RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 KLK5Q9Y337 293 aaPredicted RBP13.06□□□□□ -0.32
UBFD1-201ENST00000395878 NOTCH2Q04721 2471 aa13.06□□□□□ -0.32
UBFD1-201ENST00000395878 C19orf84I3L1E1 186 aa13.05□□□□□ -0.32
UBFD1-201ENST00000395878 UFSP1Q6NVU6 142 aa13.05□□□□□ -0.32
UBFD1-201ENST00000395878 TCL1BO95988 128 aa13.05□□□□□ -0.32
UBFD1-201ENST00000395878 HIST2H2BDQ6DRA6 164 aa13.05□□□□□ -0.32
UBFD1-201ENST00000395878 ZFAND3Q9H8U3 227 aa13.05□□□□□ -0.32
UBFD1-201ENST00000395878 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
UBFD1-201ENST00000395878 DEFB114Q30KQ6 69 aa13.05□□□□□ -0.32
UBFD1-201ENST00000395878 H7C423 109 aa13.04□□□□□ -0.32
UBFD1-201ENST00000395878 PTH2Q96A98 100 aa13.04□□□□□ -0.32
UBFD1-201ENST00000395878 C20orf173Q96LM9 149 aa13.04□□□□□ -0.32
UBFD1-201ENST00000395878 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
UBFD1-201ENST00000395878 IGHV4-31P0DP07 118 aa13.03□□□□□ -0.32
UBFD1-201ENST00000395878 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
UBFD1-201ENST00000395878 WFDC9Q8NEX5 89 aa13.03□□□□□ -0.32
UBFD1-201ENST00000395878 LINC00643Q86TS7 51 aa13.03□□□□□ -0.32
UBFD1-201ENST00000395878 KIAA1549LQ6ZVL6 1849 aa13.03□□□□□ -0.32
UBFD1-201ENST00000395878 LINC00467Q9BRT7 94 aa13.02□□□□□ -0.32
UBFD1-201ENST00000395878 CHKB-CPT1BH3BT56 60 aa13.02□□□□□ -0.32
UBFD1-201ENST00000395878 REG3AQ06141 175 aa13.02□□□□□ -0.32
UBFD1-201ENST00000395878 TRAV26-1A0A087WT03 109 aa13.01□□□□□ -0.33
UBFD1-201ENST00000395878 LINC00269Q8N2A0 174 aa13.01□□□□□ -0.33
UBFD1-201ENST00000395878 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
UBFD1-201ENST00000395878 C5orf47Q569G3 176 aa13.01□□□□□ -0.33
UBFD1-201ENST00000395878 WNK1Q9H4A3 2382 aa13.01□□□□□ -0.33
UBFD1-201ENST00000395878 ZNF22P17026 224 aaPredicted RBP13□□□□□ -0.33
UBFD1-201ENST00000395878 C14orf132Q9NPU4 83 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 TNRC6BQ9UPQ9 1833 aaKnown RBP13□□□□□ -0.33
UBFD1-201ENST00000395878 IGLV4-3A0A075B6K6 122 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 TMEM223A0PJW6 202 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 CSPG4Q6UVK1 2322 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 CRIP1P50238 77 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 C11orf45Q8TAV5 145 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 U3KQK5 164 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 FAM222AQ5U5X8 452 aa13□□□□□ -0.33
UBFD1-201ENST00000395878 J3KT08 172 aa12.99□□□□□ -0.33
UBFD1-201ENST00000395878 SPANXB1Q9NS25 103 aaPredicted RBP12.99□□□□□ -0.33
UBFD1-201ENST00000395878 C14orf177Q52M58 125 aa12.99□□□□□ -0.33
UBFD1-201ENST00000395878 C11orf71Q6IPW1 123 aa12.98□□□□□ -0.33
UBFD1-201ENST00000395878 CHCHD10Q8WYQ3 142 aaPredicted RBP12.98□□□□□ -0.33
UBFD1-201ENST00000395878 IGKV2D-26A0A0A0MRZ7 120 aa12.98□□□□□ -0.33
UBFD1-201ENST00000395878 M0QY20 66 aa12.98□□□□□ -0.33
UBFD1-201ENST00000395878 MED12LQ86YW9 2145 aa12.97□□□□□ -0.33
UBFD1-201ENST00000395878 YPEL4Q96NS1 127 aa12.97□□□□□ -0.33
UBFD1-201ENST00000395878 RNF185Q96GF1 192 aa12.97□□□□□ -0.33
UBFD1-201ENST00000395878 ALPK3Q96L96 1907 aa12.96□□□□□ -0.33
UBFD1-201ENST00000395878 CFAP126Q5VTH2 177 aa12.96□□□□□ -0.33
UBFD1-201ENST00000395878 B9D2Q9BPU9 175 aa12.96□□□□□ -0.33
UBFD1-201ENST00000395878 C4orf48Q5BLP8 95 aa12.96□□□□□ -0.33
UBFD1-201ENST00000395878 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.34
UBFD1-201ENST00000395878 ATRXP46100 2492 aa12.95□□□□□ -0.34
UBFD1-201ENST00000395878 IL17DQ8TAD2 202 aa12.95□□□□□ -0.34
UBFD1-201ENST00000395878 IGLV2-11P01706 119 aa12.94□□□□□ -0.34
UBFD1-201ENST00000395878 LINC00308Q8TCZ7 52 aa12.94□□□□□ -0.34
UBFD1-201ENST00000395878 TRBV6-4A0A1B0GX49 114 aa12.94□□□□□ -0.34
UBFD1-201ENST00000395878 PCDH15Q96QU1 1955 aa12.94□□□□□ -0.34
UBFD1-201ENST00000395878 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
UBFD1-201ENST00000395878 Q6ZSV7 163 aa12.93□□□□□ -0.34
UBFD1-201ENST00000395878 TRBV6-5A0A0K0K1A5 114 aa12.93□□□□□ -0.34
UBFD1-201ENST00000395878 CACNA1AO00555 2505 aa12.93□□□□□ -0.34
UBFD1-201ENST00000395878 TRBV27A0A0K0K1C4 114 aa12.93□□□□□ -0.34
UBFD1-201ENST00000395878 Q8N6K4 173 aa12.92□□□□□ -0.34
UBFD1-201ENST00000395878 TRBV6-8A0A0A6YYG3 113 aa12.92□□□□□ -0.34
UBFD1-201ENST00000395878 PYGO1Q9Y3Y4 419 aa12.92□□□□□ -0.34
UBFD1-201ENST00000395878 BPY2O14599 106 aa12.92□□□□□ -0.34
UBFD1-201ENST00000395878 NDUFC2O95298 119 aa12.92□□□□□ -0.34
UBFD1-201ENST00000395878 H0Y9J4 135 aa12.91□□□□□ -0.34
UBFD1-201ENST00000395878 PRB2P02812 416 aaPredicted RBP12.91□□□□□ -0.34
UBFD1-201ENST00000395878 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
UBFD1-201ENST00000395878 OTOGLQ3ZCN5 2332 aa12.91□□□□□ -0.34
UBFD1-201ENST00000395878 IGKV2-24A0A0C4DH68 120 aa12.91□□□□□ -0.34
UBFD1-201ENST00000395878 UPK3BQ9BT76 320 aa12.91□□□□□ -0.34
UBFD1-201ENST00000395878 PRO3102Q9H379 93 aa12.91□□□□□ -0.34
UBFD1-201ENST00000395878 PRR14LQ5THK1 2151 aa12.91□□□□□ -0.34
UBFD1-201ENST00000395878 TEX49A0A1B0GTD5 131 aa12.9□□□□□ -0.34
UBFD1-201ENST00000395878 FAM110AQ9BQ89 295 aa12.9□□□□□ -0.34
UBFD1-201ENST00000395878 MIFP14174 115 aa12.9□□□□□ -0.34
UBFD1-201ENST00000395878 TRBV30A0A0K0K1B3 111 aa12.89□□□□□ -0.35
UBFD1-201ENST00000395878 PSMG3-AS1Q96PY0 264 aa12.89□□□□□ -0.35
UBFD1-201ENST00000395878 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
UBFD1-201ENST00000395878 DSCAML1Q8TD84 2053 aa12.89□□□□□ -0.35
UBFD1-201ENST00000395878 CRYGDP07320 174 aa12.89□□□□□ -0.35
UBFD1-201ENST00000395878 HIGD2AQ9BW72 106 aa12.89□□□□□ -0.35
UBFD1-201ENST00000395878 PCNX3Q9H6A9 2034 aa12.88□□□□□ -0.35
UBFD1-201ENST00000395878 DEFB131BA0A096LNP1 70 aa12.88□□□□□ -0.35
UBFD1-201ENST00000395878 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
UBFD1-201ENST00000395878 C10orf99Q6UWK7 81 aa12.87□□□□□ -0.35
UBFD1-201ENST00000395878 TRAV23DV6A0A075B6W5 121 aa12.87□□□□□ -0.35
UBFD1-201ENST00000395878 TRIAP1O43715 76 aa12.87□□□□□ -0.35
UBFD1-201ENST00000395878 HILS1P60008 231 aa12.87□□□□□ -0.35
UBFD1-201ENST00000395878 ATP5EP2Q5VTU8 51 aa12.87□□□□□ -0.35
UBFD1-201ENST00000395878 NRACQ8N912 160 aa12.87□□□□□ -0.35
UBFD1-201ENST00000395878 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
UBFD1-201ENST00000395878 TIMM17BO60830 172 aa12.86□□□□□ -0.35
UBFD1-201ENST00000395878 RNASE3P12724 160 aaKnown RBP12.86□□□□□ -0.35
UBFD1-201ENST00000395878 ZNF702PQ9H963 129 aa12.86□□□□□ -0.35
UBFD1-201ENST00000395878 PROK1P58294 105 aa12.85□□□□□ -0.35
UBFD1-201ENST00000395878 PTPN13Q12923 2485 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms