RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
SMAD9-202ENST00000379826 U3KQE9 123 aa8.48□□□□□ -1.05
SMAD9-202ENST00000379826 COL6A3P12111 3177 aa8.48□□□□□ -1.05
SMAD9-202ENST00000379826 LINC01546A6NGU7 62 aa8.48□□□□□ -1.05
SMAD9-202ENST00000379826 M0QY20 66 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 RS1O15537 224 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 DEFB130BP0DP73 79 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 DEFB130AP0DP74 79 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 GAGE6Q13070 117 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 PAX4O43316 350 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 ELANEP08246 267 aa8.47□□□□□ -1.05
SMAD9-202ENST00000379826 IGLV4-3A0A075B6K6 122 aa8.46□□□□□ -1.05
SMAD9-202ENST00000379826 CRIP2P52943 208 aaPredicted RBP8.46□□□□□ -1.05
SMAD9-202ENST00000379826 DOPEY2Q9Y3R5 2298 aa8.46□□□□□ -1.05
SMAD9-202ENST00000379826 LGALS9O00182 355 aa8.46□□□□□ -1.05
SMAD9-202ENST00000379826 PFN2P35080 140 aa8.46□□□□□ -1.05
SMAD9-202ENST00000379826 TRBV10-2A0A0K0K1G8 114 aa8.46□□□□□ -1.06
SMAD9-202ENST00000379826 RBMY1BA6NDE4 496 aaKnown RBP8.46□□□□□ -1.06
SMAD9-202ENST00000379826 RBMY1EA6NEQ0 496 aaKnown RBP8.46□□□□□ -1.06
SMAD9-202ENST00000379826 RBMY1DP0C7P1 496 aaKnown RBP8.46□□□□□ -1.06
SMAD9-202ENST00000379826 RBMY1A1P0DJD3 496 aaKnown RBP8.46□□□□□ -1.06
SMAD9-202ENST00000379826 RBMY1CP0DJD4 496 aa8.46□□□□□ -1.06
SMAD9-202ENST00000379826 TMEM86BQ8N661 226 aa8.46□□□□□ -1.06
SMAD9-202ENST00000379826 A0A1W2PPR1 153 aa8.46□□□□□ -1.06
SMAD9-202ENST00000379826 ZNF580Q9UK33 172 aa8.46□□□□□ -1.06
SMAD9-202ENST00000379826 TRIAP1O43715 76 aa8.46□□□□□ -1.06
SMAD9-202ENST00000379826 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 TSHBP01222 138 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 KRTAP10-9P60411 292 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 IGIPA6NJ69 53 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 LY6G6CO95867 125 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 COL27A1Q8IZC6 1860 aaPredicted RBP8.45□□□□□ -1.06
SMAD9-202ENST00000379826 GAGE7O76087 117 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 GAGE12FP0CL80 117 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 GAGE12GP0CL81 117 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 GAGE12IP0CL82 117 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 EDA2RQ9HAV5 297 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 K7EMT4 169 aa8.45□□□□□ -1.06
SMAD9-202ENST00000379826 DMDP11532 3685 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 A0A0B4J2C4 111 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 WDFY4Q6ZS81 3184 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
SMAD9-202ENST00000379826 HERVK_113P63121 156 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 CRYGDP07320 174 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 ANKHD1Q8IWZ3 2542 aaKnown RBP8.44□□□□□ -1.06
SMAD9-202ENST00000379826 FRYQ5TBA9 3013 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 TMEM263Q8WUH6 116 aaKnown RBP8.44□□□□□ -1.06
SMAD9-202ENST00000379826 SPANXA1Q9NS26 97 aa8.44□□□□□ -1.06
SMAD9-202ENST00000379826 Q6ZSV7 163 aa8.43□□□□□ -1.06
SMAD9-202ENST00000379826 TRBV27A0A0K0K1C4 114 aa8.43□□□□□ -1.06
SMAD9-202ENST00000379826 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
SMAD9-202ENST00000379826 NOP10Q9NPE3 64 aaKnown RBP8.43□□□□□ -1.06
SMAD9-202ENST00000379826 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
SMAD9-202ENST00000379826 KLLNB2CW77 178 aa8.42□□□□□ -1.06
SMAD9-202ENST00000379826 BAALC-AS2P0C853 105 aa8.42□□□□□ -1.06
SMAD9-202ENST00000379826 MIAQ16674 131 aa8.42□□□□□ -1.06
SMAD9-202ENST00000379826 CITED2Q99967 270 aaPredicted RBP8.42□□□□□ -1.06
SMAD9-202ENST00000379826 C9orf153Q5TBE3 101 aa8.42□□□□□ -1.06
SMAD9-202ENST00000379826 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
SMAD9-202ENST00000379826 SOCS3O14543 225 aa8.42□□□□□ -1.06
SMAD9-202ENST00000379826 PRB2P02812 416 aaPredicted RBP8.41□□□□□ -1.06
SMAD9-202ENST00000379826 UBE2D1P51668 147 aa8.41□□□□□ -1.06
SMAD9-202ENST00000379826 CLPSL2Q6UWE3 100 aa8.41□□□□□ -1.06
SMAD9-202ENST00000379826 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
SMAD9-202ENST00000379826 MALP21145 153 aa8.41□□□□□ -1.06
SMAD9-202ENST00000379826 CCL18P55774 89 aa8.41□□□□□ -1.06
SMAD9-202ENST00000379826 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.06
SMAD9-202ENST00000379826 CFAP161Q6P656 301 aa8.4□□□□□ -1.06
SMAD9-202ENST00000379826 A0A096LPF7 62 aa8.4□□□□□ -1.06
SMAD9-202ENST00000379826 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.06
SMAD9-202ENST00000379826 RMI2Q96E14 147 aa8.4□□□□□ -1.06
SMAD9-202ENST00000379826 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.07
SMAD9-202ENST00000379826 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.07
SMAD9-202ENST00000379826 TMEM243Q9BU79 118 aa8.4□□□□□ -1.07
SMAD9-202ENST00000379826 TRAV4A0A0B4J268 109 aa8.4□□□□□ -1.07
SMAD9-202ENST00000379826 TINCRA0A1B0GVN0 87 aa8.4□□□□□ -1.07
SMAD9-202ENST00000379826 K7EQG2 157 aa8.4□□□□□ -1.07
SMAD9-202ENST00000379826 UBE2D3P61077 147 aa8.4□□□□□ -1.07
SMAD9-202ENST00000379826 UBE2D2P62837 147 aa8.4□□□□□ -1.07
SMAD9-202ENST00000379826 C18orf65Q6ZTR6 163 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 SMIM20Q8N5G0 67 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 C9orf85Q96MD7 179 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 FAM236AA0A1B0GUQ0 79 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 FAM236BA0A1B0GV22 79 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 Q9HAA7 133 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 NBEAQ8NFP9 2946 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 NXPH4O95158 308 aa8.39□□□□□ -1.07
SMAD9-202ENST00000379826 K7EQD1 137 aa8.38□□□□□ -1.07
SMAD9-202ENST00000379826 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
SMAD9-202ENST00000379826 IGF2RP11717 2491 aa8.38□□□□□ -1.07
SMAD9-202ENST00000379826 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
SMAD9-202ENST00000379826 TMEM61Q8N0U2 210 aa8.38□□□□□ -1.07
SMAD9-202ENST00000379826 PRO0461Q9UI25 63 aa8.38□□□□□ -1.07
SMAD9-202ENST00000379826 HILS1P60008 231 aa8.37□□□□□ -1.07
SMAD9-202ENST00000379826 CCDC179H3BU77 68 aa8.37□□□□□ -1.07
SMAD9-202ENST00000379826 IGLV1-40P01703 118 aa8.37□□□□□ -1.07
SMAD9-202ENST00000379826 DNAJC30Q96LL9 226 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms