RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 RHOHQ15669 191 aa13.1□□□□□ -0.31
VPS26A-202ENST00000373382 H3BMM0 161 aa13.1□□□□□ -0.31
VPS26A-202ENST00000373382 NSUN5P1Q3KNT7 163 aa13.1□□□□□ -0.31
VPS26A-202ENST00000373382 UBE2WQ96B02 151 aa13.1□□□□□ -0.31
VPS26A-202ENST00000373382 TNFRSF18Q9Y5U5 241 aa13.1□□□□□ -0.31
VPS26A-202ENST00000373382 TLN2Q9Y4G6 2542 aa13.1□□□□□ -0.31
VPS26A-202ENST00000373382 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
VPS26A-202ENST00000373382 A0A0J9YX75 114 aa13.09□□□□□ -0.31
VPS26A-202ENST00000373382 ZANQ9Y493 2812 aa13.09□□□□□ -0.31
VPS26A-202ENST00000373382 CCDC179H3BU77 68 aa13.08□□□□□ -0.32
VPS26A-202ENST00000373382 TRBV7-9A0A0J9YWB2 115 aa13.08□□□□□ -0.32
VPS26A-202ENST00000373382 COX6CP09669 75 aa13.08□□□□□ -0.32
VPS26A-202ENST00000373382 NDUFV3P56181 108 aaKnown RBP13.08□□□□□ -0.32
VPS26A-202ENST00000373382 C3orf56Q8N813 242 aa13.08□□□□□ -0.32
VPS26A-202ENST00000373382 ICOSQ9Y6W8 199 aa13.08□□□□□ -0.32
VPS26A-202ENST00000373382 PTPN13Q12923 2485 aa13.07□□□□□ -0.32
VPS26A-202ENST00000373382 FAM208BQ5VWN6 2430 aa13.06□□□□□ -0.32
VPS26A-202ENST00000373382 CACNA1AO00555 2505 aa13.06□□□□□ -0.32
VPS26A-202ENST00000373382 TRBV10-2A0A0K0K1G8 114 aa13.06□□□□□ -0.32
VPS26A-202ENST00000373382 CITED1Q99966 193 aa13.06□□□□□ -0.32
VPS26A-202ENST00000373382 A6NDX4 124 aa13.06□□□□□ -0.32
VPS26A-202ENST00000373382 NHLRC4P0CG21 123 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-202ENST00000373382 IFITM1P13164 125 aa13.06□□□□□ -0.32
VPS26A-202ENST00000373382 ACACBO00763 2458 aa13.06□□□□□ -0.32
VPS26A-202ENST00000373382 PIMREGQ9BSJ6 248 aa13.05□□□□□ -0.32
VPS26A-202ENST00000373382 RPL13AP40429 203 aaKnown RBP13.05□□□□□ -0.32
VPS26A-202ENST00000373382 H7C423 109 aa13.04□□□□□ -0.32
VPS26A-202ENST00000373382 IGHV4-59P01825 116 aa13.04□□□□□ -0.32
VPS26A-202ENST00000373382 ATP5J2P56134 94 aa13.04□□□□□ -0.32
VPS26A-202ENST00000373382 HIST2H2BDQ6DRA6 164 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 DGAT2L7PQ6IED9 249 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 ODF3Q96PU9 254 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 AVPP01185 164 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 IGHV4-30-2A0A087WSY4 118 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 GAGE12JA6NER3 117 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 GAGE7O76087 117 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 IGLV1-40P01703 118 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 GAGE12FP0CL80 117 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 GAGE12GP0CL81 117 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 GAGE12IP0CL82 117 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 GAGE4Q13068 117 aa13.03□□□□□ -0.32
VPS26A-202ENST00000373382 IGHV1-58A0A0C4DH39 117 aa13.02□□□□□ -0.32
VPS26A-202ENST00000373382 H3BUA1 57 aa13.02□□□□□ -0.32
VPS26A-202ENST00000373382 MAPK1IP1LQ8NDC0 245 aa13.02□□□□□ -0.32
VPS26A-202ENST00000373382 TRBV30A0A0K0K1B3 111 aa13.02□□□□□ -0.33
VPS26A-202ENST00000373382 DEFB131AP59861 70 aa13.02□□□□□ -0.33
VPS26A-202ENST00000373382 RBMY1A1P0DJD3 496 aaKnown RBP13.01□□□□□ -0.33
VPS26A-202ENST00000373382 RBMY1CP0DJD4 496 aa13.01□□□□□ -0.33
VPS26A-202ENST00000373382 NBL1P41271 181 aa13.01□□□□□ -0.33
VPS26A-202ENST00000373382 RBMY1FQ15415 496 aaKnown RBP13.01□□□□□ -0.33
VPS26A-202ENST00000373382 Q6ZSN1 163 aa13.01□□□□□ -0.33
VPS26A-202ENST00000373382 LITAFQ99732 161 aa13.01□□□□□ -0.33
VPS26A-202ENST00000373382 MYO18BQ8IUG5 2567 aa13.01□□□□□ -0.33
VPS26A-202ENST00000373382 IGHV3OR16-12A0A075B7B8 117 aa13.01□□□□□ -0.33
VPS26A-202ENST00000373382 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
VPS26A-202ENST00000373382 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
VPS26A-202ENST00000373382 TRGV11A0A075B6L2 103 aa13□□□□□ -0.33
VPS26A-202ENST00000373382 K7EMT4 169 aa13□□□□□ -0.33
VPS26A-202ENST00000373382 K7EQG2 157 aa13□□□□□ -0.33
VPS26A-202ENST00000373382 CCL19Q99731 98 aa13□□□□□ -0.33
VPS26A-202ENST00000373382 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
VPS26A-202ENST00000373382 FLNCQ14315 2725 aa13□□□□□ -0.33
VPS26A-202ENST00000373382 ITPR1Q14643 2758 aa12.99□□□□□ -0.33
VPS26A-202ENST00000373382 GNLYP22749 145 aa12.99□□□□□ -0.33
VPS26A-202ENST00000373382 VSIG2Q96IQ7 327 aa12.99□□□□□ -0.33
VPS26A-202ENST00000373382 SONP18583 2426 aaKnown RBP12.99□□□□□ -0.33
VPS26A-202ENST00000373382 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
VPS26A-202ENST00000373382 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
VPS26A-202ENST00000373382 JMJD1CQ15652 2540 aa12.98□□□□□ -0.33
VPS26A-202ENST00000373382 MRPS36P82909 103 aaKnown RBP12.98□□□□□ -0.33
VPS26A-202ENST00000373382 MIAQ16674 131 aa12.98□□□□□ -0.33
VPS26A-202ENST00000373382 NRGNQ92686 78 aa12.98□□□□□ -0.33
VPS26A-202ENST00000373382 CHCHD5Q9BSY4 110 aa12.98□□□□□ -0.33
VPS26A-202ENST00000373382 MSMBP08118 114 aa12.97□□□□□ -0.33
VPS26A-202ENST00000373382 DEFB112Q30KQ8 113 aa12.97□□□□□ -0.33
VPS26A-202ENST00000373382 SMIM20Q8N5G0 67 aa12.97□□□□□ -0.33
VPS26A-202ENST00000373382 FAM104AQ969W3 186 aa12.97□□□□□ -0.33
VPS26A-202ENST00000373382 SHISA2Q6UWI4 295 aa12.96□□□□□ -0.33
VPS26A-202ENST00000373382 PSMB8P28062 276 aa12.96□□□□□ -0.33
VPS26A-202ENST00000373382 LINC01587Q99440 93 aa12.96□□□□□ -0.33
VPS26A-202ENST00000373382 NDUFA7O95182 113 aa12.96□□□□□ -0.34
VPS26A-202ENST00000373382 HOXD3P31249 432 aaPredicted RBP12.96□□□□□ -0.34
VPS26A-202ENST00000373382 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.34
VPS26A-202ENST00000373382 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
VPS26A-202ENST00000373382 Q9H8V8 135 aa12.95□□□□□ -0.34
VPS26A-202ENST00000373382 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
VPS26A-202ENST00000373382 C10orf105Q8TEF2 133 aa12.94□□□□□ -0.34
VPS26A-202ENST00000373382 UBE2D4Q9Y2X8 147 aa12.94□□□□□ -0.34
VPS26A-202ENST00000373382 IGHV3-53P01767 116 aa12.93□□□□□ -0.34
VPS26A-202ENST00000373382 UCNP55089 124 aa12.93□□□□□ -0.34
VPS26A-202ENST00000373382 SLURP1P55000 103 aa12.93□□□□□ -0.34
VPS26A-202ENST00000373382 CFHR3Q02985 330 aa12.93□□□□□ -0.34
VPS26A-202ENST00000373382 C18orf65Q6ZTR6 163 aa12.93□□□□□ -0.34
VPS26A-202ENST00000373382 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
VPS26A-202ENST00000373382 CHCHD7Q9BUK0 85 aa12.92□□□□□ -0.34
VPS26A-202ENST00000373382 PYGO1Q9Y3Y4 419 aa12.92□□□□□ -0.34
VPS26A-202ENST00000373382 LST1O00453 97 aa12.92□□□□□ -0.34
VPS26A-202ENST00000373382 YAE1D1Q9NRH1 226 aa12.92□□□□□ -0.34
VPS26A-202ENST00000373382 TINCRA0A1B0GVN0 87 aa12.92□□□□□ -0.34
VPS26A-202ENST00000373382 COX6A2Q02221 97 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms