RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 COX7A2LO14548 114 aa8.28□□□□□ -1.08
HIF3A-205ENST00000377670 LINC01620Q4KN68 170 aa8.28□□□□□ -1.08
HIF3A-205ENST00000377670 C7orf33Q8WU49 177 aa8.28□□□□□ -1.08
HIF3A-205ENST00000377670 ATOX1O00244 68 aa8.27□□□□□ -1.09
HIF3A-205ENST00000377670 KLK12Q9UKR0 248 aa8.27□□□□□ -1.09
HIF3A-205ENST00000377670 DEFB105AQ8NG35 78 aa8.27□□□□□ -1.09
HIF3A-205ENST00000377670 CELSR3Q9NYQ7 3312 aa8.27□□□□□ -1.09
HIF3A-205ENST00000377670 IGLV2-18A0A075B6J9 118 aa8.27□□□□□ -1.09
HIF3A-205ENST00000377670 DEFB1P60022 68 aa8.27□□□□□ -1.09
HIF3A-205ENST00000377670 IGLV1-47P01700 117 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 BRWD1-AS2P59051 145 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 C16orf54Q6UWD8 224 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 HIGD1BQ9P298 99 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 PRO0255Q9UI72 69 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 K7EIM0 57 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 HIST2H2BDQ6DRA6 164 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 IGLV11-55A0A075B6I3 123 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 ZFP2Q6ZN57 461 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 PTH2Q96A98 100 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 RBAKDNA6NC62 111 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 NDUFA1O15239 70 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 IGKV1-17P01599 117 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 DAZ2Q13117 558 aaKnown RBP8.26□□□□□ -1.09
HIF3A-205ENST00000377670 PATE2Q6UY27 113 aa8.26□□□□□ -1.09
HIF3A-205ENST00000377670 DAZ4Q86SG3 579 aaKnown RBP8.26□□□□□ -1.09
HIF3A-205ENST00000377670 DAZ3Q9NR90 486 aaKnown RBP8.26□□□□□ -1.09
HIF3A-205ENST00000377670 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 VPS13AQ96RL7 3174 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 IGKV2-24A0A0C4DH68 120 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 SLC25A29Q8N8R3 303 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 DAND5Q8N907 189 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 LENEPQ9Y5L5 61 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 CRYGDP07320 174 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 LINC01548A6NM66 108 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 NDUFC2O95298 119 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 MBD6Q96DN6 1003 aa8.25□□□□□ -1.09
HIF3A-205ENST00000377670 IGHV4-4A0A075B6R2 117 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 A0A0J9YXV3 536 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 I3L2K1 104 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 LINC01006Q8NI28 216 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 CLEC2BQ92478 149 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 EML5Q05BV3 1969 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 SMIM9A6NGZ8 99 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 IGF1P05019 195 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 PSMB8P28062 276 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 VSIG2Q96IQ7 327 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 SPATA12Q7Z6I5 190 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 ZNF462Q96JM2 2506 aa8.24□□□□□ -1.09
HIF3A-205ENST00000377670 TMEM263Q8WUH6 116 aaKnown RBP8.23□□□□□ -1.09
HIF3A-205ENST00000377670 BAALCQ8WXS3 180 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 EYSQ5T1H1 3165 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 HERV-K104P63124 156 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 LAMA1P25391 3075 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 MTORP42345 2549 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 CTSGP08311 255 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 RPL39P62891 51 aaKnown RBP8.23□□□□□ -1.09
HIF3A-205ENST00000377670 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 TRBV10-2A0A0K0K1G8 114 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 LYRM9A8MSI8 78 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 TEX22C9J3V5 150 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 FAM222AQ5U5X8 452 aa8.23□□□□□ -1.09
HIF3A-205ENST00000377670 P0DMU3 169 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 FAM231AP0DMU4 169 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 FAM231CP0DMU5 169 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 MIFP14174 115 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 UBE2D1P51668 147 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 FN1P02751 2386 aaKnown RBP8.22□□□□□ -1.09
HIF3A-205ENST00000377670 B9D2Q9BPU9 175 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 LGALS9O00182 355 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 NUPR2A6NF83 97 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 TRBV12-3P01733 135 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 COX7B2Q8TF08 81 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 FAM167A-AS1Q96KT0 104 aa8.22□□□□□ -1.09
HIF3A-205ENST00000377670 IGHV4-28A0A0C4DH34 117 aa8.21□□□□□ -1.09
HIF3A-205ENST00000377670 HCFC1P51610 2035 aa8.21□□□□□ -1.09
HIF3A-205ENST00000377670 KRTAP10-9P60411 292 aa8.21□□□□□ -1.09
HIF3A-205ENST00000377670 WFDC9Q8NEX5 89 aa8.21□□□□□ -1.1
HIF3A-205ENST00000377670 TOMM6Q96B49 74 aa8.21□□□□□ -1.1
HIF3A-205ENST00000377670 E9PLD3 99 aa8.21□□□□□ -1.1
HIF3A-205ENST00000377670 CRYGBP07316 175 aa8.21□□□□□ -1.1
HIF3A-205ENST00000377670 ODF1Q14990 250 aa8.21□□□□□ -1.1
HIF3A-205ENST00000377670 SPEGQ15772 3267 aa8.2□□□□□ -1.1
HIF3A-205ENST00000377670 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
HIF3A-205ENST00000377670 MT-ATP8P03928 68 aa8.2□□□□□ -1.1
HIF3A-205ENST00000377670 Q6ZUT4 128 aa8.2□□□□□ -1.1
HIF3A-205ENST00000377670 H0YGX0 51 aa8.19□□□□□ -1.1
HIF3A-205ENST00000377670 PRAC2D3DTV9 90 aa8.19□□□□□ -1.1
HIF3A-205ENST00000377670 FSHBP01225 129 aa8.19□□□□□ -1.1
HIF3A-205ENST00000377670 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
HIF3A-205ENST00000377670 TCL1BO95988 128 aa8.19□□□□□ -1.1
HIF3A-205ENST00000377670 U3KQK5 164 aa8.19□□□□□ -1.1
HIF3A-205ENST00000377670 DEFB114Q30KQ6 69 aa8.19□□□□□ -1.1
HIF3A-205ENST00000377670 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
HIF3A-205ENST00000377670 TRBV7-3A0A075B6L6 115 aa8.18□□□□□ -1.1
HIF3A-205ENST00000377670 C11orf86A6NJI1 115 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms