RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 SERTAD4-AS1Q5TG53 156 aa7.11□□□□□ -1.27
CNIH1-202ENST00000395573 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
CNIH1-202ENST00000395573 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
CNIH1-202ENST00000395573 TMA7Q9Y2S6 64 aaKnown RBP7.11□□□□□ -1.27
CNIH1-202ENST00000395573 XKRY2A2RUG3 117 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 C19orf71A6NCJ1 209 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 P01737 135 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 TRGC1P0CF51 173 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 RASL11AQ6T310 242 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 CLRN3Q8NCR9 226 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 TMEM243Q9BU79 118 aa7.1□□□□□ -1.27
CNIH1-202ENST00000395573 TRAV1-1A0A0B4J248 108 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 hDV102S1A0JD36 115 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 F2Z2F3 143 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 IFNA1P01562 189 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 RAB5CP51148 216 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 MEF2BQ02080 365 aaPredicted RBP7.09□□□□□ -1.27
CNIH1-202ENST00000395573 LYZL1Q6UWQ5 148 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 C20orf203Q8NBC4 194 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 SMIM12Q96EX1 92 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 DPH3P1Q9H4G8 78 aa7.09□□□□□ -1.27
CNIH1-202ENST00000395573 HMCN2Q8NDA2 5059 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 IGLV4-60A0A075B6I1 120 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 TRAV8-4A0A0B4J246 113 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 PANO1I0J062 215 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 UBE2L6O14933 153 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 PDE6DO43924 150 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 EIF5AL1Q6IS14 154 aaKnown RBP7.08□□□□□ -1.28
CNIH1-202ENST00000395573 PGLYRP4Q96LB8 373 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 NIT2Q9NQR4 276 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 BIN3Q9NQY0 253 aa7.08□□□□□ -1.28
CNIH1-202ENST00000395573 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 A0A1B0GUV1 79 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 NTF3P20783 257 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 SULT1A2P50226 295 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
CNIH1-202ENST00000395573 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
CNIH1-202ENST00000395573 COTL1Q14019 142 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 ANKRD39Q53RE8 183 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 SDIM1Q6ZPB5 146 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 GFRA4Q9GZZ7 299 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 MED9Q9NWA0 146 aa7.07□□□□□ -1.28
CNIH1-202ENST00000395573 IGHV3-64A0A075B6Q5 118 aa7.06□□□□□ -1.28
CNIH1-202ENST00000395573 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.06□□□□□ -1.28
CNIH1-202ENST00000395573 BCL2P10415 239 aa7.06□□□□□ -1.28
CNIH1-202ENST00000395573 CTRLP40313 264 aa7.06□□□□□ -1.28
CNIH1-202ENST00000395573 AMTP48728 403 aa7.06□□□□□ -1.28
CNIH1-202ENST00000395573 WDR73Q6P4I2 378 aa7.06□□□□□ -1.28
CNIH1-202ENST00000395573 TWIST1Q15672 202 aa7.05□□□□□ -1.28
CNIH1-202ENST00000395573 C9orf62Q8N4C0 152 aa7.05□□□□□ -1.28
CNIH1-202ENST00000395573 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
CNIH1-202ENST00000395573 DPH3Q96FX2 82 aa7.05□□□□□ -1.28
CNIH1-202ENST00000395573 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
CNIH1-202ENST00000395573 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
CNIH1-202ENST00000395573 IGKV3OR2-268A0A0C4DH90 116 aa7.04□□□□□ -1.28
CNIH1-202ENST00000395573 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
CNIH1-202ENST00000395573 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
CNIH1-202ENST00000395573 RPP21Q9H633 154 aaKnown RBP7.04□□□□□ -1.28
CNIH1-202ENST00000395573 PLA2G2DQ9UNK4 145 aa7.04□□□□□ -1.28
CNIH1-202ENST00000395573 TRAV26-2A0A0B4J265 109 aa7.03□□□□□ -1.28
CNIH1-202ENST00000395573 SLPIP03973 132 aa7.03□□□□□ -1.28
CNIH1-202ENST00000395573 CHTF8P0CG12 524 aa7.03□□□□□ -1.28
CNIH1-202ENST00000395573 GATD1Q8NB37 220 aa7.03□□□□□ -1.28
CNIH1-202ENST00000395573 RNF185Q96GF1 192 aa7.03□□□□□ -1.28
CNIH1-202ENST00000395573 RNASE7Q9H1E1 156 aaKnown RBP7.03□□□□□ -1.28
CNIH1-202ENST00000395573 A0A087WYN8 130 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 GAGE12HA6NDE8 117 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 K7EN84 100 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 TAGLN2P37802 199 aaKnown RBP7.02□□□□□ -1.29
CNIH1-202ENST00000395573 AMMECR1LQ6DCA0 310 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 CFAP161Q6P656 301 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 SMIM15Q7Z3B0 74 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 SLC51BQ86UW2 128 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 C15orf56Q8N910 161 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 SPACA4Q8TDM5 124 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 CNFNQ9BYD5 112 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 KRTAP4-2Q9BYR5 136 aa7.02□□□□□ -1.29
CNIH1-202ENST00000395573 APCSP02743 223 aa7.01□□□□□ -1.29
CNIH1-202ENST00000395573 HIGD2BQ4VC39 106 aa7.01□□□□□ -1.29
CNIH1-202ENST00000395573 RNASEKQ6P5S7 137 aaKnown RBP7.01□□□□□ -1.29
CNIH1-202ENST00000395573 Q6ZNX1 250 aa7.01□□□□□ -1.29
CNIH1-202ENST00000395573 OCC1Q8TAD7 63 aa7.01□□□□□ -1.29
CNIH1-202ENST00000395573 RPL39LQ96EH5 51 aaKnown RBP7.01□□□□□ -1.29
CNIH1-202ENST00000395573 TNXBP22105 4242 aa7□□□□□ -1.29
CNIH1-202ENST00000395573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7□□□□□ -1.29
CNIH1-202ENST00000395573 IGKV2-29A2NJV5 120 aaPredicted RBP7□□□□□ -1.29
CNIH1-202ENST00000395573 NCR2O95944 276 aa7□□□□□ -1.29
CNIH1-202ENST00000395573 RPS10P46783 165 aaKnown RBP7□□□□□ -1.29
CNIH1-202ENST00000395573 Q6ZRU5 148 aa7□□□□□ -1.29
CNIH1-202ENST00000395573 TCTE3Q8IZS6 198 aa7□□□□□ -1.29
CNIH1-202ENST00000395573 CHCHD10Q8WYQ3 142 aaPredicted RBP7□□□□□ -1.29
CNIH1-202ENST00000395573 SDHAF1A6NFY7 115 aa6.99□□□□□ -1.29
CNIH1-202ENST00000395573 GATCO43716 136 aaKnown RBP6.99□□□□□ -1.29
CNIH1-202ENST00000395573 FOXA3P55318 350 aaPredicted RBP6.99□□□□□ -1.29
CNIH1-202ENST00000395573 COX6A2Q02221 97 aa6.99□□□□□ -1.29
CNIH1-202ENST00000395573 TEX261Q6UWH6 196 aa6.99□□□□□ -1.29
CNIH1-202ENST00000395573 C7orf33Q8WU49 177 aa6.99□□□□□ -1.29
CNIH1-202ENST00000395573 GTSF1Q8WW33 167 aa6.99□□□□□ -1.29
CNIH1-202ENST00000395573 IGKV2-24A0A0C4DH68 120 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms