RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SPTAN1Q13813 2472 aaKnown RBP2.53□□□□□ -2
TRAV39-201ENST00000390466 ATMQ13315 3056 aa2.53□□□□□ -2
TRAV39-201ENST00000390466 CR1P17927 2039 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 HRNRQ86YZ3 2850 aaPredicted RBP2.52□□□□□ -2.01
TRAV39-201ENST00000390466 AKAP6Q13023 2319 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 FLNBO75369 2602 aaKnown RBP2.52□□□□□ -2.01
TRAV39-201ENST00000390466 MGAQ8IWI9 3026 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 TRGV11A0A075B6L2 103 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 IGHV3OR16-10A0A075B7F0 116 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 TRAV8-3A0A0A6YYJ7 113 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 TRBV7-1A0A0A6YYK4 115 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 IGLV5-39A0A0G2JS06 123 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 F6UB75 175 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 G3V318 75 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 VCYO14598 125 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 NDUFA7O95182 113 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 IGHV4-39P01824 125 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 CLEC3BP05452 202 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 CD3EP07766 207 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 ARL3P36405 182 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 FBXL19-AS1Q494R0 122 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 LRRC75A-AS1Q8N1F1 130 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 Q8N3U1 123 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 C3orf22Q8N5N4 141 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 C3orf56Q8N813 242 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 C5orf56Q8N8D9 126 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 DAND5Q8N907 189 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 DUX3Q96PT4 197 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 CHCHD5Q9BSY4 110 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 KLK5Q9Y337 293 aaPredicted RBP2.52□□□□□ -2.01
TRAV39-201ENST00000390466 PYGO1Q9Y3Y4 419 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 PHLDA3Q9Y5J5 127 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 DCHS2Q6V1P9 2916 aa2.52□□□□□ -2.01
TRAV39-201ENST00000390466 CSMD1Q96PZ7 3565 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 IGHV1-58A0A0C4DH39 117 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 SMIM9A6NGZ8 99 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 FAM223BA6NKX1 122 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 A8MTW9 85 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 ADARB2-AS1A8MUL3 147 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 EPM2AB3EWF7 344 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 H7C2G1 150 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 J3QKU1 62 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 UQCRQO14949 82 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 NDUFA1O15239 70 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 SCGB2A1O75556 95 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 LY6HO94772 140 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 ATP5G1P05496 136 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 LINC00694P0DN24 101 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 CRYGAP11844 174 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 EDN2P20800 178 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 ZFP36P26651 326 aaKnown RBP2.51□□□□□ -2.01
TRAV39-201ENST00000390466 CXCL5P42830 114 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 RPS28P62857 69 aaKnown RBP2.51□□□□□ -2.01
TRAV39-201ENST00000390466 HERVK_113P63121 156 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 HES1Q14469 280 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 ECSCRQ19T08 205 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 LINC00643Q86TS7 51 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 FAM223AQ8IWN6 122 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 Q8N2B8 174 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.51□□□□□ -2.01
TRAV39-201ENST00000390466 DEFB104AQ8WTQ1 72 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 EEF1AKMT3Q96AZ1 226 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 TMEM101Q96IK0 257 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 VSIG2Q96IQ7 327 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 C16orf92Q96LL3 132 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 OBSCN-AS1Q96MR7 158 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 CHCHD7Q9BUK0 85 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 TIMM21Q9BVV7 248 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 PRORYQ9H606 182 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 NDUFA12Q9UI09 145 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 UTP20O75691 2785 aaKnown RBP2.51□□□□□ -2.01
TRAV39-201ENST00000390466 PIEZO2Q9H5I5 2752 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 CSPG4Q6UVK1 2322 aa2.51□□□□□ -2.01
TRAV39-201ENST00000390466 IGHV3-64A0A075B6Q5 118 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 A0A087WWL8 130 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 LOC107984640A0A0U1RRK4 108 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 TINCRA0A1B0GVN0 87 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 A8MZ25 164 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 J3KRW8 73 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 NDUFA4O00483 81 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 COX7A2LO14548 114 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 NPFFO15130 113 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 TRACP01848 142 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 ACYP1P07311 99 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 RBMY1A1P0DJD3 496 aaKnown RBP2.5□□□□□ -2.01
TRAV39-201ENST00000390466 RBMY1CP0DJD4 496 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 COX7CP15954 63 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 ATP5J2P56134 94 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 CFHR3Q02985 330 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 RBMY1FQ15415 496 aaKnown RBP2.5□□□□□ -2.01
TRAV39-201ENST00000390466 ZNF56Q15929 161 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 C5orf47Q569G3 176 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 Q5XG85 94 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 FAM19A3Q7Z5A8 133 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 LINC00528Q8N1L1 170 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 FAM218AQ96MZ4 157 aa2.5□□□□□ -2.01
TRAV39-201ENST00000390466 BEX4Q9NWD9 120 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms