RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 MBD3L1Q8WWY6 194 aa4.41□□□□□ -1.7
TTC39B-203ENST00000380853 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.7
TTC39B-203ENST00000380853 IFNA1P01562 189 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 TRGC1P0CF51 173 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 GNG4P50150 75 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 CACNG7P62955 275 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 EIF5AL1Q6IS14 154 aaKnown RBP4.4□□□□□ -1.71
TTC39B-203ENST00000380853 WDR73Q6P4I2 378 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 TMUB2Q71RG4 321 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 LINC00269Q8N2A0 174 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 TMEM243Q9BU79 118 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 BIN3Q9NQY0 253 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 VAX2Q9UIW0 290 aa4.4□□□□□ -1.71
TTC39B-203ENST00000380853 IGLV10-54A0A075B6I4 117 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 GAGE12HA6NDE8 117 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 HMSDA8MTL9 139 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 P01737 135 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 GZMBP10144 247 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 S100A1P23297 94 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 AMTP48728 403 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 SULT1A2P50226 295 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 NKX2-5P52952 324 aaPredicted RBP4.39□□□□□ -1.71
TTC39B-203ENST00000380853 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
TTC39B-203ENST00000380853 REG3AQ06141 175 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 IQCJQ1A5X6 159 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 SUMO4Q6EEV6 95 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 C11orf52Q96A22 123 aa4.39□□□□□ -1.71
TTC39B-203ENST00000380853 ABCA13Q86UQ4 5058 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.38□□□□□ -1.71
TTC39B-203ENST00000380853 F2Z2F3 143 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 OXTP01178 125 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 PRSS1P07477 247 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 RAB5CP51148 216 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 COTL1Q14019 142 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 NDUFA5Q16718 116 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 DGAT2L7PQ6IED9 249 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 RASL11AQ6T310 242 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 NTM-AS1Q6ZSK4 140 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 SMIM12Q96EX1 92 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 DPH3Q96FX2 82 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 DPH3P1Q9H4G8 78 aa4.38□□□□□ -1.71
TTC39B-203ENST00000380853 TRAV8-4A0A0B4J246 113 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 IGKV3OR2-268A0A0C4DH90 116 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 B5MCH6 92 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 M0QY20 66 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 PDE6DO43924 150 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 IGLC6P0CF74 106 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 CCL20P78556 96 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 MEF2BQ02080 365 aaPredicted RBP4.37□□□□□ -1.71
TTC39B-203ENST00000380853 SERTAD4-AS1Q5TG53 156 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 SMIM15Q7Z3B0 74 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 C9orf163Q8N9P6 203 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 PRR34Q9NV39 138 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 MED9Q9NWA0 146 aa4.37□□□□□ -1.71
TTC39B-203ENST00000380853 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
TTC39B-203ENST00000380853 IGHV3-64A0A075B6Q5 118 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 RAB19A4D1S5 217 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 ATP6V1G1O75348 118 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 BCL2P10415 239 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 TWIST1Q15672 202 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 LYZL1Q6UWQ5 148 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 Q6ZNX1 250 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 NIT2Q9NQR4 276 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 KIF25-AS1Q9Y6Z4 181 aa4.36□□□□□ -1.71
TTC39B-203ENST00000380853 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 TRAV1-1A0A0B4J248 108 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 C19orf71A6NCJ1 209 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 APCSP02743 223 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 TAGLN2P37802 199 aaKnown RBP4.35□□□□□ -1.71
TTC39B-203ENST00000380853 CTRLP40313 264 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 RNASEKQ6P5S7 137 aaKnown RBP4.35□□□□□ -1.71
TTC39B-203ENST00000380853 CFAP161Q6P656 301 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
TTC39B-203ENST00000380853 C20orf203Q8NBC4 194 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 BORCS7Q96B45 105 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 PGLYRP4Q96LB8 373 aa4.35□□□□□ -1.71
TTC39B-203ENST00000380853 RPP21Q9H633 154 aaKnown RBP4.35□□□□□ -1.71
TTC39B-203ENST00000380853 A0A1B0GUV1 79 aa4.34□□□□□ -1.71
TTC39B-203ENST00000380853 NTF3P20783 257 aa4.34□□□□□ -1.71
TTC39B-203ENST00000380853 CNBPP62633 177 aaKnown RBP4.34□□□□□ -1.71
TTC39B-203ENST00000380853 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
TTC39B-203ENST00000380853 KRTAP26-1Q6PEX3 210 aa4.34□□□□□ -1.71
TTC39B-203ENST00000380853 C7orf33Q8WU49 177 aa4.34□□□□□ -1.71
TTC39B-203ENST00000380853 DNAH5Q8TE73 4624 aa4.34□□□□□ -1.72
TTC39B-203ENST00000380853 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
TTC39B-203ENST00000380853 CHTF8P0CG12 524 aa4.33□□□□□ -1.72
TTC39B-203ENST00000380853 KRTAP10-4P60372 401 aaPredicted RBP4.33□□□□□ -1.72
TTC39B-203ENST00000380853 HIGD2BQ4VC39 106 aa4.33□□□□□ -1.72
TTC39B-203ENST00000380853 RNF185Q96GF1 192 aa4.33□□□□□ -1.72
TTC39B-203ENST00000380853 BTF3L4Q96K17 158 aa4.33□□□□□ -1.72
TTC39B-203ENST00000380853 GFRA4Q9GZZ7 299 aa4.33□□□□□ -1.72
TTC39B-203ENST00000380853 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
TTC39B-203ENST00000380853 TRBV20OR9-2A0A075B6H5 130 aa4.32□□□□□ -1.72
TTC39B-203ENST00000380853 IGKV2-24A0A0C4DH68 120 aa4.32□□□□□ -1.72
TTC39B-203ENST00000380853 A0A1B0GVG6 124 aa4.32□□□□□ -1.72
TTC39B-203ENST00000380853 PANO1I0J062 215 aa4.32□□□□□ -1.72
TTC39B-203ENST00000380853 GATCO43716 136 aaKnown RBP4.32□□□□□ -1.72
TTC39B-203ENST00000380853 NCR2O95944 276 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 428.8 ms