RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 ZNF843Q8N446 348 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 FAM222AQ5U5X8 452 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 Q6ZSV7 163 aa11.25□□□□□ -0.61
SNPH-202ENST00000381873 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
SNPH-202ENST00000381873 H3BQ85 93 aa11.24□□□□□ -0.61
SNPH-202ENST00000381873 FRMD6-AS1P0C7T7 363 aa11.24□□□□□ -0.61
SNPH-202ENST00000381873 ODF1Q14990 250 aa11.24□□□□□ -0.61
SNPH-202ENST00000381873 TDRG1Q3Y452 100 aa11.24□□□□□ -0.61
SNPH-202ENST00000381873 Q6ZPA2 131 aa11.24□□□□□ -0.61
SNPH-202ENST00000381873 FXYD2P54710 66 aa11.23□□□□□ -0.61
SNPH-202ENST00000381873 LINC01620Q4KN68 170 aa11.23□□□□□ -0.61
SNPH-202ENST00000381873 DIRC1Q969H9 104 aa11.23□□□□□ -0.61
SNPH-202ENST00000381873 NREPQ16612 68 aa11.23□□□□□ -0.61
SNPH-202ENST00000381873 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
SNPH-202ENST00000381873 LECT2O14960 151 aa11.23□□□□□ -0.61
SNPH-202ENST00000381873 LYRM9A8MSI8 78 aa11.22□□□□□ -0.61
SNPH-202ENST00000381873 NCR3O14931 201 aa11.22□□□□□ -0.61
SNPH-202ENST00000381873 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.61
SNPH-202ENST00000381873 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
SNPH-202ENST00000381873 Q6ZUT4 128 aa11.21□□□□□ -0.61
SNPH-202ENST00000381873 C14orf177Q52M58 125 aa11.21□□□□□ -0.62
SNPH-202ENST00000381873 JMJD7-PLA2G4BH0Y9G9 81 aa11.2□□□□□ -0.62
SNPH-202ENST00000381873 TP53TG3Q9ULZ0 132 aa11.2□□□□□ -0.62
SNPH-202ENST00000381873 LY6LH3BQJ8 138 aa11.2□□□□□ -0.62
SNPH-202ENST00000381873 CRYGBP07316 175 aa11.2□□□□□ -0.62
SNPH-202ENST00000381873 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
SNPH-202ENST00000381873 ANKRD11Q6UB99 2663 aaPredicted RBP11.2□□□□□ -0.62
SNPH-202ENST00000381873 TNRC6AQ8NDV7 1962 aaKnown RBP11.19□□□□□ -0.62
SNPH-202ENST00000381873 P0DMU3 169 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 FAM231AP0DMU4 169 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 FAM231CP0DMU5 169 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 WDR87Q6ZQQ6 2873 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 DEFB131BA0A096LNP1 70 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 MLST8Q9BVC4 326 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 FASNP49327 2511 aaKnown RBP11.19□□□□□ -0.62
SNPH-202ENST00000381873 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
SNPH-202ENST00000381873 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
SNPH-202ENST00000381873 HILS1P60008 231 aa11.18□□□□□ -0.62
SNPH-202ENST00000381873 TEN1Q86WV5 123 aa11.18□□□□□ -0.62
SNPH-202ENST00000381873 PKD1L2Q7Z442 2459 aa11.18□□□□□ -0.62
SNPH-202ENST00000381873 REG3AQ06141 175 aa11.18□□□□□ -0.62
SNPH-202ENST00000381873 IGLV2-8P01709 118 aa11.18□□□□□ -0.62
SNPH-202ENST00000381873 UFSP1Q6NVU6 142 aa11.18□□□□□ -0.62
SNPH-202ENST00000381873 COL4A2P08572 1712 aa11.17□□□□□ -0.62
SNPH-202ENST00000381873 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
SNPH-202ENST00000381873 SPATA25Q9BR10 227 aa11.17□□□□□ -0.62
SNPH-202ENST00000381873 RBM3P98179 157 aaKnown RBP11.17□□□□□ -0.62
SNPH-202ENST00000381873 ZFAND2AQ8N6M9 145 aa11.17□□□□□ -0.62
SNPH-202ENST00000381873 RNF183Q96D59 192 aa11.17□□□□□ -0.62
SNPH-202ENST00000381873 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
SNPH-202ENST00000381873 DNAH12Q6ZR08 3092 aa11.17□□□□□ -0.62
SNPH-202ENST00000381873 EIF4EBP1Q13541 118 aaPredicted RBP11.17□□□□□ -0.62
SNPH-202ENST00000381873 MIFP14174 115 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 SPATA12Q7Z6I5 190 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 ZNF295-AS1Q8N0V1 137 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 A0A0B4J2C4 111 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 A0A1B0GX51 115 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 MP68P56378 58 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 LINC00482Q8N8I6 264 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 PSMG3-AS1Q96PY0 264 aa11.15□□□□□ -0.62
SNPH-202ENST00000381873 LY6G6DO95868 133 aa11.14□□□□□ -0.63
SNPH-202ENST00000381873 H3BT86 120 aa11.14□□□□□ -0.63
SNPH-202ENST00000381873 IGKV3D-7A0A0C4DH55 119 aa11.14□□□□□ -0.63
SNPH-202ENST00000381873 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
SNPH-202ENST00000381873 COX7BP24311 80 aa11.14□□□□□ -0.63
SNPH-202ENST00000381873 LINC01006Q8NI28 216 aa11.14□□□□□ -0.63
SNPH-202ENST00000381873 CHCHD10Q8WYQ3 142 aaPredicted RBP11.13□□□□□ -0.63
SNPH-202ENST00000381873 TMEM256-PLSCR3K7ERE1 68 aa11.13□□□□□ -0.63
SNPH-202ENST00000381873 CRYGDP07320 174 aa11.13□□□□□ -0.63
SNPH-202ENST00000381873 WFDC2Q14508 124 aa11.13□□□□□ -0.63
SNPH-202ENST00000381873 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
SNPH-202ENST00000381873 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
SNPH-202ENST00000381873 TRBV10-2A0A0K0K1G8 114 aa11.12□□□□□ -0.63
SNPH-202ENST00000381873 PSMB8P28062 276 aa11.12□□□□□ -0.63
SNPH-202ENST00000381873 CLEC2BQ92478 149 aa11.12□□□□□ -0.63
SNPH-202ENST00000381873 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
SNPH-202ENST00000381873 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
SNPH-202ENST00000381873 UTRNP46939 3433 aa11.12□□□□□ -0.63
SNPH-202ENST00000381873 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
SNPH-202ENST00000381873 MIAQ16674 131 aa11.11□□□□□ -0.63
SNPH-202ENST00000381873 PDE6GP18545 87 aa11.11□□□□□ -0.63
SNPH-202ENST00000381873 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
SNPH-202ENST00000381873 CPAMD8Q8IZJ3 1885 aa11.11□□□□□ -0.63
SNPH-202ENST00000381873 TMEM258P61165 79 aa11.11□□□□□ -0.63
SNPH-202ENST00000381873 NFE4Q86UQ8 179 aa11.1□□□□□ -0.63
SNPH-202ENST00000381873 TRBV6-4A0A1B0GX49 114 aa11.1□□□□□ -0.63
SNPH-202ENST00000381873 H7C423 109 aa11.1□□□□□ -0.63
SNPH-202ENST00000381873 MBD6Q96DN6 1003 aa11.1□□□□□ -0.63
SNPH-202ENST00000381873 SPTBN4Q9H254 2564 aa11.1□□□□□ -0.63
SNPH-202ENST00000381873 ZNF702PQ9H963 129 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms