RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
HDAC11-204ENST00000404040 TRAV8-6A0A0B4J262 113 aa12.08□□□□□ -0.48
HDAC11-204ENST00000404040 GCSHP23434 173 aa12.08□□□□□ -0.48
HDAC11-204ENST00000404040 COX19Q49B96 90 aa12.08□□□□□ -0.48
HDAC11-204ENST00000404040 RNF185Q96GF1 192 aa12.08□□□□□ -0.48
HDAC11-204ENST00000404040 HAMPP81172 84 aa12.07□□□□□ -0.48
HDAC11-204ENST00000404040 LELP1Q5T871 98 aa12.07□□□□□ -0.48
HDAC11-204ENST00000404040 Q9UF83 564 aa12.07□□□□□ -0.48
HDAC11-204ENST00000404040 TRAV9-2A0A087WT02 112 aa12.06□□□□□ -0.48
HDAC11-204ENST00000404040 TRAV26-2A0A0B4J265 109 aa12.06□□□□□ -0.48
HDAC11-204ENST00000404040 FAM229AH3BQW9 127 aa12.06□□□□□ -0.48
HDAC11-204ENST00000404040 PPBPP02775 128 aa12.06□□□□□ -0.48
HDAC11-204ENST00000404040 OR10J3Q5JRS4 329 aa12.06□□□□□ -0.48
HDAC11-204ENST00000404040 URGCP-MRPS24S4R325 110 aa12.06□□□□□ -0.48
HDAC11-204ENST00000404040 K7EP13 123 aa12.05□□□□□ -0.48
HDAC11-204ENST00000404040 TRBV6-5A0A0K0K1A5 114 aa12.04□□□□□ -0.48
HDAC11-204ENST00000404040 CKS2P33552 79 aa12.04□□□□□ -0.48
HDAC11-204ENST00000404040 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
HDAC11-204ENST00000404040 WFDC10BQ8IUB3 73 aa12.04□□□□□ -0.48
HDAC11-204ENST00000404040 TMEM70Q9BUB7 260 aa12.04□□□□□ -0.48
HDAC11-204ENST00000404040 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
HDAC11-204ENST00000404040 J3QL48 77 aa12.02□□□□□ -0.49
HDAC11-204ENST00000404040 HLA-DQA1P01909 254 aa12.02□□□□□ -0.49
HDAC11-204ENST00000404040 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.49
HDAC11-204ENST00000404040 PHOX2AO14813 284 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 MT-ND6P03923 174 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 PKIAP61925 76 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 COTL1Q14019 142 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 SMCO4Q9NRQ5 59 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 LAMTOR2Q9Y2Q5 125 aa12.01□□□□□ -0.49
HDAC11-204ENST00000404040 TRBV25-1A0A075B6N4 114 aa12□□□□□ -0.49
HDAC11-204ENST00000404040 IGLV5-52A0A0A0MRZ9 124 aa12□□□□□ -0.49
HDAC11-204ENST00000404040 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
HDAC11-204ENST00000404040 IGHV3-38A0A0C4DH36 116 aa12□□□□□ -0.49
HDAC11-204ENST00000404040 SDHAF1A6NFY7 115 aa12□□□□□ -0.49
HDAC11-204ENST00000404040 C20orf78Q9BR46 151 aa12□□□□□ -0.49
HDAC11-204ENST00000404040 TRBV24-1A0A075B6N3 115 aa11.99□□□□□ -0.49
HDAC11-204ENST00000404040 D6R8Y8 96 aa11.99□□□□□ -0.49
HDAC11-204ENST00000404040 I3L3M4 83 aa11.99□□□□□ -0.49
HDAC11-204ENST00000404040 NCR2O95944 276 aa11.99□□□□□ -0.49
HDAC11-204ENST00000404040 SUMO2P61956 95 aaKnown RBP11.99□□□□□ -0.49
HDAC11-204ENST00000404040 ELOBQ15370 118 aa11.99□□□□□ -0.49
HDAC11-204ENST00000404040 TMEM136Q6ZRR5 245 aa11.99□□□□□ -0.49
HDAC11-204ENST00000404040 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
HDAC11-204ENST00000404040 NTN5Q8WTR8 489 aaPredicted RBP11.99□□□□□ -0.49
HDAC11-204ENST00000404040 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
HDAC11-204ENST00000404040 VCYO14598 125 aa11.98□□□□□ -0.49
HDAC11-204ENST00000404040 PMCHP20382 165 aa11.98□□□□□ -0.49
HDAC11-204ENST00000404040 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
HDAC11-204ENST00000404040 NRACQ8N912 160 aa11.98□□□□□ -0.49
HDAC11-204ENST00000404040 CHCHD7Q9BUK0 85 aa11.98□□□□□ -0.49
HDAC11-204ENST00000404040 DNAH8Q96JB1 4490 aa11.98□□□□□ -0.49
HDAC11-204ENST00000404040 TRBV27A0A0K0K1C4 114 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 SMKR1H3BMG3 65 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 TCAPO15273 167 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 APCSP02743 223 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 RPL32P62910 135 aaKnown RBP11.97□□□□□ -0.49
HDAC11-204ENST00000404040 IQCJQ1A5X6 159 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 LINC01556Q5JQF7 62 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 ATRAIDQ6UW56 229 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
HDAC11-204ENST00000404040 GAS8-AS1O95177 125 aa11.96□□□□□ -0.49
HDAC11-204ENST00000404040 POLR2KP53803 58 aaKnown RBP11.96□□□□□ -0.49
HDAC11-204ENST00000404040 KIR2DL4Q99706 377 aa11.96□□□□□ -0.49
HDAC11-204ENST00000404040 TGIF2-C20orf24A0A0A6YYL0 155 aa11.95□□□□□ -0.5
HDAC11-204ENST00000404040 PSCAO43653 123 aa11.95□□□□□ -0.5
HDAC11-204ENST00000404040 AMTP48728 403 aa11.95□□□□□ -0.5
HDAC11-204ENST00000404040 CHCHD5Q9BSY4 110 aa11.95□□□□□ -0.5
HDAC11-204ENST00000404040 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
HDAC11-204ENST00000404040 HMCN2Q8NDA2 5059 aa11.95□□□□□ -0.5
HDAC11-204ENST00000404040 A0A087WX48 190 aa11.94□□□□□ -0.5
HDAC11-204ENST00000404040 NTM-AS1Q6ZSK4 140 aa11.94□□□□□ -0.5
HDAC11-204ENST00000404040 NIT1Q86X76 327 aa11.94□□□□□ -0.5
HDAC11-204ENST00000404040 FAM30AQ9NZY2 134 aa11.94□□□□□ -0.5
HDAC11-204ENST00000404040 UBE2L6O14933 153 aa11.93□□□□□ -0.5
HDAC11-204ENST00000404040 NPYP01303 97 aa11.93□□□□□ -0.5
HDAC11-204ENST00000404040 Q8N814 137 aa11.93□□□□□ -0.5
HDAC11-204ENST00000404040 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
HDAC11-204ENST00000404040 PRSS47A8MTI9 375 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 KRTAP29-1A8MX34 341 aaPredicted RBP11.92□□□□□ -0.5
HDAC11-204ENST00000404040 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 H7C423 109 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 S100A1P23297 94 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 FCER1GP30273 86 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 CBLN2Q8IUK8 224 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 YPEL4Q96NS1 127 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 SMIM2Q9BVW6 85 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 MRPL18Q9H0U6 180 aaKnown RBP11.92□□□□□ -0.5
HDAC11-204ENST00000404040 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
HDAC11-204ENST00000404040 FABP9Q0Z7S8 132 aa11.91□□□□□ -0.5
HDAC11-204ENST00000404040 IGHV3-30P01768 117 aa11.9□□□□□ -0.5
HDAC11-204ENST00000404040 IGHV3-33P01772 117 aa11.9□□□□□ -0.5
HDAC11-204ENST00000404040 PLA2G1BP04054 148 aaKnown RBP11.9□□□□□ -0.5
HDAC11-204ENST00000404040 IGHV3-30-3P0DP02 117 aa11.9□□□□□ -0.5
HDAC11-204ENST00000404040 IGHV3-30-5P0DP03 117 aa11.9□□□□□ -0.5
HDAC11-204ENST00000404040 SMAGPQ0VAQ4 97 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms