□□ -0.7
SEMA3F-202ENST00000413852 SNCGO76070 127 aa10.66□□□□□ -0.7
SEMA3F-202ENST00000413852 ATXN8Q156A1 80 aa10.66□□□□□ -0.7
SEMA3F-202ENST00000413852 C2orf82Q6UX34 121 aa10.66□□□□□ -0.7
SEMA3F-202ENST00000413852 A0A0B4J2C4 111 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 H7C423 109 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 GAGE2BQ13066 116 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 GAGE2EQ4V326 116 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 C15orf53Q8NAA6 179 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 GAGE2DQ9UEU5 116 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 TEX15Q9BXT5 2789 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 JMJD1CQ15652 2540 aa10.65□□□□□ -0.7
SEMA3F-202ENST00000413852 EPG5Q9HCE0 2579 aa10.65□□□□□ -0.71
SEMA3F-202ENST00000413852 SNRPD3P62318 126 aaKnown RBP10.65□□□□□ -0.71
SEMA3F-202ENST00000413852 RHOHQ15669 191 aa10.65□□□□□ -0.71
SEMA3F-202ENST00000413852 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
SEMA3F-202ENST00000413852 K7EQG2 157 aa10.64□□□□□ -0.71
SEMA3F-202ENST00000413852 CFHR3Q02985 330 aa10.64□□□□□ -0.71
SEMA3F-202ENST00000413852 DEFB112Q30KQ8 113 aa10.64□□□□□ -0.71
SEMA3F-202ENST00000413852 LINC00467Q9BRT7 94 aa10.64□□□□□ -0.71
SEMA3F-202ENST00000413852 ATP5J2P56134 94 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 DEFB131AP59861 70 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 FAM208BQ5VWN6 2430 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 PTPN13Q12923 2485 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 PKD1L2Q7Z442 2459 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 PSMB8P28062 276 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 NDUFV3P56181 108 aaKnown RBP10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 PIMREGQ9BSJ6 248 aa10.63□□□□□ -0.71
SEMA3F-202ENST00000413852 SONP18583 2426 aaKnown RBP10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 ABCA12Q86UK0 2595 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 RBMY1BA6NDE4 496 aaKnown RBP10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 RBMY1EA6NEQ0 496 aaKnown RBP10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 RBMY1DP0C7P1 496 aaKnown RBP10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 TNFRSF18Q9Y5U5 241 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 H3BMM0 161 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 RPL13AP40429 203 aaKnown RBP10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 COX6A2Q02221 97 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 CCL19Q99731 98 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 TRBV10-2A0A0K0K1G8 114 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 TMEM262E9PQX1 116 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 SLURP1P55000 103 aa10.62□□□□□ -0.71
SEMA3F-202ENST00000413852 CACNA1AO00555 2505 aa10.61□□□□□ -0.71
SEMA3F-202ENST00000413852 ZNF469Q96JG9 3925 aaPredicted RBP10.61□□□□□ -0.71
SEMA3F-202ENST00000413852 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.61□□□□□ -0.71
SEMA3F-202ENST00000413852 C10orf105Q8TEF2 133 aa10.61□□□□□ -0.71
SEMA3F-202ENST00000413852 IGHV1-58A0A0C4DH39 117 aa10.61□□□□□ -0.71
SEMA3F-202ENST00000413852 ZFYVE26Q68DK2 2539 aa10.61□□□□□ -0.71
SEMA3F-202ENST00000413852 IGHV3OR16-12A0A075B7B8 117 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 CHCHD7Q9BUK0 85 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 K7EMT4 169 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 MSMBP08118 114 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 HOXD3P31249 432 aaPredicted RBP10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 MRPS36P82909 103 aaKnown RBP10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 H3BUA1 57 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 GAGE5Q13069 117 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 GAGE6Q13070 117 aa10.6□□□□□ -0.71
SEMA3F-202ENST00000413852 ANKRD17O75179 2603 aaKnown RBP10.59□□□□□ -0.71
SEMA3F-202ENST00000413852 TRBV30A0A0K0K1B3 111 aa10.59□□□□□ -0.71
SEMA3F-202ENST00000413852 ACACBO00763 2458 aa10.59□□□□□ -0.71
SEMA3F-202ENST00000413852 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
SEMA3F-202ENST00000413852 MIAQ16674 131 aa10.58□□□□□ -0.72
SEMA3F-202ENST00000413852 CHCHD5Q9BSY4 110 aa10.58□□□□□ -0.72
SEMA3F-202ENST00000413852 IGHV3-53P01767 116 aa10.58□□□□□ -0.72
SEMA3F-202ENST00000413852 Q8N2B8 174 aa10.58□□□□□ -0.72
SEMA3F-202ENST00000413852 BRI3O95415 125 aa10.57□□□□□ -0.72
SEMA3F-202ENST00000413852 IFITM1P13164 125 aa10.57□□□□□ -0.72
SEMA3F-202ENST00000413852 NAV2Q8IVL1 2488 aa10.57□□□□□ -0.72
SEMA3F-202ENST00000413852 CITED2Q99967 270 aaPredicted RBP10.56□□□□□ -0.72
SEMA3F-202ENST00000413852 LINC00694P0DN24 101 aa10.56□□□□□ -0.72
SEMA3F-202ENST00000413852 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms