RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RBMY1A1P0DJD3 496 aaKnown RBP4.94□□□□□ -1.62
NEDD9-202ENST00000379446 TMEM126AQ9H061 195 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 EDA2RQ9HAV5 297 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 M0R2P5 195 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 HBDP02042 147 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 HERV-K104P63124 156 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 PGPEP1Q9NXJ5 209 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 NXPH4O95158 308 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 UBE2AP49459 152 aa4.94□□□□□ -1.62
NEDD9-202ENST00000379446 MRPL53Q96EL3 112 aaKnown RBP4.94□□□□□ -1.62
NEDD9-202ENST00000379446 MGAQ8IWI9 3026 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 SMIM9A6NGZ8 99 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 LINC00322Q6ZN03 302 aaPredicted RBP4.93□□□□□ -1.62
NEDD9-202ENST00000379446 Q86TA4 180 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 ORMDL3Q8N138 153 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 C16orf95Q9H693 158 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 UBR5O95071 2799 aaPredicted RBP4.93□□□□□ -1.62
NEDD9-202ENST00000379446 TNRC6BQ9UPQ9 1833 aaKnown RBP4.93□□□□□ -1.62
NEDD9-202ENST00000379446 IGHV3-64A0A075B6Q5 118 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 CTSGP08311 255 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 RASL11AQ6T310 242 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 VSIG2Q96IQ7 327 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 C9orf85Q96MD7 179 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 IGKV1D-37A0A075B6S9 117 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 ATP5L2Q7Z4Y8 100 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 KIR2DL5BQ8NHK3 375 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 IGLV5-52A0A0A0MRZ9 124 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 MT-ATP8P03928 68 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 LYZL1Q6UWQ5 148 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 B9D2Q9BPU9 175 aa4.93□□□□□ -1.62
NEDD9-202ENST00000379446 IGLV11-55A0A075B6I3 123 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 A0A087WZ39 114 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 TRAV8-3A0A0A6YYJ7 113 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 LYRM9A8MSI8 78 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 GHRHP01286 108 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 FAM231DQ6ZW35 169 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 C2orf91Q6ZV80 131 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 TMEM238LA0A1B0GVL6 79 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 A6NJY4 79 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 BOD1L1Q8NFC6 3051 aa4.92□□□□□ -1.62
NEDD9-202ENST00000379446 IGKCP01834 107 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 COX6CP09669 75 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 Q6ZTC4 211 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 MAP1AP78559 2803 aaPredicted RBP4.91□□□□□ -1.62
NEDD9-202ENST00000379446 LINC01549A6NIU2 74 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 IGLV2-11P01706 119 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 PSMB8P28062 276 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 PFN2P35080 140 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 SBSPONQ8IVN8 264 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 URB1-AS1Q96HZ7 61 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 LINC01545Q5VT33 79 aa4.91□□□□□ -1.62
NEDD9-202ENST00000379446 TMEM263Q8WUH6 116 aaKnown RBP4.91□□□□□ -1.62
NEDD9-202ENST00000379446 DPM2O94777 84 aa4.9□□□□□ -1.62
NEDD9-202ENST00000379446 GATA1P15976 413 aaPredicted RBP4.9□□□□□ -1.62
NEDD9-202ENST00000379446 FHL3Q13643 280 aa4.9□□□□□ -1.62
NEDD9-202ENST00000379446 DMDP11532 3685 aa4.9□□□□□ -1.62
NEDD9-202ENST00000379446 IGHV4-4A0A075B6R2 117 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 FSTL3O95633 263 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 DNAL4O96015 105 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 PDE6HQ13956 83 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 TMEM75Q8N9X5 138 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 K7EIM0 57 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 GNRH2O43555 120 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 SH2D1AO60880 128 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 NPYP01303 97 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 C12orf74Q32Q52 190 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 RNF152Q8N8N0 203 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 UBE2D4Q9Y2X8 147 aa4.9□□□□□ -1.63
NEDD9-202ENST00000379446 TENM4Q6N022 2769 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 TRBV19A0A075B6N1 114 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 F8W1H4 67 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 IGKV1-17P01599 117 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 SCGB1A1P11684 91 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 CEMP1Q6PRD7 247 aaPredicted RBP4.89□□□□□ -1.63
NEDD9-202ENST00000379446 ZNF625Q96I27 306 aaPredicted RBP4.89□□□□□ -1.63
NEDD9-202ENST00000379446 IGKV2D-26A0A0A0MRZ7 120 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 RBMY1CP0DJD4 496 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 Q6ZTI0 123 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 ZNF492Q9P255 531 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 LGALS9O00182 355 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 HLA-DRB4P13762 266 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 C5orf38Q86SI9 138 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 TRPT1Q86TN4 253 aaKnown RBP4.89□□□□□ -1.63
NEDD9-202ENST00000379446 MRPL35Q9NZE8 188 aaKnown RBP4.89□□□□□ -1.63
NEDD9-202ENST00000379446 HLA-DRB4X5D2U9 266 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 VCYO14598 125 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 TSPAN13O95857 204 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 Q6AWC8 147 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 UFSP1Q6NVU6 142 aa4.89□□□□□ -1.63
NEDD9-202ENST00000379446 SPANXB1Q9NS25 103 aaPredicted RBP4.89□□□□□ -1.63
NEDD9-202ENST00000379446 AGRNO00468 2067 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 C9JAW5 83 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 HIGD2BQ4VC39 106 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 LYPD1Q8N2G4 141 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 PTPRBP23467 1997 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 LOC400499M0QZD8 3231 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 MUC3AQ02505 3323 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 TEX22C9J3V5 150 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms