RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 P0DMU3 169 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 FAM231AP0DMU4 169 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 FAM231CP0DMU5 169 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 PTH2Q96A98 100 aa12.1□□□□□ -0.47
COL2A1-202ENST00000380518 MED12LQ86YW9 2145 aa12.09□□□□□ -0.47
COL2A1-202ENST00000380518 G3V4G9 280 aa12.09□□□□□ -0.47
COL2A1-202ENST00000380518 HIVEP3Q5T1R4 2406 aa12.09□□□□□ -0.47
COL2A1-202ENST00000380518 PLXNB1O43157 2135 aa12.08□□□□□ -0.47
COL2A1-202ENST00000380518 LRRC75A-AS1Q8N1F1 130 aa12.08□□□□□ -0.48
COL2A1-202ENST00000380518 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
COL2A1-202ENST00000380518 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
COL2A1-202ENST00000380518 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
COL2A1-202ENST00000380518 NEXN-AS1Q8NBZ9 246 aa12.08□□□□□ -0.48
COL2A1-202ENST00000380518 C2orf16Q68DN1 1984 aa12.08□□□□□ -0.48
COL2A1-202ENST00000380518 TCL1BO95988 128 aa12.07□□□□□ -0.48
COL2A1-202ENST00000380518 COX7BP24311 80 aa12.07□□□□□ -0.48
COL2A1-202ENST00000380518 Q6YL49 198 aa12.07□□□□□ -0.48
COL2A1-202ENST00000380518 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
COL2A1-202ENST00000380518 C19orf84I3L1E1 186 aa12.07□□□□□ -0.48
COL2A1-202ENST00000380518 UFSP1Q6NVU6 142 aa12.07□□□□□ -0.48
COL2A1-202ENST00000380518 LY6LH3BQJ8 138 aa12.06□□□□□ -0.48
COL2A1-202ENST00000380518 DEFB114Q30KQ6 69 aa12.06□□□□□ -0.48
COL2A1-202ENST00000380518 ZFAND3Q9H8U3 227 aa12.06□□□□□ -0.48
COL2A1-202ENST00000380518 LINC00643Q86TS7 51 aa12.06□□□□□ -0.48
COL2A1-202ENST00000380518 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
COL2A1-202ENST00000380518 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
COL2A1-202ENST00000380518 C5orf47Q569G3 176 aa12.05□□□□□ -0.48
COL2A1-202ENST00000380518 WFDC9Q8NEX5 89 aa12.05□□□□□ -0.48
COL2A1-202ENST00000380518 C20orf173Q96LM9 149 aa12.05□□□□□ -0.48
COL2A1-202ENST00000380518 MYO9AB2RTY4 2548 aa12.05□□□□□ -0.48
COL2A1-202ENST00000380518 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
COL2A1-202ENST00000380518 LINC00467Q9BRT7 94 aa12.04□□□□□ -0.48
COL2A1-202ENST00000380518 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
COL2A1-202ENST00000380518 REG3AQ06141 175 aa12.04□□□□□ -0.48
COL2A1-202ENST00000380518 LINC00269Q8N2A0 174 aa12.04□□□□□ -0.48
COL2A1-202ENST00000380518 ABCA2Q9BZC7 2435 aa12.04□□□□□ -0.48
COL2A1-202ENST00000380518 ADAMTS9Q9P2N4 1935 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 C14orf132Q9NPU4 83 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 LYRM9A8MSI8 78 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 IGHV4-31P0DP07 118 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
COL2A1-202ENST00000380518 CRIP1P50238 77 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 FAM222AQ5U5X8 452 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 IGLV4-3A0A075B6K6 122 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 CHKB-CPT1BH3BT56 60 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 PRORYQ9H606 182 aa12.03□□□□□ -0.48
COL2A1-202ENST00000380518 H7C423 109 aa12.02□□□□□ -0.48
COL2A1-202ENST00000380518 DENND4AQ7Z401 1863 aa12.02□□□□□ -0.48
COL2A1-202ENST00000380518 DOPEY1Q5JWR5 2465 aa12.02□□□□□ -0.49
COL2A1-202ENST00000380518 TMEM131Q92545 1883 aa12.02□□□□□ -0.49
COL2A1-202ENST00000380518 C11orf45Q8TAV5 145 aa12.01□□□□□ -0.49
COL2A1-202ENST00000380518 PCDH15Q96QU1 1955 aa12.01□□□□□ -0.49
COL2A1-202ENST00000380518 J3KT08 172 aa12.01□□□□□ -0.49
COL2A1-202ENST00000380518 M0QY20 66 aa12.01□□□□□ -0.49
COL2A1-202ENST00000380518 TMEM223A0PJW6 202 aa12□□□□□ -0.49
COL2A1-202ENST00000380518 NCOR2Q9Y618 2525 aa12□□□□□ -0.49
COL2A1-202ENST00000380518 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
COL2A1-202ENST00000380518 SPANXB1Q9NS25 103 aaPredicted RBP12□□□□□ -0.49
COL2A1-202ENST00000380518 U3KQK5 164 aa12□□□□□ -0.49
COL2A1-202ENST00000380518 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
COL2A1-202ENST00000380518 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
COL2A1-202ENST00000380518 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
COL2A1-202ENST00000380518 LTBP2Q14767 1821 aa11.98□□□□□ -0.49
COL2A1-202ENST00000380518 C14orf177Q52M58 125 aa11.98□□□□□ -0.49
COL2A1-202ENST00000380518 C11orf71Q6IPW1 123 aa11.98□□□□□ -0.49
COL2A1-202ENST00000380518 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
COL2A1-202ENST00000380518 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
COL2A1-202ENST00000380518 CFAP126Q5VTH2 177 aa11.98□□□□□ -0.49
COL2A1-202ENST00000380518 WFDC11Q8NEX6 87 aa11.98□□□□□ -0.49
COL2A1-202ENST00000380518 PRB2P02812 416 aaPredicted RBP11.98□□□□□ -0.49
COL2A1-202ENST00000380518 ZNF106Q9H2Y7 1883 aaKnown RBP11.97□□□□□ -0.49
COL2A1-202ENST00000380518 LINC00308Q8TCZ7 52 aa11.97□□□□□ -0.49
COL2A1-202ENST00000380518 TRBV27A0A0K0K1C4 114 aa11.97□□□□□ -0.49
COL2A1-202ENST00000380518 IGLV2-11P01706 119 aa11.97□□□□□ -0.49
COL2A1-202ENST00000380518 BPY2O14599 106 aa11.96□□□□□ -0.49
COL2A1-202ENST00000380518 PCNX3Q9H6A9 2034 aa11.96□□□□□ -0.49
COL2A1-202ENST00000380518 DSCAMO60469 2012 aa11.96□□□□□ -0.49
COL2A1-202ENST00000380518 IGKV2-24A0A0C4DH68 120 aa11.96□□□□□ -0.49
COL2A1-202ENST00000380518 B9D2Q9BPU9 175 aa11.96□□□□□ -0.49
COL2A1-202ENST00000380518 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.5
COL2A1-202ENST00000380518 Q6ZSV7 163 aa11.96□□□□□ -0.5
COL2A1-202ENST00000380518 TRBV6-5A0A0K0K1A5 114 aa11.96□□□□□ -0.5
COL2A1-202ENST00000380518 MAPKAPK5-AS1Q8N8E1 139 aa11.96□□□□□ -0.5
COL2A1-202ENST00000380518 ALPK3Q96L96 1907 aa11.95□□□□□ -0.5
COL2A1-202ENST00000380518 TRBV6-8A0A0A6YYG3 113 aa11.95□□□□□ -0.5
COL2A1-202ENST00000380518 TP73-AS1Q9UF72 201 aa11.95□□□□□ -0.5
COL2A1-202ENST00000380518 TEX49A0A1B0GTD5 131 aa11.95□□□□□ -0.5
COL2A1-202ENST00000380518 IL17DQ8TAD2 202 aa11.95□□□□□ -0.5
COL2A1-202ENST00000380518 HIGD2AQ9BW72 106 aa11.95□□□□□ -0.5
COL2A1-202ENST00000380518 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
COL2A1-202ENST00000380518 H0Y9J4 135 aa11.94□□□□□ -0.5
COL2A1-202ENST00000380518 PIEZO2Q9H5I5 2752 aa11.94□□□□□ -0.5
COL2A1-202ENST00000380518 IGF2RP11717 2491 aa11.94□□□□□ -0.5
COL2A1-202ENST00000380518 Q8N6K4 173 aa11.94□□□□□ -0.5
COL2A1-202ENST00000380518 FAM110AQ9BQ89 295 aa11.94□□□□□ -0.5
COL2A1-202ENST00000380518 NDUFC2O95298 119 aa11.93□□□□□ -0.5
COL2A1-202ENST00000380518 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
COL2A1-202ENST00000380518 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
COL2A1-202ENST00000380518 C10orf99Q6UWK7 81 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms