RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 UBE2AP49459 152 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 TRAV26-1A0A087WT03 109 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 ODF1Q14990 250 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 MBD6Q96DN6 1003 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 A4D1N5 150 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 C15orf53Q8NAA6 179 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 HIGD1BQ9P298 99 aa13.4□□□□□ -0.26
CLSTN1-202ENST00000377298 FXYD2P54710 66 aa13.39□□□□□ -0.27
CLSTN1-202ENST00000377298 IGHV1-58A0A0C4DH39 117 aa13.39□□□□□ -0.27
CLSTN1-202ENST00000377298 MIFP14174 115 aa13.39□□□□□ -0.27
CLSTN1-202ENST00000377298 hADV29S1A0JD25 119 aa13.38□□□□□ -0.27
CLSTN1-202ENST00000377298 BAALC-AS2P0C853 105 aa13.37□□□□□ -0.27
CLSTN1-202ENST00000377298 C4orf48Q5BLP8 95 aa13.37□□□□□ -0.27
CLSTN1-202ENST00000377298 TTTY13Q9BZ97 58 aa13.37□□□□□ -0.27
CLSTN1-202ENST00000377298 C14orf177Q52M58 125 aa13.37□□□□□ -0.27
CLSTN1-202ENST00000377298 NTN5Q8WTR8 489 aaPredicted RBP13.37□□□□□ -0.27
CLSTN1-202ENST00000377298 DEFB131BA0A096LNP1 70 aa13.36□□□□□ -0.27
CLSTN1-202ENST00000377298 P0DMU3 169 aa13.36□□□□□ -0.27
CLSTN1-202ENST00000377298 FAM231AP0DMU4 169 aa13.36□□□□□ -0.27
CLSTN1-202ENST00000377298 FAM231CP0DMU5 169 aa13.36□□□□□ -0.27
CLSTN1-202ENST00000377298 C9orf153Q5TBE3 101 aa13.36□□□□□ -0.27
CLSTN1-202ENST00000377298 Q6ZUT4 128 aa13.36□□□□□ -0.27
CLSTN1-202ENST00000377298 OPRPNQ99935 248 aaPredicted RBP13.36□□□□□ -0.27
CLSTN1-202ENST00000377298 TINCRA0A1B0GVN0 87 aa13.35□□□□□ -0.27
CLSTN1-202ENST00000377298 AVPP01185 164 aa13.35□□□□□ -0.27
CLSTN1-202ENST00000377298 PRRC2AP48634 2157 aaKnown RBP13.35□□□□□ -0.27
CLSTN1-202ENST00000377298 NDUFS5O43920 106 aa13.35□□□□□ -0.27
CLSTN1-202ENST00000377298 GDF5OSQ5U4N7 250 aa13.35□□□□□ -0.27
CLSTN1-202ENST00000377298 LINC00482Q8N8I6 264 aa13.35□□□□□ -0.27
CLSTN1-202ENST00000377298 SPATA12Q7Z6I5 190 aa13.34□□□□□ -0.27
CLSTN1-202ENST00000377298 Q6ZS46 218 aa13.34□□□□□ -0.27
CLSTN1-202ENST00000377298 SPANXDQ9BXN6 97 aa13.34□□□□□ -0.27
CLSTN1-202ENST00000377298 H7C423 109 aa13.34□□□□□ -0.27
CLSTN1-202ENST00000377298 WFDC2Q14508 124 aa13.34□□□□□ -0.27
CLSTN1-202ENST00000377298 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
CLSTN1-202ENST00000377298 CEMP1Q6PRD7 247 aaPredicted RBP13.33□□□□□ -0.28
CLSTN1-202ENST00000377298 FUSP35637 526 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLSTN1-202ENST00000377298 CRIP1P50238 77 aa13.33□□□□□ -0.28
CLSTN1-202ENST00000377298 DAND5Q8N907 189 aa13.33□□□□□ -0.28
CLSTN1-202ENST00000377298 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
CLSTN1-202ENST00000377298 MYO9AB2RTY4 2548 aa13.32□□□□□ -0.28
CLSTN1-202ENST00000377298 H3BQ85 93 aa13.32□□□□□ -0.28
CLSTN1-202ENST00000377298 CFAP126Q5VTH2 177 aa13.31□□□□□ -0.28
CLSTN1-202ENST00000377298 TRBV6-4A0A1B0GX49 114 aa13.31□□□□□ -0.28
CLSTN1-202ENST00000377298 NDUFA7O95182 113 aa13.31□□□□□ -0.28
CLSTN1-202ENST00000377298 REG3AQ06141 175 aa13.31□□□□□ -0.28
CLSTN1-202ENST00000377298 MIR7-3HGQ8N6C7 128 aa13.31□□□□□ -0.28
CLSTN1-202ENST00000377298 PLXNB1O43157 2135 aa13.31□□□□□ -0.28
CLSTN1-202ENST00000377298 LINC00269Q8N2A0 174 aa13.3□□□□□ -0.28
CLSTN1-202ENST00000377298 NEXN-AS1Q8NBZ9 246 aa13.3□□□□□ -0.28
CLSTN1-202ENST00000377298 RS1O15537 224 aa13.3□□□□□ -0.28
CLSTN1-202ENST00000377298 G3V4G9 280 aa13.29□□□□□ -0.28
CLSTN1-202ENST00000377298 IGLV2-11P01706 119 aa13.29□□□□□ -0.28
CLSTN1-202ENST00000377298 KIAA1549Q9HCM3 1950 aa13.29□□□□□ -0.28
CLSTN1-202ENST00000377298 A0A1W2PPR1 153 aa13.29□□□□□ -0.28
CLSTN1-202ENST00000377298 CRYBA4P53673 196 aa13.29□□□□□ -0.28
CLSTN1-202ENST00000377298 C18orf65Q6ZTR6 163 aa13.29□□□□□ -0.28
CLSTN1-202ENST00000377298 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.29□□□□□ -0.28
CLSTN1-202ENST00000377298 M0QY20 66 aa13.28□□□□□ -0.28
CLSTN1-202ENST00000377298 CITED1Q99966 193 aa13.28□□□□□ -0.28
CLSTN1-202ENST00000377298 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
CLSTN1-202ENST00000377298 IGKV2-24A0A0C4DH68 120 aa13.28□□□□□ -0.28
CLSTN1-202ENST00000377298 NCR3O14931 201 aa13.28□□□□□ -0.28
CLSTN1-202ENST00000377298 CEP295Q9C0D2 2601 aa13.28□□□□□ -0.28
CLSTN1-202ENST00000377298 KIR2DL5BQ8NHK3 375 aa13.27□□□□□ -0.28
CLSTN1-202ENST00000377298 ANKRD29Q8N6D5 301 aa13.27□□□□□ -0.28
CLSTN1-202ENST00000377298 KLLNB2CW77 178 aa13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 CRYGDP07320 174 aa13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 TEN1Q86WV5 123 aa13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 DIRC1Q969H9 104 aa13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 HIST2H2BDQ6DRA6 164 aa13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 CRIP2P52943 208 aaPredicted RBP13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 UFSP1Q6NVU6 142 aa13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 DCANP1Q8TF63 244 aa13.26□□□□□ -0.29
CLSTN1-202ENST00000377298 TRBV6-8A0A0A6YYG3 113 aa13.25□□□□□ -0.29
CLSTN1-202ENST00000377298 NDUFB1O75438 58 aa13.25□□□□□ -0.29
CLSTN1-202ENST00000377298 HIGD2BQ4VC39 106 aa13.25□□□□□ -0.29
CLSTN1-202ENST00000377298 CHCHD10Q8WYQ3 142 aaPredicted RBP13.25□□□□□ -0.29
CLSTN1-202ENST00000377298 ACYP1P07311 99 aa13.24□□□□□ -0.29
CLSTN1-202ENST00000377298 WDR87Q6ZQQ6 2873 aa13.24□□□□□ -0.29
CLSTN1-202ENST00000377298 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
CLSTN1-202ENST00000377298 LINC01620Q4KN68 170 aa13.24□□□□□ -0.29
CLSTN1-202ENST00000377298 TRAV10A0A0B4J240 114 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 FOXI1Q12951 378 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 TRBV6-5A0A0K0K1A5 114 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 B5MCH6 92 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 NFE4Q86UQ8 179 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 RNF185Q96GF1 192 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 U3KQK5 164 aa13.23□□□□□ -0.29
CLSTN1-202ENST00000377298 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
CLSTN1-202ENST00000377298 RNASE3P12724 160 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-202ENST00000377298 MIAQ16674 131 aa13.22□□□□□ -0.29
CLSTN1-202ENST00000377298 TP73-AS1Q9UF72 201 aa13.22□□□□□ -0.29
CLSTN1-202ENST00000377298 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.29
CLSTN1-202ENST00000377298 ARHGAP32A7KAX9 2087 aa13.21□□□□□ -0.29
CLSTN1-202ENST00000377298 SMR3AQ99954 134 aa13.21□□□□□ -0.29
CLSTN1-202ENST00000377298 CDKN2A-AS1Q9UH64 79 aa13.21□□□□□ -0.29
CLSTN1-202ENST00000377298 TRACP01848 142 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms