RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 LRCOL1A6NCL2 159 aa9.6□□□□□ -0.87
VPS13A-204ENST00000376634 CTSGP08311 255 aa9.6□□□□□ -0.87
VPS13A-204ENST00000376634 GRNP28799 593 aaKnown RBP9.6□□□□□ -0.87
VPS13A-204ENST00000376634 BLCAPP62952 87 aa9.6□□□□□ -0.87
VPS13A-204ENST00000376634 CDPF1Q6NVV7 123 aa9.6□□□□□ -0.87
VPS13A-204ENST00000376634 E9PLD3 99 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 RITA1Q96K30 269 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 TRAV26-1A0A087WT03 109 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 IGHV4-61A0A0C4DH41 118 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 UQCRQO14949 82 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 CTSZQ9UBR2 303 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 MIAQ16674 131 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 SLX1AQ9BQ83 275 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 MED14OSP0DP75 135 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 SDIM1Q6ZPB5 146 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 GPHB5Q86YW7 130 aa9.59□□□□□ -0.87
VPS13A-204ENST00000376634 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
VPS13A-204ENST00000376634 MLST8Q9BVC4 326 aa9.58□□□□□ -0.88
VPS13A-204ENST00000376634 IGKV1-17P01599 117 aa9.58□□□□□ -0.88
VPS13A-204ENST00000376634 A6NED7 52 aa9.58□□□□□ -0.88
VPS13A-204ENST00000376634 TEX49A0A1B0GTD5 131 aa9.58□□□□□ -0.88
VPS13A-204ENST00000376634 PLA2G2CQ5R387 149 aa9.58□□□□□ -0.88
VPS13A-204ENST00000376634 LYPD6BQ8NI32 183 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 INSL3P51460 131 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 LYPD6Q86Y78 171 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 C11orf45Q8TAV5 145 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 CRYGDP07320 174 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 Q8NFD4 153 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 CHD8Q9HCK8 2581 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 PIP4P1Q86T03 277 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 NDUFA11Q86Y39 141 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 ODF1Q14990 250 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 RNASE8Q8TDE3 154 aaKnown RBP9.57□□□□□ -0.88
VPS13A-204ENST00000376634 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
VPS13A-204ENST00000376634 NDUFC1O43677 76 aa9.56□□□□□ -0.88
VPS13A-204ENST00000376634 TDRG1Q3Y452 100 aa9.56□□□□□ -0.88
VPS13A-204ENST00000376634 IGLV3-1P01715 115 aa9.56□□□□□ -0.88
VPS13A-204ENST00000376634 LINC00173Q6ZV60 143 aa9.56□□□□□ -0.88
VPS13A-204ENST00000376634 K7EMT4 169 aa9.56□□□□□ -0.88
VPS13A-204ENST00000376634 TCL1BO95988 128 aa9.56□□□□□ -0.88
VPS13A-204ENST00000376634 A0A087WZ39 114 aa9.55□□□□□ -0.88
VPS13A-204ENST00000376634 MSRB1Q9NZV6 116 aa9.55□□□□□ -0.88
VPS13A-204ENST00000376634 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
VPS13A-204ENST00000376634 C11orf53Q8IXP5 236 aa9.55□□□□□ -0.88
VPS13A-204ENST00000376634 SPANXB1Q9NS25 103 aaPredicted RBP9.55□□□□□ -0.88
VPS13A-204ENST00000376634 RSPO1Q2MKA7 263 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-204ENST00000376634 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
VPS13A-204ENST00000376634 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 PIK3CD-AS1Q5SR53 167 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 MDFICQ9P1T7 246 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 PRO0255Q9UI72 69 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 MYCNOSP40205 109 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 BPTFQ12830 3046 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 HIGD2AQ9BW72 106 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 LINC00269Q8N2A0 174 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
VPS13A-204ENST00000376634 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
VPS13A-204ENST00000376634 TMEM89A2RUT3 159 aa9.53□□□□□ -0.88
VPS13A-204ENST00000376634 HIST2H2BDQ6DRA6 164 aa9.53□□□□□ -0.88
VPS13A-204ENST00000376634 ZFAND2AQ8N6M9 145 aa9.53□□□□□ -0.88
VPS13A-204ENST00000376634 REG3AQ06141 175 aa9.53□□□□□ -0.88
VPS13A-204ENST00000376634 SPRNQ5BIV9 151 aa9.52□□□□□ -0.88
VPS13A-204ENST00000376634 Q8N9W7 124 aa9.52□□□□□ -0.88
VPS13A-204ENST00000376634 CEP295Q9C0D2 2601 aa9.52□□□□□ -0.88
VPS13A-204ENST00000376634 C7orf33Q8WU49 177 aa9.52□□□□□ -0.89
VPS13A-204ENST00000376634 FAM167A-AS1Q96KT0 104 aa9.52□□□□□ -0.89
VPS13A-204ENST00000376634 ENHOQ6UWT2 76 aa9.52□□□□□ -0.89
VPS13A-204ENST00000376634 H7C423 109 aa9.51□□□□□ -0.89
VPS13A-204ENST00000376634 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
VPS13A-204ENST00000376634 IGLC6P0CF74 106 aa9.51□□□□□ -0.89
VPS13A-204ENST00000376634 PRAC2D3DTV9 90 aa9.5□□□□□ -0.89
VPS13A-204ENST00000376634 SIRPDQ9H106 197 aa9.5□□□□□ -0.89
VPS13A-204ENST00000376634 UBE2D1P51668 147 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 HILS1P60008 231 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 UBE2D4Q9Y2X8 147 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 FAM19A1Q7Z5A9 133 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 MT-ATP8P03928 68 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 A0A0J9YX75 114 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 NRGNQ92686 78 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 PTH2Q96A98 100 aa9.49□□□□□ -0.89
VPS13A-204ENST00000376634 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
VPS13A-204ENST00000376634 LYRM9A8MSI8 78 aa9.48□□□□□ -0.89
VPS13A-204ENST00000376634 MAP6D1Q9H9H5 199 aa9.48□□□□□ -0.89
VPS13A-204ENST00000376634 NDUFA7O95182 113 aa9.48□□□□□ -0.89
VPS13A-204ENST00000376634 CHCHD10Q8WYQ3 142 aaPredicted RBP9.48□□□□□ -0.89
VPS13A-204ENST00000376634 KRTAP27-1Q3LI81 207 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 IGF2-ASQ6U949 168 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 UBE2D3P61077 147 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 A0A0J9YWU9 116 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 P0DMU3 169 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 FAM231AP0DMU4 169 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 FAM231CP0DMU5 169 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 ZFP36P26651 326 aaKnown RBP9.47□□□□□ -0.89
VPS13A-204ENST00000376634 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 ZNF524Q96C55 264 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms