RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 C18orf65Q6ZTR6 163 aa15.45■□□□□ 0.06
COL23A1-201ENST00000390654 IGHV3-38A0A0C4DH36 116 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 K7EQG2 157 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 CD28P10747 220 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 TRBV6-5A0A0K0K1A5 114 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 I3L3M4 83 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 CIDEAO60543 219 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 Q6ZSV7 163 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 TEN1Q86WV5 123 aa15.44■□□□□ 0.06
COL23A1-201ENST00000390654 CLUHP3Q96NS8 147 aa15.43■□□□□ 0.06
COL23A1-201ENST00000390654 A0A1B0GV72 72 aa15.42■□□□□ 0.06
COL23A1-201ENST00000390654 USP24Q9UPU5 2620 aa15.42■□□□□ 0.06
COL23A1-201ENST00000390654 LEPROTO15243 131 aa15.42■□□□□ 0.06
COL23A1-201ENST00000390654 LYRM7Q5U5X0 104 aa15.42■□□□□ 0.06
COL23A1-201ENST00000390654 PPDPFLQ8WWR9 84 aa15.42■□□□□ 0.06
COL23A1-201ENST00000390654 ERG28Q9UKR5 140 aa15.42■□□□□ 0.06
COL23A1-201ENST00000390654 SCGB1A1P11684 91 aa15.41■□□□□ 0.06
COL23A1-201ENST00000390654 HOXD3P31249 432 aaPredicted RBP15.41■□□□□ 0.06
COL23A1-201ENST00000390654 DEFB131AP59861 70 aa15.41■□□□□ 0.06
COL23A1-201ENST00000390654 NSUN5P1Q3KNT7 163 aa15.41■□□□□ 0.06
COL23A1-201ENST00000390654 SLC25A20O43772 301 aa15.4■□□□□ 0.06
COL23A1-201ENST00000390654 Q6ZUT4 128 aa15.4■□□□□ 0.06
COL23A1-201ENST00000390654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.4■□□□□ 0.06
COL23A1-201ENST00000390654 IGKV2-29A2NJV5 120 aaPredicted RBP15.4■□□□□ 0.06
COL23A1-201ENST00000390654 BRI3O95415 125 aa15.4■□□□□ 0.06
COL23A1-201ENST00000390654 IGHV3-33P01772 117 aa15.4■□□□□ 0.06
COL23A1-201ENST00000390654 IGHV3-30-3P0DP02 117 aa15.4■□□□□ 0.06
COL23A1-201ENST00000390654 SLURP1P55000 103 aa15.39■□□□□ 0.05
COL23A1-201ENST00000390654 Q6ZSN1 163 aa15.39■□□□□ 0.05
COL23A1-201ENST00000390654 C11orf44Q8N8P7 122 aa15.39■□□□□ 0.05
COL23A1-201ENST00000390654 RHOHQ15669 191 aa15.39■□□□□ 0.05
COL23A1-201ENST00000390654 DAND5Q8N907 189 aa15.39■□□□□ 0.05
COL23A1-201ENST00000390654 A0A0J9YXY3 114 aa15.38■□□□□ 0.05
COL23A1-201ENST00000390654 TCTEX1D4Q5JR98 221 aa15.38■□□□□ 0.05
COL23A1-201ENST00000390654 TMEM263Q8WUH6 116 aaKnown RBP15.38■□□□□ 0.05
COL23A1-201ENST00000390654 TRBV20-1A0A075B6N2 111 aa15.38■□□□□ 0.05
COL23A1-201ENST00000390654 TIMM21Q9BVV7 248 aa15.38■□□□□ 0.05
COL23A1-201ENST00000390654 ATP6V0E2Q8NHE4 81 aa15.37■□□□□ 0.05
COL23A1-201ENST00000390654 TNFRSF18Q9Y5U5 241 aa15.37■□□□□ 0.05
COL23A1-201ENST00000390654 ADAMTSL4-AS1Q5T5F5 129 aa15.37■□□□□ 0.05
COL23A1-201ENST00000390654 GEMIN7Q9H840 131 aaKnown RBP15.37■□□□□ 0.05
COL23A1-201ENST00000390654 A0A0U1RRA0 63 aa15.36■□□□□ 0.05
COL23A1-201ENST00000390654 CRYBA4P53673 196 aa15.36■□□□□ 0.05
COL23A1-201ENST00000390654 ZNF469Q96JG9 3925 aaPredicted RBP15.35■□□□□ 0.05
COL23A1-201ENST00000390654 NTN5Q8WTR8 489 aaPredicted RBP15.35■□□□□ 0.05
COL23A1-201ENST00000390654 FAM104AQ969W3 186 aa15.35■□□□□ 0.05
COL23A1-201ENST00000390654 TRAV26-1A0A087WT03 109 aa15.34■□□□□ 0.05
COL23A1-201ENST00000390654 KRTAP10-9P60411 292 aa15.33■□□□□ 0.05
COL23A1-201ENST00000390654 IGHV3OR16-12A0A075B7B8 117 aa15.33■□□□□ 0.04
COL23A1-201ENST00000390654 TRGV11A0A075B6L2 103 aa15.32■□□□□ 0.04
COL23A1-201ENST00000390654 RBMY1BA6NDE4 496 aaKnown RBP15.32■□□□□ 0.04
COL23A1-201ENST00000390654 RBMY1EA6NEQ0 496 aaKnown RBP15.32■□□□□ 0.04
COL23A1-201ENST00000390654 RBMY1DP0C7P1 496 aaKnown RBP15.32■□□□□ 0.04
COL23A1-201ENST00000390654 NDUFA12Q9UI09 145 aa15.32■□□□□ 0.04
COL23A1-201ENST00000390654 TEX49A0A1B0GTD5 131 aa15.32■□□□□ 0.04
COL23A1-201ENST00000390654 TRIAP1O43715 76 aa15.32■□□□□ 0.04
COL23A1-201ENST00000390654 LINC01356Q8N9X3 169 aa15.32■□□□□ 0.04
COL23A1-201ENST00000390654 ZNF625Q96I27 306 aaPredicted RBP15.32■□□□□ 0.04
COL23A1-201ENST00000390654 M0R2P5 195 aa15.31■□□□□ 0.04
COL23A1-201ENST00000390654 AKAP9Q99996 3911 aa15.31■□□□□ 0.04
COL23A1-201ENST00000390654 ODF3Q96PU9 254 aa15.3■□□□□ 0.04
COL23A1-201ENST00000390654 FLNAP21333 2647 aaKnown RBP15.29■□□□□ 0.04
COL23A1-201ENST00000390654 LINC00467Q9BRT7 94 aa15.29■□□□□ 0.04
COL23A1-201ENST00000390654 CLEC2BQ92478 149 aa15.29■□□□□ 0.04
COL23A1-201ENST00000390654 LINC01587Q99440 93 aa15.29■□□□□ 0.04
COL23A1-201ENST00000390654 SBSPONQ8IVN8 264 aa15.28■□□□□ 0.04
COL23A1-201ENST00000390654 TMEM61Q8N0U2 210 aa15.28■□□□□ 0.04
COL23A1-201ENST00000390654 LINC01620Q4KN68 170 aa15.28■□□□□ 0.04
COL23A1-201ENST00000390654 LITAFQ99732 161 aa15.28■□□□□ 0.04
COL23A1-201ENST00000390654 A0A0B4J2C4 111 aa15.27■□□□□ 0.04
COL23A1-201ENST00000390654 A0A1W2PRX2 142 aa15.27■□□□□ 0.04
COL23A1-201ENST00000390654 ITPR3Q14573 2671 aa15.27■□□□□ 0.03
COL23A1-201ENST00000390654 GATA3P23771 443 aa15.26■□□□□ 0.03
COL23A1-201ENST00000390654 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.26■□□□□ 0.03
COL23A1-201ENST00000390654 H3BMM0 161 aa15.26■□□□□ 0.03
COL23A1-201ENST00000390654 RNF183Q96D59 192 aa15.26■□□□□ 0.03
COL23A1-201ENST00000390654 IGHV1-58A0A0C4DH39 117 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 NDUFA7O95182 113 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 MRPS36P82909 103 aaKnown RBP15.25■□□□□ 0.03
COL23A1-201ENST00000390654 VPREB3Q9UKI3 123 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 FN1P02751 2386 aaKnown RBP15.25■□□□□ 0.03
COL23A1-201ENST00000390654 ATXN8Q156A1 80 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 CHCHD7Q9BUK0 85 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 CDKN2A-AS1Q9UH64 79 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 APCP25054 2843 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 XCL2Q9UBD3 114 aa15.25■□□□□ 0.03
COL23A1-201ENST00000390654 NBPF19A0A087WUL8 3843 aa15.24■□□□□ 0.03
COL23A1-201ENST00000390654 CRLF1O75462 422 aa15.24■□□□□ 0.03
COL23A1-201ENST00000390654 UBE2E2Q96LR5 201 aa15.24■□□□□ 0.03
COL23A1-201ENST00000390654 NOTCH2Q04721 2471 aa15.24■□□□□ 0.03
COL23A1-201ENST00000390654 ZNF702PQ9H963 129 aa15.24■□□□□ 0.03
COL23A1-201ENST00000390654 IGHV3-53P01767 116 aa15.23■□□□□ 0.03
COL23A1-201ENST00000390654 UBE2D4Q9Y2X8 147 aa15.23■□□□□ 0.03
COL23A1-201ENST00000390654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.23■□□□□ 0.03
COL23A1-201ENST00000390654 VSIG2Q96IQ7 327 aa15.23■□□□□ 0.03
COL23A1-201ENST00000390654 DGAT2L7PQ6IED9 249 aa15.23■□□□□ 0.03
COL23A1-201ENST00000390654 ICOSQ9Y6W8 199 aa15.22■□□□□ 0.03
COL23A1-201ENST00000390654 TRAV4A0A0B4J268 109 aa15.21■□□□□ 0.03
COL23A1-201ENST00000390654 BBC3Q96PG8 261 aaPredicted RBP15.21■□□□□ 0.03
COL23A1-201ENST00000390654 C2orf82Q6UX34 121 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms